CU145174 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU145174
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	GDSL esterase/lipase
Location	Chr7 : 19004049 .. 19004392 (+)
Sequence length	240

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CAAAAGCAGCTATCCGGTCTCAAACTCGTTGTCTTCGACGTTTTCAAACCTTTATACGATGCTATCATGTCTCCATCCACTCATGGGTTCGATGAAGTGAGAAAAGGGTGTTGTAGCACTGGGGCTGTGGAGACGGTATCAGTCTTGTGCAATCCAAAGTTCCATGAAACATGTTCTAAATGTAACCAAATATATGTTCTGGGACAGTATTCATCTATCAGAGGCTGCCAATCAGGTGCT

Library


Library category	ESTs
gynoecious flower library	1

Homology

[Close]

BLAST of CU145174 vs. Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-16
Identity = 38/63 (60.32%), Postives = 42/63 (66.67%), Query Frame = 1


Query: 1   QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
           QKQ S LK+VVFD++ PLYD + +PS  GF E  KGCC TG VET S+LCNPK   TCS 
Sbjct: 261 QKQYSDLKIVVFDIYSPLYDLVQNPSKSGFTEATKGCCGTGTVETTSLLCNPKSFGTCSN 320

Query: 61  CNQ 120
             Q
Sbjct: 321 ATQ 323

Query: 121  180
           
Sbjct: 381  323

Query: 181  190
           
Sbjct: 441  323

HSP 2 Score: 36.6 bits (83), Expect = 1.5e-01
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2


Query: 179 NVTKYMFWDSIHLSEAANQV 238
           N T+Y+FWDS+H SEAAN++
Sbjct: 320 NATQYVFWDSVHPSEAANEI 339

[Close]

BLAST of CU145174 vs. Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=3 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 7.3e-12
Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 1


Query: 1   QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
           ++ L GL LVVFD+++PLYD    PS  GF E R+ CC TG +ET S+LCNPK   TC+ 
Sbjct: 271 KRNLIGLNLVVFDIYQPLYDLATRPSEFGFAEARRACCGTGLLET-SILCNPKSVGTCNN 330

Query: 61  CNQ 120
             +
Sbjct: 331 ATE 332

Query: 121  180
           
Sbjct: 391  332

Query: 181  190
           
Sbjct: 451  332

HSP 2 Score: 32.3 bits (72), Expect = 2.9e+00
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2


Query: 179 NVTKYMFWDSIHLSEAANQV 238
           N T+Y+FWD  H +EAAN++
Sbjct: 329 NATEYVFWDGFHPTEAANKI 348

[Close]

BLAST of CU145174 vs. Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.5e-09
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 1


Query: 7   QLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCS 66
            L GLKLVVFD++ PL +  M+P  +GF E R+ CC TG VET S LCN +   TCS
Sbjct: 265 NLPGLKLVVFDIYNPLLNMAMNPVENGFFESRRACCGTGTVET-SFLCNARSVGTCS 320

Query: 67   126
           
Sbjct: 325  320

Query: 127  178
           
Sbjct: 385  320

HSP 2 Score: 33.5 bits (75), Expect = 1.3e+00
Identity = 13/20 (65.00%), Postives = 14/20 (70.00%), Query Frame = 2


Query: 179 NVTKYMFWDSIHLSEAANQV 238
           N T Y+FWD  H SEAAN+V
Sbjct: 321 NATNYVFWDGFHPSEAANRV 340

[Close]

BLAST of CU145174 vs. Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.6e-09
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 1


Query: 7   QLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCS 66
            L GLKLVVFD++ PL + +++P  +GF E R+ CC TG +ET S LCN     TCS
Sbjct: 264 NLPGLKLVVFDIYNPLLNMVINPVEYGFFESRRACCGTGTMET-SFLCNALSVGTCS 319

Query: 67   126
           
Sbjct: 324  319

Query: 127  178
           
Sbjct: 384  319

HSP 2 Score: 33.5 bits (75), Expect = 1.3e+00
Identity = 13/20 (65.00%), Postives = 14/20 (70.00%), Query Frame = 2


Query: 179 NVTKYMFWDSIHLSEAANQV 238
           N T Y+FWD  H SEAAN+V
Sbjct: 320 NATNYVFWDGFHPSEAANRV 339

[Close]

BLAST of CU145174 vs. Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.8e-08
Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 1


Query: 1   QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETC 60
           +K L G+K +  +++ PL+D I +P+ +GF+   KGCC TGA+E V+VLCN      C
Sbjct: 273 RKTLPGIKPIYINIYDPLFDIIQNPANYGFEVSNKGCCGTGAIE-VAVLCNKITSSVC 329

Query: 61   120
           
Sbjct: 333  329

Query: 121  175
           
Sbjct: 393  329

[Close]

BLAST of CU145174 vs. TrEMBL
Match: A0A0A0K9R1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452290 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 1


Query: 1   QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
           QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCS 
Sbjct: 275 QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSN 334

Query: 61  CNQ 120
             +
Sbjct: 335 ATK 337

Query: 121  180
           
Sbjct: 395  337

Query: 181  190
           
Sbjct: 455  337

[Close]

