CU145108 (transcribed_cluster) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
AAGCACTGATCCCTGACTTTTCTCTGAATCCATAACAGATTTAAGTTCTGCAACCTTCTGTCTAGCAGCATGTTCTACAGGAATAAGTGAGCCTTGTTCCTTAATACACTCTTGCTCTTCTTCTTGAGCTTTCAAGGTTTCCAATTTTCTCTTTTGAAGCTCAGTTTTAATCTGTTCAAGTCTTTGTAGACTTTTCTTCTATTGTTTTTCAGT
BLAST of CU145108 vs. Swiss-Prot
Match: SMC4_ARATH (Structural maintenance of chromosomes protein 4 OS=Arabidopsis thaliana GN=SMC4 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-10 Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = -1
BLAST of CU145108 vs. TrEMBL
Match: A0A0A0KUL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G532970 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.2e-23 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = -1
BLAST of CU145108 vs. TrEMBL
Match: V7C2X7_PHAVU (Structural maintenance of chromosomes protein OS=Phaseolus vulgaris GN=PHAVU_004G029000g PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.4e-13 Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = -1
BLAST of CU145108 vs. TrEMBL
Match: V4SUG6_9ROSI (Structural maintenance of chromosomes protein OS=Citrus clementina GN=CICLE_v10010934mg PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.1e-13 Identity = 40/60 (66.67%), Postives = 50/60 (83.33%), Query Frame = -1
BLAST of CU145108 vs. TrEMBL
Match: A0A061EEP1_THECC (Structural maintenance of chromosomes protein OS=Theobroma cacao GN=TCM_018557 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.1e-13 Identity = 41/60 (68.33%), Postives = 52/60 (86.67%), Query Frame = -1
BLAST of CU145108 vs. TrEMBL
Match: A0A061EMB4_THECC (Structural maintenance of chromosomes protein OS=Theobroma cacao GN=TCM_018557 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.1e-13 Identity = 41/60 (68.33%), Postives = 52/60 (86.67%), Query Frame = -1
BLAST of CU145108 vs. NCBI nr
Match: gi|778703815|ref|XP_011655432.1| (PREDICTED: structural maintenance of chromosomes protein 4 [Cucumis sativus]) HSP 1 Score: 107.8 bits (268), Expect = 7.7e-21 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = -1
BLAST of CU145108 vs. NCBI nr
Match: gi|700196239|gb|KGN51416.1| (hypothetical protein Csa_5G532970 [Cucumis sativus]) HSP 1 Score: 107.8 bits (268), Expect = 7.7e-21 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = -1
BLAST of CU145108 vs. NCBI nr
Match: gi|659121263|ref|XP_008460572.1| (PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 4 [Cucumis melo]) HSP 1 Score: 99.8 bits (247), Expect = 2.1e-18 Identity = 54/60 (90.00%), Postives = 59/60 (98.33%), Query Frame = -1
BLAST of CU145108 vs. NCBI nr
Match: gi|502153800|ref|XP_004509467.1| (PREDICTED: structural maintenance of chromosomes protein 4 [Cicer arietinum]) HSP 1 Score: 75.9 bits (185), Expect = 3.2e-11 Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = -1
BLAST of CU145108 vs. NCBI nr
Match: gi|1021582615|ref|XP_016180702.1| (PREDICTED: structural maintenance of chromosomes protein 4 [Arachis ipaensis]) HSP 1 Score: 73.6 bits (179), Expect = 1.6e-10 Identity = 40/60 (66.67%), Postives = 51/60 (85.00%), Query Frame = -1
The following BLAST results are available for this feature:
The following terms have been associated with this transcribed_cluster:
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
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