CU146366 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU146366
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Peroxidase
Location	Chr1 : 7842315 .. 7844106 (-)
Sequence length	213

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GGAAAAGGATGCAGTGGACAATAAAAGGGCTGAGACCTGAGGCGTTTGAAAGCATCAAGAAAGCAAAAGGCGTTGGTTGAGAGCAAAATGCCCTGGCGTTGTGTCTTGTGCTGACATCCTAGCAATCGCAGCCAGAGATTTTGTCCATTTGGCAGGAGGGCCGTATTACCCGGTGAAGAAGGGACGATGGGACGGGAAGATCTCCATGGCGTC

Library


Library category	ESTs
gynoecious flower library	1

Homology

[Close]

BLAST of CU146366 vs. Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.1e-15
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           E++A +NK     G     ++K   + + CP +VSC+DILAIAARDF+HLAGGPYY VKK
Sbjct: 106 EREAYENKELREEGFDSIIKAKAL-VESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKK 165

Query: 62  GRWDGKISMA 121
           GRWDGK S A
Sbjct: 166 GRWDGKRSTA 174

Query: 122  181
           
Sbjct: 226  174

Query: 182  212
           
Sbjct: 286  174

[Close]

BLAST of CU146366 vs. Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.9e-12
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 2


Query: 59  ESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKKGRWDGKISMA 118
           E  +  L   CP  VSCADILA+AARDFVHLAGGP++PV  GR DG+IS+A
Sbjct: 109 EEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLA 159

Query: 119  178
           
Sbjct: 169  159

Query: 179  212
           
Sbjct: 229  159

[Close]

BLAST of CU146366 vs. Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 4.6e-10
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 2


Query: 86  KCPGVVSCADILAIAARDFVHLAGGPYYPVKKGRWDGKIS 145
           +CPGVVSCADI+A+AARD V  AGGPYY + KGR+DGK S
Sbjct: 124 RCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRS 163

Query: 146  205
           
Sbjct: 184  163

[Close]

BLAST of CU146366 vs. Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.0e-10
Identity = 37/70 (52.86%), Postives = 44/70 (62.86%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDA DNK     G     ++K   + ++CPGVVSCADILA+AARD V L GGP + V+ 
Sbjct: 93  EKDADDNKSLAGDGFDTVIKAKTA-VESQCPGVVSCADILALAARDVVVLVGGPEFKVEL 152

Query: 62  GRWDGKISMA 121
           GR DG +S A
Sbjct: 153 GRRDGLVSKA 161

Query: 122  181
           
Sbjct: 213  161

Query: 182  212
           
Sbjct: 273  161

[Close]

BLAST of CU146366 vs. Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.0e-09
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 2


Query: 59  ESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKKGRWDGKISMA 118
           ++ ++ L  +CPG+VSCADIL++AARD V L+GGP + V KGR DG+IS A
Sbjct: 101 DNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISKA 151

Query: 119  178
           
Sbjct: 161  151

Query: 179  212
           
Sbjct: 221  151

[Close]

BLAST of CU146366 vs. TrEMBL
Match: A0A0A0LXH6_CUCSA (Peroxidase OS=Cucumis sativus GN=Csa_1G077120 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.4e-19
Identity = 51/70 (72.86%), Postives = 56/70 (80.00%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDAVDNK          +++K   + +KCPGVVSCADILAIAARDFVHLAGGPYYPVKK
Sbjct: 118 EKDAVDNKGLRPEAFESIKKAKAL-VESKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 177

Query: 62  GRWDGKISMA 121
           GRWDGKISMA
Sbjct: 178 GRWDGKISMA 186

Query: 122  181
           
Sbjct: 238  186

Query: 182  212
           
Sbjct: 298  186

[Close]

BLAST of CU146366 vs. TrEMBL
Match: A0A0D2S2G1_GOSRA (Peroxidase OS=Gossypium raimondii GN=B456_009G165100 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-17
Identity = 48/70 (68.57%), Postives = 54/70 (77.14%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDA DN+   T G      +K   + +KCPG+VSCADILAIAARDF+HLAGGPYY VKK
Sbjct: 113 EKDAADNRDLRTEGFDTITRAKAL-VESKCPGIVSCADILAIAARDFIHLAGGPYYVVKK 172

Query: 62  GRWDGKISMA 121
           GRWDGKISMA
Sbjct: 173 GRWDGKISMA 181

Query: 122  181
           
Sbjct: 233  181

Query: 182  212
           
Sbjct: 293  181

[Close]