BLAST of CU145174 vs. TrEMBL
Match: A0A0A0K9R1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452290 PE=4 SV=1)

HSP 1 Score: 43.1 bits (100), Expect = 1.8e-01
Identity = 18/20 (90.00%), Postives = 19/20 (95.00%), Query Frame = 2


Query: 179 NVTKYMFWDSIHLSEAANQV 238
           N TKYMFWDSIHLSEAANQ+
Sbjct: 334 NATKYMFWDSIHLSEAANQM 353

HSP 2 Score: 95.1 bits (235), Expect = 4.0e-17
Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 1


Query: 1   QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
           QKQL GLK+VVFD+FKPLYD + SPS +GF E RKGCC TG VET S++CNPK   TCS 
Sbjct: 261 QKQLPGLKIVVFDIFKPLYDLVQSPSKYGFAEARKGCCGTGIVETTSLMCNPKSPGTCSN 320

Query: 61  CNQ 120
             Q
Sbjct: 321 ATQ 323

Query: 121  180
           
Sbjct: 381  323

Query: 181  190
           
Sbjct: 441  323

[Close]

BLAST of CU145174 vs. TrEMBL
Match: V7BZQ3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G164800g PE=4 SV=1)

HSP 1 Score: 37.0 bits (84), Expect = 1.3e+01
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 2


Query: 179 NVTKYMFWDSIHLSEAANQV 238
           N T+Y+FWDS+H S+AANQV
Sbjct: 320 NATQYVFWDSVHPSQAANQV 339

HSP 2 Score: 94.7 bits (234), Expect = 5.3e-17
Identity = 43/63 (68.25%), Postives = 47/63 (74.60%), Query Frame = 1


Query: 1   QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
           QKQL GLK+VVFD+FKPLYD + SPS  GF E RKGCC TG VET S+LCNPK   TCS 
Sbjct: 273 QKQLPGLKIVVFDIFKPLYDLVQSPSKFGFAEARKGCCGTGIVETTSLLCNPKSPGTCSN 332

Query: 61  CNQ 120
             Q
Sbjct: 333 ATQ 335

Query: 121  180
           
Sbjct: 393  335

Query: 181  190
           
Sbjct: 453  335

[Close]

BLAST of CU145174 vs. TrEMBL
Match: A0A0S3SFN8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G027100 PE=4 SV=1)

HSP 1 Score: 37.0 bits (84), Expect = 1.3e+01
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 2


Query: 179 NVTKYMFWDSIHLSEAANQV 238
           N T+Y+FWDS+H S+AANQV
Sbjct: 332 NATQYVFWDSVHPSQAANQV 351

HSP 2 Score: 94.4 bits (233), Expect = 6.9e-17
Identity = 43/63 (68.25%), Postives = 47/63 (74.60%), Query Frame = 1


Query: 1   QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
           QKQL GLK+VVFD+FKPLYD + SPS  GF E RKGCC TG VET S+LCNPK   TCS 
Sbjct: 261 QKQLPGLKIVVFDIFKPLYDLVQSPSKFGFAEARKGCCGTGIVETTSLLCNPKSLGTCSN 320

Query: 61  CNQ 120
             Q
Sbjct: 321 ATQ 323

Query: 121  180
           
Sbjct: 381  323

Query: 181  190
           
Sbjct: 441  323

[Close]

BLAST of CU145174 vs. TrEMBL
Match: I1M5F3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G353100 PE=4 SV=2)

HSP 1 Score: 37.7 bits (86), Expect = 7.6e+00
Identity = 18/45 (40.00%), Postives = 24/45 (53.33%), Query Frame = 2


Query: 104 KGVVALGLWRRYQSCAIQSSMKHVLNVTKYMFWDSIHLSEAANQV 163
           KG    G+           S+    N T+Y+FWDS+H S+AANQV
Sbjct: 295 KGCCGTGIVETTSLLCNPKSLGTCSNATQYVFWDSVHPSQAANQV 339

Query: 164  223
           
Sbjct: 355  339

Query: 224  239
           
Sbjct: 415  339

HSP 2 Score: 94.4 bits (233), Expect = 6.9e-17
Identity = 43/63 (68.25%), Postives = 47/63 (74.60%), Query Frame = 1


Query: 1   QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
           QKQL GLK+VVFD+FKPLYD + SPS  GF E RKGCC TG VET S+LCNPK   TCS 
Sbjct: 261 QKQLPGLKIVVFDIFKPLYDLVQSPSKFGFAEARKGCCGTGIVETTSLLCNPKSLGTCSN 320

Query: 61  CNQ 120
             Q
Sbjct: 321 ATQ 323

Query: 121  180
           
Sbjct: 381  323

Query: 181  190
           
Sbjct: 441  323

[Close]

BLAST of CU145174 vs. NCBI nr
Match: gi|449447826|ref|XP_004141668.1| (PREDICTED: GDSL esterase/lipase APG [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 6.2e-27
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 1


Query: 1   QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
           QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCS 
Sbjct: 275 QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSN 334

