CU142520 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU142520
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	N-alpha-acetyltransferase 40
Location	Chr1 : 3195919 .. 3199472 (+)
Sequence length	228

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GGGGTTCGGGGACTTTCTTGATGGAGTTAATTGAACTTATTGCTTGCAAGAACTGCATGGGTGCGGTGGTTTTCACTGTTCAAAAAGCTAACTCTAAAGCTTTGAATTTCTACCAAAGCAAGCTGCGTTATACCATTTCATCTATTTCACCCTCACGCGTCAATTTATCGATGGCAGTCGAAACGAGCTATGAAATTCTTGCAAGGCATTTTAATGAAGACGCTAAAG

Library


Library category	ESTs
gynoecious flower library	1

Homology

[Close]

BLAST of CU142520 vs. TrEMBL
Match: A0A0A0LT37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G030630 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-30
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 3


Query: 3   GSGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 62
           G GTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE
Sbjct: 185 GLGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 244

Query: 63  TSYEILARHFNEDAK 122
           TSYEIL + FNEDAK
Sbjct: 245 TSYEILCKAFNEDAK 259

Query: 123  182
           
Sbjct: 305  259

Query: 183  228
           
Sbjct: 365  259

[Close]

BLAST of CU142520 vs. TrEMBL
Match: F6I1V6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g00600 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.3e-20
Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 3


Query: 3   GSGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 62
           G G FLM+LIELIACKN MGAVV TVQKAN  A+NFY  KLRYTI+SISPSRVN  + V+
Sbjct: 188 GLGRFLMQLIELIACKNSMGAVVLTVQKANFSAMNFYVGKLRYTIASISPSRVNPLIGVD 247

Query: 63  TSYEILARHFNEDAK 122
           +SYEIL + F+++AK
Sbjct: 248 SSYEILCKAFSDEAK 262

Query: 123  182
           
Sbjct: 308  262

Query: 183  228
           
Sbjct: 368  262

[Close]

BLAST of CU142520 vs. TrEMBL
Match: B9I4U9_POPTR (GCN5-related N-acetyltransferase family protein OS=Populus trichocarpa GN=POPTR_0012s03830g PE=4 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 8.2e-20
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 3


Query: 3   GSGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 62
           G G FLM+LIELIA K+CMGAVV TVQKAN+ A+NFY+SKLRYTISSISPSRV+  M +E
Sbjct: 186 GLGKFLMQLIELIARKSCMGAVVLTVQKANAVAMNFYRSKLRYTISSISPSRVDPLMGLE 245

Query: 63  TSYEILARHFNEDAK 122
            SYEIL + F+ +AK
Sbjct: 246 KSYEILCKAFDHEAK 260

Query: 123  182
           
Sbjct: 306  260

Query: 183  228
           
Sbjct: 366  260

[Close]

BLAST of CU142520 vs. TrEMBL
Match: M5WN18_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010100mg PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.6e-18
Identity = 51/75 (68.00%), Postives = 59/75 (78.67%), Query Frame = 3


Query: 3   GSGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 62
           G G FLM+LIELIACKN MGAVV TVQKANS ALNFY  K+RY  S+ISPSRV+  + VE
Sbjct: 177 GLGKFLMQLIELIACKNHMGAVVLTVQKANSAALNFYLCKMRYVTSTISPSRVDPLIGVE 236

Query: 63  TSYEILARHFNEDAK 122
            SYEIL + F+ +AK
Sbjct: 237 KSYEILCKTFSNEAK 251

Query: 123  182
           
Sbjct: 297  251

Query: 183  228
           
Sbjct: 357  251

[Close]

BLAST of CU142520 vs. TrEMBL
Match: A0A103YEX2_CYNCS (Acyl-CoA N-acyltransferase OS=Cynara cardunculus var. scolymus GN=Ccrd_013796 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-17
Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 3


Query: 3   GSGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAV- 62
           G G FLM+L+ELIACKNCMGAVV TVQK NS A+NFY +KLRY +S+ISPS+V   + V 
Sbjct: 157 GIGKFLMQLVELIACKNCMGAVVLTVQKRNSSAINFYLNKLRYNVSTISPSKVYQLIGVI 216

Query: 63  --ETSYEILARHFNEDAK 122
             E SYEIL + F+ +AK
Sbjct: 217 GEEKSYEILCKTFDHEAK 234

Query: 123  182
           
Sbjct: 277  234

Query: 183  228
           
Sbjct: 337  234

[Close]

BLAST of CU142520 vs. NCBI nr
Match: gi|449439209|ref|XP_004137379.1| (PREDICTED: N-alpha-acetyltransferase 40 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 5.6e-30
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 3


Query: 3   GSGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 62
           G GTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE
Sbjct: 185 GLGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 244

Query: 63  TSYEILARHFNEDAK 122
           TSYEIL + FNEDAK
Sbjct: 245 TSYEILCKAFNEDAK 259

Query: 123  182
           
Sbjct: 305  259

Query: 183  228
           
Sbjct: 365  259

[Close]

BLAST of CU142520 vs. NCBI nr
Match: gi|659066239|ref|XP_008447777.1| (PREDICTED: N-alpha-acetyltransferase 40 [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 5.6e-30
Identity = 71/75 (94.67%), Postives = 72/75 (96.00%), Query Frame = 3


