CU143352 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU143352
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 16692444 .. 16692645 (+)
Sequence length201
The following sequences are available for this feature:

transcribed_cluster sequence

TGATCAGGAAGAGAACATCAGTTCAAATAATGCAGTGCAACGAATTCAAACAACCAAGCGAACTACATTATTTTCTTTAAAACTACCGATCAGCTTTGTCAGCCTCATTCAAGGCTTTTATATATTTATTGTAGTAATGTCGATAAAAGCTCTGCATTTCACGCGCATCACTCTTTTGCCTTTCAGCTAATGTTGTTACAT
Library categoryESTs
gynoecious flower library1
BLAST of CU143352 vs. Swiss-Prot
Match: CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=3)

HSP 1 Score: 63.5 bits (153), Expect = 9.7e-10
Identity = 32/38 (84.21%), Postives = 32/38 (84.21%), Query Frame = -3

Query: 86  TTLAERQKSDAREMQSFYRHYYNKYIKAL-NEADKADR 145
           TTLA RQKSDAREMQSFY+HYY KYI+AL N ADKADR
Sbjct: 100 TTLAGRQKSDAREMQSFYQHYYKKYIQALQNAADKADR 137

Query: 146 197
           
Sbjct: 160 137

BLAST of CU143352 vs. Swiss-Prot
Match: CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 9.7e-10
Identity = 32/38 (84.21%), Postives = 32/38 (84.21%), Query Frame = -3

Query: 86  TTLAERQKSDAREMQSFYRHYYNKYIKA-LNEADKADR 145
           TTLA RQKSDAREMQSFY+HYY KYI+A LN ADKADR
Sbjct: 100 TTLAGRQKSDAREMQSFYQHYYKKYIQALLNAADKADR 137

Query: 146 197
           
Sbjct: 160 137

BLAST of CU143352 vs. Swiss-Prot
Match: CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3)

HSP 1 Score: 55.1 bits (131), Expect = 3.4e-07
Identity = 27/38 (71.05%), Postives = 29/38 (76.32%), Query Frame = -3

Query: 86  TTLAERQKSDAREMQSFYRHYYNKYIKAL-NEADKADR 145
           T +   +KSDAREMQSFY+HYY KYI+AL N ADKADR
Sbjct: 104 TLMGRVKKSDAREMQSFYQHYYKKYIQALHNAADKADR 141

Query: 146 197
           
Sbjct: 164 141

BLAST of CU143352 vs. TrEMBL
Match: A0A0A0K8F7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429550 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.2e-12
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = -3

Query: 89  VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKAD 148
           VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKAD
Sbjct: 98  VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKAD 134

Query: 149 200
           
Sbjct: 158 134

BLAST of CU143352 vs. TrEMBL
Match: A0A0A0K646_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429560 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 8.8e-10
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = -3

Query: 86  TTLAERQKSDAREMQSFYRHYYNKYIKALNEADKADR 145
           TTLAERQKSDA EM++FYRHYY KYIKALNEADKADR
Sbjct: 83  TTLAERQKSDACEMKNFYRHYYTKYIKALNEADKADR 119

Query: 146 197
           
Sbjct: 143 119

BLAST of CU143352 vs. TrEMBL
Match: A0A118K067_CYNCS (1,3-beta-glucan synthase subunit FKS1-like, domain-1 OS=Cynara cardunculus var. scolymus GN=Ccrd_021124 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-08
Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = -3

Query: 86  VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKADR 145
           +TTLA R KSDAREMQSFYRHYY KYI+AL  ADKADR
Sbjct: 131 ITTLAGRTKSDAREMQSFYRHYYGKYIQALQNADKADR 168

Query: 146 200
           
Sbjct: 191 168

BLAST of CU143352 vs. TrEMBL
Match: A0A0D3C7V6_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea GN=CALS1 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.8e-08
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = -3

Query: 86  TTLAERQKSDAREMQSFYRHYYNKYIKALNEADKADR 145
           TTLA RQKSDAREMQ FY+HYY KYI ALN ADKADR
Sbjct: 100 TTLAGRQKSDAREMQRFYQHYYEKYIHALNAADKADR 136

Query: 146 197
           
Sbjct: 160 136

BLAST of CU143352 vs. TrEMBL
Match: M4DG13_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.8e-08
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = -3

