CU146762 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU146762
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRan GTPase binding protein, putative
LocationChr2 : 7729857 .. 7730225 (+)
Sequence length214
The following sequences are available for this feature:

transcribed_cluster sequence

GGGCCAGAACTGGAAATATCCATTATAAATCTAATGGTGTTATGGACAAAGAGACGTGGGTTCCAAAATTGCAAGCAACACTCTCCAGACTTTCATCTTTTGGTGCTATTAATAACACTGAAAGCATGCACTCCAGATTAGCTTCTCGGGCAAACATCTCCTGTATTGGGAACTTCAAGCCCGATTCGATCATCTGAAGATTTTTCAGAGGATT
Library categoryESTs
gynoecious flower library1
BLAST of CU146762 vs. TrEMBL
Match: A0A0A0LHX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G109700 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.8e-20
Identity = 51/60 (85.00%), Postives = 52/60 (86.67%), Query Frame = 3

Query: 3   ARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINNTESMHSRLASRANISCIGNFKP 62
           ARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINN ESMHSRLASRA    +G   P
Sbjct: 719 ARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINNAESMHSRLASRATSPVLGTSSP 778

Query: 63  122
           
Sbjct: 779 778

Query: 123 182
           
Sbjct: 839 778

BLAST of CU146762 vs. TrEMBL
Match: A0A0A0LHX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G109700 PE=4 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 2.1e-01
Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = 1

Query: 154 TSPVLGTSSPIRSSEDFSED 213
           TSPVLGTSSPIRSSEDFSED
Sbjct: 769 TSPVLGTSSPIRSSEDFSED 788

BLAST of CU146762 vs. NCBI nr
Match: gi|700206274|gb|KGN61393.1| (hypothetical protein Csa_2G109700 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 3.8e-20
Identity = 51/60 (85.00%), Postives = 52/60 (86.67%), Query Frame = 3

Query: 3   ARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINNTESMHSRLASRANISCIGNFKP 62
           ARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINN ESMHSRLASRA    +G   P
Sbjct: 719 ARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINNAESMHSRLASRATSPVLGTSSP 778

Query: 63  122
           
Sbjct: 779 778

Query: 123 182
           
Sbjct: 839 778

BLAST of CU146762 vs. NCBI nr
Match: gi|659082149|ref|XP_008441693.1| (PREDICTED: uncharacterized protein LOC103485768 isoform X2 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 3.2e-19
Identity = 48/60 (80.00%), Postives = 52/60 (86.67%), Query Frame = 3

Query: 3   ARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINNTESMHSRLASRANISCIGNFKP 62
           ARTGN+HYKSNGVMDKETWVPKLQATLSRLSSFGA+NN ES+HSRLASRA    +G   P
Sbjct: 719 ARTGNMHYKSNGVMDKETWVPKLQATLSRLSSFGAVNNAESVHSRLASRATSPVLGTSSP 778

Query: 63  122
           
Sbjct: 779 778

Query: 123 182
           
Sbjct: 839 778

BLAST of CU146762 vs. NCBI nr
Match: gi|659082151|ref|XP_008441694.1| (PREDICTED: uncharacterized protein LOC103485768 isoform X3 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 3.2e-19
Identity = 48/60 (80.00%), Postives = 52/60 (86.67%), Query Frame = 3

Query: 3   ARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINNTESMHSRLASRANISCIGNFKP 62
           ARTGN+HYKSNGVMDKETWVPKLQATLSRLSSFGA+NN ES+HSRLASRA    +G   P
Sbjct: 577 ARTGNMHYKSNGVMDKETWVPKLQATLSRLSSFGAVNNAESVHSRLASRATSPVLGTSSP 636

Query: 63  122
           
Sbjct: 637 636

Query: 123 182
           
Sbjct: 697 636

BLAST of CU146762 vs. NCBI nr
Match: gi|659082153|ref|XP_008441696.1| (PREDICTED: uncharacterized protein LOC103485768 isoform X4 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 3.2e-19
Identity = 48/60 (80.00%), Postives = 52/60 (86.67%), Query Frame = 3

Query: 3   ARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINNTESMHSRLASRANISCIGNFKP 62
           ARTGN+HYKSNGVMDKETWVPKLQATLSRLSSFGA+NN ES+HSRLASRA    +G   P
Sbjct: 575 ARTGNMHYKSNGVMDKETWVPKLQATLSRLSSFGAVNNAESVHSRLASRATSPVLGTSSP 634

Query: 63  122
           
Sbjct: 635 634

Query: 123 182
           
Sbjct: 695 634

BLAST of CU146762 vs. NCBI nr
Match: gi|659082147|ref|XP_008441692.1| (PREDICTED: uncharacterized protein LOC103485768 isoform X1 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 3.2e-19
Identity = 48/60 (80.00%), Postives = 52/60 (86.67%), Query Frame = 3

Query: 3   ARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGAINNTESMHSRLASRANISCIGNFKP 62
           ARTGN+HYKSNGVMDKETWVPKLQATLSRLSSFGA+NN ES+HSRLASRA    +G   P
Sbjct: 719 ARTGNMHYKSNGVMDKETWVPKLQATLSRLSSFGAVNNAESVHSRLASRATSPVLGTSSP 778

Query: 63  122
           
Sbjct: 779 778

Query: 123 182
           
Sbjct: 839 778

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LHX9_CUCSA5.8e-2085.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G109700 PE=4 SV=1[more]
A0A0A0LHX9_CUCSA2.1e-01100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G109700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700206274|gb|KGN61393.1|3.8e-2085.00hypothetical protein Csa_2G109700 [Cucumis sativus][more]
gi|659082149|ref|XP_008441693.1|3.2e-1980.00PREDICTED: uncharacterized protein LOC103485768 isoform X2 [Cucumis melo][more]
gi|659082151|ref|XP_008441694.1|3.2e-1980.00PREDICTED: uncharacterized protein LOC103485768 isoform X3 [Cucumis melo][more]
gi|659082153|ref|XP_008441696.1|3.2e-1980.00PREDICTED: uncharacterized protein LOC103485768 isoform X4 [Cucumis melo][more]
gi|659082147|ref|XP_008441692.1|3.2e-1980.00PREDICTED: uncharacterized protein LOC103485768 isoform X1 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G109700Csa2G109700gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0141513G0141513EST