CU147315 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU147315
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionEmb:CAB89363.1
LocationChr2 : 8161138 .. 8161383 (+)
Sequence length245
The following sequences are available for this feature:

transcribed_cluster sequence

TGGTGACACTACTTTGAGCTTTGAATTGTTTTTGGCTTTGGAGGAAGAAAATCTTCTGGATGTGAGGTTGCTTTAAATGACCTCAACTTCAACTTCAGTTACTCTCCAGATGATGGATGTAGACTGGTACTTGGACTTGGTCCAACTCCAAGTGCTAACTGTGATGATTATTACATGTTGGATATAATAAGGCTAAGGCACAAGTTGCATCTCTACCAGAGGAATATCACCGAGTGACTCAGTAT
Library categoryESTs
gynoecious flower library1
BLAST of CU147315 vs. TrEMBL
Match: A0A0A0LI30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G122020 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.6e-21
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 31  FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYY 90
           FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYY
Sbjct: 32  FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYY 79

Query: 91  150
           
Sbjct: 92  79

Query: 151 175
           
Sbjct: 152 79

BLAST of CU147315 vs. TrEMBL
Match: A0A0A0LI30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G122020 PE=4 SV=1)

HSP 1 Score: 33.9 bits (76), Expect = 1.1e+02
Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 3

Query: 174 HVGYNKAKAQVASLPEE 225
           +VGYNK KAQVASLPEE
Sbjct: 80  NVGYNKTKAQVASLPEE 96


HSP 2 Score: 66.6 bits (161), Expect = 1.6e-08
Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 31  FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYYMLDIIRLRHKLH 90
           FGFGG  ++      N L    S  PDDGCRLVLGLGPTP+  CDDYY +D+ + +    
Sbjct: 32  FGFGGSNTARIVNTRNSLGVKPSNPPDDGCRLVLGLGPTPNTYCDDYYHVDVNKSKGSAT 91

Query: 91  LYQRNI 150
           +Y + +
Sbjct: 92  MYPKRL 97

Query: 151 210
           
Sbjct: 152 97

Query: 211 229
           
Sbjct: 212 97

BLAST of CU147315 vs. TrEMBL
Match: A5B6J0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015279 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-08
Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 31  FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYYMLDIIRLRHKLH 90
           FGFGG  ++      N L    S  PDDGCRLVLGLGPTP+  CDDYY +D+ + +    
Sbjct: 32  FGFGGSNTARIVNTRNSLGVKPSNPPDDGCRLVLGLGPTPNTYCDDYYHVDVNKSKGSAT 91

Query: 91  LYQRNI 150
           +Y + +
Sbjct: 92  MYPKRL 97

Query: 151 210
           
Sbjct: 152 97

Query: 211 229
           
Sbjct: 212 97

BLAST of CU147315 vs. TrEMBL
Match: B9RIZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1752370 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-07
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 1

Query: 37  FGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYYML 96
           +GG   +G E   ++L  +F+  PDDGC+LVLGLGPTP+A CDDYY +
Sbjct: 34  YGGTNMNGFECTQSNLKVDFTNGPDDGCKLVLGLGPTPTAYCDDYYSM 81

Query: 97  156
           
Sbjct: 94  81

Query: 157 181
           
Sbjct: 154 81

BLAST of CU147315 vs. TrEMBL
Match: B9GZS4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s01750g PE=4 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-07
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 1

Query: 34  GFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYYMLDI 93
           G+GG  S+  E A N+L  +FS   DDGC+LVLGLGPTPSA  DD Y L +
Sbjct: 33  GYGGSSSTNAEGAQNNLKVDFSNGSDDGCKLVLGLGPTPSAYFDDCYCLGV 83

Query: 94  153
           
Sbjct: 93  83

Query: 154 187
           
Sbjct: 153 83

BLAST of CU147315 vs. NCBI nr
Match: gi|449442343|ref|XP_004138941.1| (PREDICTED: delta-like protein C [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 7.9e-22
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 1

Query: 31  FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYY 90
           FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYY
Sbjct: 32  FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYY 79

