CU142848 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU142848
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 7900095 .. 7900239 (-)
Sequence length146
The following sequences are available for this feature:

transcribed_cluster sequence

AATATTGGATGCTACAGCAACCTCCCCATACGCTTTAGGTTTTGCCTTTGGATCAGTAGGGCGCCCTCGATCCTTCTTAGCCAGCAAAGATGGACAATACTACAGACAAAGAAATTGTCACTTCTTGGGTACAATTATAAAAAAAG
Library categoryESTs
gynoecious flower library1
BLAST of CU142848 vs. TrEMBL
Match: A0A0A0LXI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077180 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.9e-10
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = -3

Query: 1   YCPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 60
           YCPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI
Sbjct: 466 YCPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 498

Query: 61  100
           
Sbjct: 526 498

BLAST of CU142848 vs. TrEMBL
Match: A0A067GQY5_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0036001mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.3e-07
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 1   CPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 60
           CPSLL KKDRGRPTDPKA+P+A+GEV+VASN+
Sbjct: 335 CPSLLVKKDRGRPTDPKARPRAFGEVSVASNV 366

Query: 61  97
           
Sbjct: 395 366

BLAST of CU142848 vs. TrEMBL
Match: A0A067H361_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0036001mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.3e-07
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 1   CPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 60
           CPSLL KKDRGRPTDPKA+P+A+GEV+VASN+
Sbjct: 484 CPSLLVKKDRGRPTDPKARPRAFGEVSVASNV 515

Query: 61  97
           
Sbjct: 544 515

BLAST of CU142848 vs. TrEMBL
Match: V4TNL1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030726mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.3e-07
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 1   CPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 60
           CPSLL KKDRGRPTDPKA+P+A+GEV+VASN+
Sbjct: 335 CPSLLVKKDRGRPTDPKARPRAFGEVSVASNV 366

Query: 61  97
           
Sbjct: 395 366

BLAST of CU142848 vs. TrEMBL
Match: V4TDP6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030726mg PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.3e-07
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 1   CPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 60
           CPSLL KKDRGRPTDPKA+P+A+GEV+VASN+
Sbjct: 484 CPSLLVKKDRGRPTDPKARPRAFGEVSVASNV 515

Query: 61  97
           
Sbjct: 544 515

BLAST of CU142848 vs. NCBI nr
Match: gi|449462125|ref|XP_004148792.1| (PREDICTED: protein SDA1 homolog [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-10
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = -3

Query: 1   YCPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 60
           YCPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI
Sbjct: 466 YCPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 498

Query: 61  100
           
Sbjct: 526 498

BLAST of CU142848 vs. NCBI nr
Match: gi|659120701|ref|XP_008460314.1| (PREDICTED: protein SDA1 homolog [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 4.1e-10
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = -3

Query: 1   YCPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 60
           YCPSLLAKKDRGRPTDPKA+PKAYGEVAVASNI
Sbjct: 466 YCPSLLAKKDRGRPTDPKARPKAYGEVAVASNI 498

Query: 61  100
           
Sbjct: 526 498

BLAST of CU142848 vs. NCBI nr
Match: gi|659130649|ref|XP_008465277.1| (PREDICTED: protein SDA1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-09
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = -3

Query: 1   YCPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 60
           YCPSLLAKKDRGRP DPKA+PKAYGEVAVASNI
Sbjct: 462 YCPSLLAKKDRGRPIDPKARPKAYGEVAVASNI 494

Query: 61  100
           
Sbjct: 522 494

BLAST of CU142848 vs. NCBI nr
Match: gi|659130653|ref|XP_008465279.1| (PREDICTED: protein SDA1 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-09
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = -3

Query: 1   YCPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 60
           YCPSLLAKKDRGRP DPKA+PKAYGEVAVASNI
Sbjct: 446 YCPSLLAKKDRGRPIDPKARPKAYGEVAVASNI 478

Query: 61  100
           
Sbjct: 506 478

BLAST of CU142848 vs. NCBI nr
Match: gi|659130655|ref|XP_008465280.1| (PREDICTED: protein SDA1 homolog isoform X3 [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-09
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = -3

Query: 1   YCPSLLAKKDRGRPTDPKAKPKAYGEVAVASNI 60
           YCPSLLAKKDRGRP DPKA+PKAYGEVAVASNI
Sbjct: 243 YCPSLLAKKDRGRPIDPKARPKAYGEVAVASNI 275

Query: 61  100
           
Sbjct: 303 275

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LXI0_CUCSA2.9e-10100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077180 PE=4 SV=1[more]
A0A067GQY5_CITSI2.3e-0781.25Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0036001mg PE=4 ... [more]
A0A067H361_CITSI2.3e-0781.25Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0036001mg PE=4 ... [more]
V4TNL1_9ROSI2.3e-0781.25Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030726mg PE=4 SV=1[more]
V4TDP6_9ROSI2.3e-0781.25Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030726mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449462125|ref|XP_004148792.1|1.9e-10100.00PREDICTED: protein SDA1 homolog [Cucumis sativus][more]
gi|659120701|ref|XP_008460314.1|4.1e-1096.97PREDICTED: protein SDA1 homolog [Cucumis melo][more]
gi|659130649|ref|XP_008465277.1|2.0e-0993.94PREDICTED: protein SDA1 homolog isoform X1 [Cucumis melo][more]
gi|659130653|ref|XP_008465279.1|2.0e-0993.94PREDICTED: protein SDA1 homolog isoform X2 [Cucumis melo][more]
gi|659130655|ref|XP_008465280.1|2.0e-0993.94PREDICTED: protein SDA1 homolog isoform X3 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G077180Csa1G077180gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0100740G0100740EST