BLAST of CU146366 vs. TrEMBL
Match: A0A061GFA2_THECC (Peroxidase (Fragment) OS=Theobroma cacao GN=TCM_029767 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.1e-17
Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDA DNK   T G      +K   + +KCPGVVSCADILAIAARDFVHLAGGPYY VKK
Sbjct: 169 EKDAEDNKDLRTEGFDTITRAKTL-VESKCPGVVSCADILAIAARDFVHLAGGPYYQVKK 228

Query: 62  GRWDGKISMA 121
           GRWDGKIS A
Sbjct: 229 GRWDGKISKA 237

Query: 122  181
           
Sbjct: 289  237

Query: 182  212
           
Sbjct: 349  237

[Close]

BLAST of CU146366 vs. TrEMBL
Match: A0A061GEV3_THECC (Peroxidase OS=Theobroma cacao GN=TCM_029767 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.1e-17
Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDA DNK   T G      +K   + +KCPGVVSCADILAIAARDFVHLAGGPYY VKK
Sbjct: 107 EKDAEDNKDLRTEGFDTITRAKTL-VESKCPGVVSCADILAIAARDFVHLAGGPYYQVKK 166

Query: 62  GRWDGKISMA 121
           GRWDGKIS A
Sbjct: 167 GRWDGKISKA 175

Query: 122  181
           
Sbjct: 227  175

Query: 182  212
           
Sbjct: 287  175

[Close]

BLAST of CU146366 vs. TrEMBL
Match: O82477_MANES (Peroxidase (Fragment) OS=Manihot esculenta PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.7e-17
Identity = 49/70 (70.00%), Postives = 54/70 (77.14%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDA DNK     G    + +K   + +KCPGVVSCADILAIAARD+VHLAGGPYY VKK
Sbjct: 29  EKDAEDNKDLRVEGCESIRMAKAL-VESKCPGVVSCADILAIAARDYVHLAGGPYYQVKK 88

Query: 62  GRWDGKISMA 121
           GRWDGKISMA
Sbjct: 89  GRWDGKISMA 97

Query: 122  181
           
Sbjct: 149  97

Query: 182  212
           
Sbjct: 209  97

[Close]

BLAST of CU146366 vs. NCBI nr
Match: gi|449462103|ref|XP_004148781.1| (PREDICTED: peroxidase 19 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-19
Identity = 51/70 (72.86%), Postives = 56/70 (80.00%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDAVDNK          +++K   + +KCPGVVSCADILAIAARDFVHLAGGPYYPVKK
Sbjct: 106 EKDAVDNKGLRPEAFESIKKAKAL-VESKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 165

Query: 62  GRWDGKISMA 121
           GRWDGKISMA
Sbjct: 166 GRWDGKISMA 174

Query: 122  181
           
Sbjct: 226  174

Query: 182  212
           
Sbjct: 286  174

[Close]

BLAST of CU146366 vs. NCBI nr
Match: gi|700209615|gb|KGN64711.1| (hypothetical protein Csa_1G077120 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-19
Identity = 51/70 (72.86%), Postives = 56/70 (80.00%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDAVDNK          +++K   + +KCPGVVSCADILAIAARDFVHLAGGPYYPVKK
Sbjct: 118 EKDAVDNKGLRPEAFESIKKAKAL-VESKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 177

Query: 62  GRWDGKISMA 121
           GRWDGKISMA
Sbjct: 178 GRWDGKISMA 186

Query: 122  181
           
Sbjct: 238  186

Query: 182  212
           
Sbjct: 298  186

[Close]

BLAST of CU146366 vs. NCBI nr
Match: gi|659068140|ref|XP_008442954.1| (PREDICTED: peroxidase 19 [Cucumis melo])

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-19
Identity = 51/70 (72.86%), Postives = 56/70 (80.00%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDAVDNK          +++K   + +KCPGVVSCADILAIAARDFVHLAGGPYYPVKK
Sbjct: 106 EKDAVDNKGLRPEAFESIKKAKAL-VESKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 165

Query: 62  GRWDGKISMA 121
           GRWDGKISMA
Sbjct: 166 GRWDGKISMA 174

Query: 122  181
           
Sbjct: 226  174

Query: 182  212
           
Sbjct: 286  174

[Close]

BLAST of CU146366 vs. NCBI nr
Match: gi|823230801|ref|XP_012448119.1| (PREDICTED: peroxidase 19 [Gossypium raimondii])

HSP 1 Score: 99.0 bits (245), Expect = 3.5e-18
Identity = 48/70 (68.57%), Postives = 54/70 (77.14%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDA DN+   T G      +K   + +KCPG+VSCADILAIAARDF+HLAGGPYY VKK
Sbjct: 113 EKDAADNRDLRTEGFDTITRAKAL-VESKCPGIVSCADILAIAARDFIHLAGGPYYVVKK 172

