CU146670 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU146670
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 1496661 .. 1496806 (-)
Sequence length146
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GTGTTCATATGCTAAGAACAGAGCATATTTCAAGACGTATAGATAAGGATAAATTCTTGCCACTCCTTGCATACGAGGTTAATATTTTCTCATAAATAGTAGATGCTGGGAGGCAGTGGTGTTACTCCTATAAAATAAATTAAAAG
Library
Library categoryESTs
gynoecious flower library1
Homology
[Close]
BLAST of CU146670 vs. TrEMBL
Match: A0A0A0KIV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G045020 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 7.3e-06
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3 

Query: 3   VHMLRTEHISRRIDKDKFLPLLAYEVNIFS 62
           VHMLRTEHISRRIDKDKFLPLLAYEV + S
Sbjct: 264 VHMLRTEHISRRIDKDKFLPLLAYEVCVVS 293

Query: 63   93
           
Sbjct: 324  293

[Close]
BLAST of CU146670 vs. NCBI nr
Match: gi|778698196|ref|XP_011654481.1| (PREDICTED: uncharacterized protein LOC101219169 isoform X1 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 4.7e-06
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3 

Query: 3   VHMLRTEHISRRIDKDKFLPLLAYEVNIFS 62
           VHMLRTEHISRRIDKDKFLPLLAYEV + S
Sbjct: 264 VHMLRTEHISRRIDKDKFLPLLAYEVCVVS 293

Query: 63   93
           
Sbjct: 324  293

[Close]
BLAST of CU146670 vs. NCBI nr
Match: gi|700194473|gb|KGN49650.1| (hypothetical protein Csa_5G045020 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 4.7e-06
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3 

Query: 3   VHMLRTEHISRRIDKDKFLPLLAYEVNIFS 62
           VHMLRTEHISRRIDKDKFLPLLAYEV + S
Sbjct: 264 VHMLRTEHISRRIDKDKFLPLLAYEVCVVS 293

Query: 63   93
           
Sbjct: 324  293

[Close]
BLAST of CU146670 vs. NCBI nr
Match: gi|659098640|ref|XP_008450239.1| (PREDICTED: uncharacterized protein LOC103491903 isoform X1 [Cucumis melo])

HSP 1 Score: 58.2 bits (139), Expect = 4.7e-06
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3 

Query: 3   VHMLRTEHISRRIDKDKFLPLLAYEVNIFS 62
           VHMLRTEHISRRIDKDKFLPLLAYEV + S
Sbjct: 265 VHMLRTEHISRRIDKDKFLPLLAYEVCVVS 294

Query: 63   93
           
Sbjct: 325  294

[Close]
BLAST of CU146670 vs. NCBI nr
Match: gi|778698200|ref|XP_011654482.1| (PREDICTED: uncharacterized protein LOC101219169 isoform X2 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 4.7e-06
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3 

Query: 3   VHMLRTEHISRRIDKDKFLPLLAYEVNIFS 62
           VHMLRTEHISRRIDKDKFLPLLAYEV + S
Sbjct: 264 VHMLRTEHISRRIDKDKFLPLLAYEVCVVS 293

Query: 63   93
           
Sbjct: 324  293

[Close]
BLAST of CU146670 vs. NCBI nr
Match: gi|659098644|ref|XP_008450240.1| (PREDICTED: uncharacterized protein LOC103491903 isoform X2 [Cucumis melo])

HSP 1 Score: 58.2 bits (139), Expect = 4.7e-06
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 3 

Query: 3   VHMLRTEHISRRIDKDKFLPLLAYEVNIFS 62
           VHMLRTEHISRRIDKDKFLPLLAYEV + S
Sbjct: 265 VHMLRTEHISRRIDKDKFLPLLAYEVCVVS 294

Query: 63   93
           
Sbjct: 325  294

The following BLAST results are available for this feature:
BLAST of CU146670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIV2_CUCSA7.3e-0690.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G045020 PE=4 SV=1[more]
BLAST of CU146670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778698196|ref|XP_011654481.1|4.7e-0690.00PREDICTED: uncharacterized protein LOC101219169 isoform X1 [Cucumis sativus][more]
gi|700194473|gb|KGN49650.1|4.7e-0690.00hypothetical protein Csa_5G045020 [Cucumis sativus][more]
gi|659098640|ref|XP_008450239.1|4.7e-0690.00PREDICTED: uncharacterized protein LOC103491903 isoform X1 [Cucumis melo][more]
gi|778698200|ref|XP_011654482.1|4.7e-0690.00PREDICTED: uncharacterized protein LOC101219169 isoform X2 [Cucumis sativus][more]
gi|659098644|ref|XP_008450240.1|4.7e-0690.00PREDICTED: uncharacterized protein LOC103491903 isoform X2 [Cucumis melo][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa5G045020Csa5G045020gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0140685G0140685EST