Query: 3   GSGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 62
           G GTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE
Sbjct: 185 GLGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 244

Query: 63  TSYEILARHFNEDAK 122
           TSYEIL + FNEDAK
Sbjct: 245 TSYEILCKAFNEDAK 259

Query: 123  182
           
Sbjct: 305  259

Query: 183  228
           
Sbjct: 365  259

[Close]

BLAST of CU142520 vs. NCBI nr
Match: gi|359495108|ref|XP_002263749.2| (PREDICTED: N-alpha-acetyltransferase 40 isoform X2 [Vitis vinifera])

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-19
Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 3


Query: 3   GSGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 62
           G G FLM+LIELIACKN MGAVV TVQKAN  A+NFY  KLRYTI+SISPSRVN  + V+
Sbjct: 188 GLGRFLMQLIELIACKNSMGAVVLTVQKANFSAMNFYVGKLRYTIASISPSRVNPLIGVD 247

Query: 63  TSYEILARHFNEDAK 122
           +SYEIL + F+++AK
Sbjct: 248 SSYEILCKAFSDEAK 262

Query: 123  182
           
Sbjct: 308  262

Query: 183  228
           
Sbjct: 368  262

[Close]

BLAST of CU142520 vs. NCBI nr
Match: gi|731436124|ref|XP_010645767.1| (PREDICTED: N-alpha-acetyltransferase 40 isoform X1 [Vitis vinifera])

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-19
Identity = 52/75 (69.33%), Postives = 62/75 (82.67%), Query Frame = 3


Query: 3   GSGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 62
           G G FLM+LIELIACKN MGAVV TVQKAN  A+NFY  KLRYTI+SISPSRVN  + V+
Sbjct: 234 GLGRFLMQLIELIACKNSMGAVVLTVQKANFSAMNFYVGKLRYTIASISPSRVNPLIGVD 293

Query: 63  TSYEILARHFNEDAK 122
           +SYEIL + F+++AK
Sbjct: 294 SSYEILCKAFSDEAK 308

Query: 123  182
           
Sbjct: 354  308

Query: 183  228
           
Sbjct: 414  308

[Close]

BLAST of CU142520 vs. NCBI nr
Match: gi|743913618|ref|XP_011000722.1| (PREDICTED: N-alpha-acetyltransferase 40 isoform X2 [Populus euphratica])

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-19
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 3


Query: 3   GSGTFLMELIELIACKNCMGAVVFTVQKANSKALNFYQSKLRYTISSISPSRVNLSMAVE 62
           G G FLM+LIELIA K+CMGAVV TVQKAN+ A+NFY+SKLRYTISSISPSRV+  M +E
Sbjct: 169 GLGKFLMQLIELIARKSCMGAVVLTVQKANALAMNFYRSKLRYTISSISPSRVDPLMGLE 228

Query: 63  TSYEILARHFNEDAK 122
            SYEIL + F+ +AK
Sbjct: 229 KSYEILCKAFDHEAK 243

Query: 123  182
           
Sbjct: 289  243

Query: 183  228
           
Sbjct: 349  243

The following BLAST results are available for this feature:

BLAST of CU142520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT37_CUCSA	1.3e-30	94.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G030630 PE=4 SV=1	[more]
F6I1V6_VITVI	6.3e-20	69.33	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g00600 PE=4 SV=...	[more]
B9I4U9_POPTR	8.2e-20	70.67	GCN5-related N-acetyltransferase family protein OS=Populus trichocarpa GN=POPTR_...	[more]
M5WN18_PRUPE	2.6e-18	68.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010100mg PE=4 SV=1	[more]
A0A103YEX2_CYNCS	1.3e-17	62.82	Acyl-CoA N-acyltransferase OS=Cynara cardunculus var. scolymus GN=Ccrd_013796 PE...	[more]

BLAST of CU142520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439209\|ref\|XP_004137379.1\|	5.6e-30	94.67	PREDICTED: N-alpha-acetyltransferase 40 [Cucumis sativus]	[more]
gi\|659066239\|ref\|XP_008447777.1\|	5.6e-30	94.67	PREDICTED: N-alpha-acetyltransferase 40 [Cucumis melo]	[more]
gi\|359495108\|ref\|XP_002263749.2\|	2.6e-19	69.33	PREDICTED: N-alpha-acetyltransferase 40 isoform X2 [Vitis vinifera]	[more]
gi\|731436124\|ref\|XP_010645767.1\|	2.6e-19	69.33	PREDICTED: N-alpha-acetyltransferase 40 isoform X1 [Vitis vinifera]	[more]
gi\|743913618\|ref\|XP_011000722.1\|	3.4e-19	70.67	PREDICTED: N-alpha-acetyltransferase 40 isoform X2 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G030630	Csa1G030630	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
G0097019	G0097019	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR20531	FAMILY NOT NAMED	coord: 4..76 score: 1.5
None	No IPR available	PANTHER	PTHR20531:SF1	N-ALPHA-ACETYLTRANSFERASE 40	coord: 4..76 score: 1.5