Query: 91  150
           
Sbjct: 92  79

Query: 151 175
           
Sbjct: 152 79

BLAST of CU147315 vs. NCBI nr
Match: gi|659114614|ref|XP_008457144.1| (PREDICTED: uncharacterized protein LOC103496890 [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-20
Identity = 46/48 (95.83%), Postives = 47/48 (97.92%), Query Frame = 1

Query: 31  FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYY 90
           FGFG RKSSGCEVALNDLNFNFSY+PDDGCRLVLGLGPTPSANCDDYY
Sbjct: 32  FGFGVRKSSGCEVALNDLNFNFSYAPDDGCRLVLGLGPTPSANCDDYY 79

Query: 91  150
           
Sbjct: 92  79

Query: 151 175
           
Sbjct: 152 79

BLAST of CU147315 vs. NCBI nr
Match: gi|147858797|emb|CAN82910.1| (hypothetical protein VITISV_015279 [Vitis vinifera])

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-09
Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 31  FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYYMLDIIRLRHKLH 90
           FGFGG  ++      N L    S  PDDGCRLVLGLGPTP+  CDDYY +D+ + +    
Sbjct: 32  FGFGGSNTARIVNTRNSLGVKPSNPPDDGCRLVLGLGPTPNTYCDDYYHVDVNKSKGSAT 91

Query: 91  LYQRNI 150
           +Y + +
Sbjct: 92  MYPKRL 97

Query: 151 210
           
Sbjct: 152 97

Query: 211 229
           
Sbjct: 212 97

BLAST of CU147315 vs. NCBI nr
Match: gi|296086804|emb|CBI32953.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-09
Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 31  FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYYMLDIIRLRHKLH 90
           FGFGG  ++      N L    S  PDDGCRLVLGLGPTP+  CDDYY +D+ + +    
Sbjct: 32  FGFGGSNTARIVNTRNSLGVKPSNPPDDGCRLVLGLGPTPNTYCDDYYHVDVNKSKGSAT 91

Query: 91  LYQRNI 150
           +Y + +
Sbjct: 92  MYPKRL 97

Query: 151 210
           
Sbjct: 152 97

Query: 211 229
           
Sbjct: 212 97

BLAST of CU147315 vs. NCBI nr
Match: gi|359494917|ref|XP_002271060.2| (PREDICTED: uncharacterized protein LOC100249189 [Vitis vinifera])

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-09
Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1

Query: 31  FGFGGRKSSGCEVALNDLNFNFSYSPDDGCRLVLGLGPTPSANCDDYYMLDIIRLRHKLH 90
           FGFGG  ++      N L    S  PDDGCRLVLGLGPTP+  CDDYY +D+ + +    
Sbjct: 32  FGFGGSNTARIVNTRNSLGVKPSNPPDDGCRLVLGLGPTPNTYCDDYYHVDVNKSKGSAT 91

Query: 91  LYQRNI 150
           +Y + +
Sbjct: 92  MYPKRL 97

Query: 151 210
           
Sbjct: 152 97

Query: 211 229
           
Sbjct: 212 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LI30_CUCSA3.6e-21100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G122020 PE=4 SV=1[more]
A0A0A0LI30_CUCSA1.1e+0288.24Uncharacterized protein OS=Cucumis sativus GN=Csa_2G122020 PE=4 SV=1[more]
A5B6J0_VITVI1.6e-0845.45Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015279 PE=4 SV=1[more]
B9RIZ1_RICCO1.3e-0754.17Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1752370 PE=4 SV=1[more]
B9GZS4_POPTR3.8e-0756.86Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s01750g PE=4 SV=2[more]
Match NameE-valueIdentityDescription
gi|449442343|ref|XP_004138941.1|7.9e-22100.00PREDICTED: delta-like protein C [Cucumis sativus][more]
gi|659114614|ref|XP_008457144.1|2.0e-2095.83PREDICTED: uncharacterized protein LOC103496890 [Cucumis melo][more]
gi|147858797|emb|CAN82910.1|2.6e-0945.45hypothetical protein VITISV_015279 [Vitis vinifera][more]
gi|296086804|emb|CBI32953.3|2.6e-0945.45unnamed protein product [Vitis vinifera][more]
gi|359494917|ref|XP_002271060.2|2.6e-0945.45PREDICTED: uncharacterized protein LOC100249189 [Vitis vinifera][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G122020Csa2G122020gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0146814G0146814EST