Query: 61  CNQ 120
             +
Sbjct: 335 ATK 337

Query: 121  180
           
Sbjct: 395  337

Query: 181  190
           
Sbjct: 455  337

[Close]

BLAST of CU145174 vs. NCBI nr
Match: gi|659124895|ref|XP_008462401.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X2 [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 3.2e-23
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 1    QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
            QKQL  LKLVVFD+FKPL+DAIMSPSTHGFDEVRKGCCSTGAVET SVLCNPK H+TCS 
Sbjct: 1093 QKQLPSLKLVVFDIFKPLHDAIMSPSTHGFDEVRKGCCSTGAVETASVLCNPKSHQTCSN 1152

Query: 61   CNQ 120
              +
Sbjct: 1153 ATK 1155

Query: 121   180
            
Sbjct: 1213  1155

Query: 181   190
            
Sbjct: 1273  1155

[Close]

BLAST of CU145174 vs. NCBI nr
Match: gi|659124897|ref|XP_008462402.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X3 [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 3.2e-23
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 1    QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
            QKQL  LKLVVFD+FKPL+DAIMSPSTHGFDEVRKGCCSTGAVET SVLCNPK H+TCS 
Sbjct: 1088 QKQLPSLKLVVFDIFKPLHDAIMSPSTHGFDEVRKGCCSTGAVETASVLCNPKSHQTCSN 1147

Query: 61   CNQ 120
              +
Sbjct: 1148 ATK 1150

Query: 121   180
            
Sbjct: 1208  1150

Query: 181   190
            
Sbjct: 1268  1150

[Close]

BLAST of CU145174 vs. NCBI nr
Match: gi|659124899|ref|XP_008462403.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X4 [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 3.2e-23
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 1    QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
            QKQL  LKLVVFD+FKPL+DAIMSPSTHGFDEVRKGCCSTGAVET SVLCNPK H+TCS 
Sbjct: 1076 QKQLPSLKLVVFDIFKPLHDAIMSPSTHGFDEVRKGCCSTGAVETASVLCNPKSHQTCSN 1135

Query: 61   CNQ 120
              +
Sbjct: 1136 ATK 1138

Query: 121   180
            
Sbjct: 1196  1138

Query: 181   190
            
Sbjct: 1256  1138

[Close]

BLAST of CU145174 vs. NCBI nr
Match: gi|659124901|ref|XP_008462404.1| (PREDICTED: GDSL esterase/lipase APG isoform X5 [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 3.2e-23
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 1   QKQLSGLKLVVFDVFKPLYDAIMSPSTHGFDEVRKGCCSTGAVETVSVLCNPKFHETCSK 60
           QKQL  LKLVVFD+FKPL+DAIMSPSTHGFDEVRKGCCSTGAVET SVLCNPK H+TCS 
Sbjct: 329 QKQLPSLKLVVFDIFKPLHDAIMSPSTHGFDEVRKGCCSTGAVETASVLCNPKSHQTCSN 388

Query: 61  CNQ 120
             +
Sbjct: 389 ATK 391

Query: 121  180
           
Sbjct: 449  391

Query: 181  190
           
Sbjct: 509  391

The following BLAST results are available for this feature:

BLAST of CU145174 vs. Swiss-Prot


Match Name	E-value	Identity	Description
APG2_ARATH	1.3e-16	60.32	GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=2 SV=1	[more]
GDL78_ARATH	7.3e-12	50.79	GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=3 SV=3	[more]
GDL73_ARATH	1.5e-09	54.39	GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1	[more]
GDL72_ARATH	7.6e-09	50.88	GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1	[more]
EXL3_ARATH	3.8e-08	43.10	GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1	[more]

BLAST of CU145174 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9R1_CUCSA	1.3e-26	93.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452290 PE=4 SV=1	[more]
A0A0A0K9R1_CUCSA	1.8e-01	90.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452290 PE=4 SV=1	[more]
V7BZQ3_PHAVU	1.3e+01	70.00	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G164800g PE=4 SV=1	[more]
A0A0S3SFN8_PHAAN	1.3e+01	70.00	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G027100 PE=...	[more]
I1M5F3_SOYBN	7.6e+00	40.00	Uncharacterized protein OS=Glycine max GN=GLYMA_13G353100 PE=4 SV=2	[more]

BLAST of CU145174 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447826\|ref\|XP_004141668.1\|	6.2e-27	93.65	PREDICTED: GDSL esterase/lipase APG [Cucumis sativus]	[more]
gi\|659124895\|ref\|XP_008462401.1\|	3.2e-23	82.54	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 ...	[more]
gi\|659124897\|ref\|XP_008462402.1\|	3.2e-23	82.54	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 ...	[more]
gi\|659124899\|ref\|XP_008462403.1\|	3.2e-23	82.54	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 ...	[more]
gi\|659124901\|ref\|XP_008462404.1\|	3.2e-23	82.54	PREDICTED: GDSL esterase/lipase APG isoform X5 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G452290	Csa7G452290	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
G0126137	G0126137	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22835	ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN	coord: 1..63 score: 2.5
None	No IPR available	PANTHER	PTHR22835:SF170	SUBFAMILY NOT NAMED	coord: 1..63 score: 2.5