Query: 62  GRWDGKISMA 121
           GRWDGKISMA
Sbjct: 173 GRWDGKISMA 181

Query: 122  181
           
Sbjct: 233  181

Query: 182  212
           
Sbjct: 293  181

[Close]

BLAST of CU146366 vs. NCBI nr
Match: gi|590623993|ref|XP_007025479.1| (Peroxidase 19, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 98.2 bits (243), Expect = 6.0e-18
Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 2


Query: 2   EKDAVDNKRAET*GV*KHQESKRRWLRAKCPGVVSCADILAIAARDFVHLAGGPYYPVKK 61
           EKDA DNK   T G      +K   + +KCPGVVSCADILAIAARDFVHLAGGPYY VKK
Sbjct: 107 EKDAEDNKDLRTEGFDTITRAKTL-VESKCPGVVSCADILAIAARDFVHLAGGPYYQVKK 166

Query: 62  GRWDGKISMA 121
           GRWDGKIS A
Sbjct: 167 GRWDGKISKA 175

Query: 122  181
           
Sbjct: 227  175

Query: 182  212
           
Sbjct: 287  175

The following BLAST results are available for this feature:

BLAST of CU146366 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PER19_ARATH	8.1e-15	57.14	Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1	[more]
PER70_ARATH	4.9e-12	64.71	Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1	[more]
PER47_ARATH	4.6e-10	72.50	Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=2	[more]
PER55_ARATH	6.0e-10	52.86	Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1	[more]
PER64_ARATH	1.0e-09	56.86	Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1	[more]

BLAST of CU146366 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXH6_CUCSA	8.4e-19	72.86	Peroxidase OS=Cucumis sativus GN=Csa_1G077120 PE=3 SV=1	[more]
A0A0D2S2G1_GOSRA	1.2e-17	68.57	Peroxidase OS=Gossypium raimondii GN=B456_009G165100 PE=3 SV=1	[more]
A0A061GFA2_THECC	2.1e-17	71.43	Peroxidase (Fragment) OS=Theobroma cacao GN=TCM_029767 PE=3 SV=1	[more]
A0A061GEV3_THECC	2.1e-17	71.43	Peroxidase OS=Theobroma cacao GN=TCM_029767 PE=3 SV=1	[more]
O82477_MANES	2.7e-17	70.00	Peroxidase (Fragment) OS=Manihot esculenta PE=3 SV=1	[more]

BLAST of CU146366 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462103\|ref\|XP_004148781.1\|	2.4e-19	72.86	PREDICTED: peroxidase 19 [Cucumis sativus]	[more]
gi\|700209615\|gb\|KGN64711.1\|	2.4e-19	72.86	hypothetical protein Csa_1G077120 [Cucumis sativus]	[more]
gi\|659068140\|ref\|XP_008442954.1\|	2.4e-19	72.86	PREDICTED: peroxidase 19 [Cucumis melo]	[more]
gi\|823230801\|ref\|XP_012448119.1\|	3.5e-18	68.57	PREDICTED: peroxidase 19 [Gossypium raimondii]	[more]
gi\|590623993\|ref\|XP_007025479.1\|	6.0e-18	71.43	Peroxidase 19, putative isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000823	Peroxidase_pln
IPR002016	Haem_peroxidase_pln/fun/bac
IPR010255	Haem_peroxidase

Vocabulary: **Molecular Function**
Term	Definition
GO:0004601	peroxidase activity
GO:0020037	heme binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006979	response to oxidative stress
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006979	response to oxidative stress
molecular_function	GO:0020037	heme binding
molecular_function	GO:0004601	peroxidase activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G077120	Csa1G077120	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
G0137691	G0137691	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000823	Plant peroxidase	PRINTS	PR00461	PLPEROXIDASE	coord: 53..68 score: 1.1E-5coord: 34..44 score: 1.
IPR002016	Haem peroxidase, plant/fungal/bacterial	PRINTS	PR00458	PEROXIDASE	coord: 35..52 score: 1.8E-8coord: 53..65 score: 1.
IPR002016	Haem peroxidase, plant/fungal/bacterial	PFAM	PF00141	peroxidase	coord: 14..71 score: 4.2
IPR002016	Haem peroxidase, plant/fungal/bacterial	PROFILE	PS50873	PEROXIDASE_4	coord: 14..72 score: 17
IPR010255	Haem peroxidase	unknown	SSF48113	Heme-dependent peroxidases	coord: 31..72 score: 1.92
None	No IPR available	GENE3D	G3DSA:1.10.520.10		coord: 14..67 score: 1.4
None	No IPR available	PANTHER	PTHR31235	FAMILY NOT NAMED	coord: 14..72 score: 9.0
None	No IPR available	PANTHER	PTHR31235:SF56	PEROXIDASE 19	coord: 14..72 score: 9.0