Query: 86  TTLAERQKSDAREMQSFYRHYYNKYIKALNEADKADR 145
           TTLA RQKSDAREMQ FY+HYY KYI ALN ADKADR
Sbjct: 100 TTLAGRQKSDAREMQRFYQHYYEKYIHALNAADKADR 136

Query: 146 197
           
Sbjct: 160 136

BLAST of CU143352 vs. NCBI nr
Match: gi|659122615|ref|XP_008461236.1| (PREDICTED: callose synthase 1 isoform X1 [Cucumis melo])

HSP 1 Score: 80.9 bits (198), Expect = 9.4e-13
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = -3

Query: 86  VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKADR 145
           VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKADR
Sbjct: 98  VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKADR 135

Query: 146 200
           
Sbjct: 158 135

BLAST of CU143352 vs. NCBI nr
Match: gi|778728756|ref|XP_011659471.1| (PREDICTED: LOW QUALITY PROTEIN: callose synthase 1 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 4.6e-12
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = -3

Query: 89  VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKAD 148
           VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKAD
Sbjct: 98  VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKAD 134

Query: 149 200
           
Sbjct: 158 134

BLAST of CU143352 vs. NCBI nr
Match: gi|700189936|gb|KGN45169.1| (hypothetical protein Csa_7G429550 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 4.6e-12
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = -3

Query: 89  VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKAD 148
           VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKAD
Sbjct: 98  VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKAD 134

Query: 149 200
           
Sbjct: 158 134

BLAST of CU143352 vs. NCBI nr
Match: gi|659122625|ref|XP_008461241.1| (PREDICTED: callose synthase 2 [Cucumis melo])

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-11
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = -3

Query: 86  VTTLAERQKSDAREMQSFYRHYYNKYIKALNEADKADR 145
           +TTLAERQKSDAREMQSFY+HYY KYIKALNEADKADR
Sbjct: 98  ITTLAERQKSDAREMQSFYQHYYTKYIKALNEADKADR 135

Query: 146 200
           
Sbjct: 158 135

BLAST of CU143352 vs. NCBI nr
Match: gi|778728744|ref|XP_011659469.1| (PREDICTED: callose synthase 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 70.9 bits (172), Expect = 9.7e-10
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = -3

Query: 86  TTLAERQKSDAREMQSFYRHYYNKYIKALNEADKADR 145
           TTLAERQKSDA EM++FYRHYY KYIKALNEADKADR
Sbjct: 83  TTLAERQKSDACEMKNFYRHYYTKYIKALNEADKADR 119

Query: 146 197
           
Sbjct: 143 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CALS2_ARATH9.7e-1084.21Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=3[more]
CALS1_ARATH9.7e-1084.21Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2[more]
CALS3_ARATH3.4e-0771.05Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3[more]
Match NameE-valueIdentityDescription
A0A0A0K8F7_CUCSA4.2e-12100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429550 PE=4 SV=1[more]
A0A0A0K646_CUCSA8.8e-1089.19Uncharacterized protein OS=Cucumis sativus GN=Csa_7G429560 PE=4 SV=1[more]
A0A118K067_CYNCS1.3e-0881.581,3-beta-glucan synthase subunit FKS1-like, domain-1 OS=Cynara cardunculus var. ... [more]
A0A0D3C7V6_BRAOL2.8e-0883.78Uncharacterized protein OS=Brassica oleracea var. oleracea GN=CALS1 PE=4 SV=1[more]
M4DG13_BRARP2.8e-0883.78Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659122615|ref|XP_008461236.1|9.4e-13100.00PREDICTED: callose synthase 1 isoform X1 [Cucumis melo][more]
gi|778728756|ref|XP_011659471.1|4.6e-12100.00PREDICTED: LOW QUALITY PROTEIN: callose synthase 1 [Cucumis sativus][more]
gi|700189936|gb|KGN45169.1|4.6e-12100.00hypothetical protein Csa_7G429550 [Cucumis sativus][more]
gi|659122625|ref|XP_008461241.1|1.8e-1192.11PREDICTED: callose synthase 2 [Cucumis melo][more]
gi|778728744|ref|XP_011659469.1|9.7e-1089.19PREDICTED: callose synthase 2 isoform X1 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G429560Csa7G429560gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0106506G0106506EST