CU140884 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU140884
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionBlue copper-like protein
LocationChr1 : 14007910 .. 14008806 (+)
Sequence length258
The following sequences are available for this feature:

transcribed_cluster sequence

TGGTTGATTCCGGTCGGGGGTGACAGTGGCTGGATACGTCCTCCTAATTCTGACTTCTATTCCTCTTGGGCCGCGGGTCTAAAGTTTACCGTCGGAGATATTTTAGTGTTCAAACTTTATGGCGGGAGCTCACGACGTGGCCGGAGTGACAAAAGAAGGTTACGACAACTGCATCACAACCGATCCTATATTCTTAAACACTACATCCCCTTTTTCTTTCACTCTCGATAAACTTGACGATTTACTTTTTCATCTGCA
Library categoryESTs
gynoecious flower library1
BLAST of CU140884 vs. TrEMBL
Match: A0A0A0LU53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G348430 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.5e-17
Identity = 44/46 (95.65%), Postives = 44/46 (95.65%), Query Frame = 2

Query: 113 NFMAGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDDLLF 172
           NFMAGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDD  F
Sbjct: 61  NFMAGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDDYFF 106

Query: 173 232
           
Sbjct: 121 106

Query: 233 251
           
Sbjct: 181 106

BLAST of CU140884 vs. TrEMBL
Match: A0A0A0LU53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G348430 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.5e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query: 4   LIPVGGDSGWIRPPNSDFYSSWAAGLKFTVGDILVF 63
           +IPVGGDSGWIRPPNSDFYSSWAAGLKFTVGDILVF
Sbjct: 25  VIPVGGDSGWIRPPNSDFYSSWAAGLKFTVGDILVF 60

Query: 64  112
           
Sbjct: 85  60

BLAST of CU140884 vs. NCBI nr
Match: gi|449464640|ref|XP_004150037.1| (PREDICTED: cucumber peeling cupredoxin-like [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-17
Identity = 44/46 (95.65%), Postives = 44/46 (95.65%), Query Frame = 2

Query: 113 NFMAGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDDLLF 172
           NFMAGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDD  F
Sbjct: 61  NFMAGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDDYFF 106

Query: 173 232
           
Sbjct: 121 106

Query: 233 251
           
Sbjct: 181 106

BLAST of CU140884 vs. NCBI nr
Match: gi|659086521|ref|XP_008443977.1| (PREDICTED: umecyanin-like [Cucumis melo])

HSP 1 Score: 81.6 bits (200), Expect = 7.1e-13
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 2

Query: 113 NFMAGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDDLLF 172
           NF  G HDVAGVTK+GYDNC T +PIFLNTTSPFSFTLDKL+D  F
Sbjct: 61  NFATGGHDVAGVTKDGYDNCNTNNPIFLNTTSPFSFTLDKLEDFFF 106

Query: 173 232
           
Sbjct: 121 106

Query: 233 251
           
Sbjct: 181 106

BLAST of CU140884 vs. NCBI nr
Match: gi|778730563|ref|XP_011659820.1| (PREDICTED: umecyanin [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-08
Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 2

Query: 113 NFMAGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDDLLF 172
           NF+ G H+VAGVTK+GYDNC T +P F+NTTSPF FT+  LDDL F
Sbjct: 60  NFLTG-HNVAGVTKDGYDNCDTNNPKFINTTSPFLFTIKTLDDLFF 104

Query: 173 232
           
Sbjct: 120 104

Query: 233 251
           
Sbjct: 180 104

BLAST of CU140884 vs. NCBI nr
Match: gi|659086649|ref|XP_008444048.1| (PREDICTED: umecyanin-like [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 7.6e-07
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 2

Query: 131 HDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDDLLF 190
           H+VAGVTKEGYDNC T +  F+NTTSPF FT+  LDDL F
Sbjct: 74  HNVAGVTKEGYDNCDTNNLKFINTTSPFLFTIKTLDDLFF 113

Query: 191 250
           
Sbjct: 134 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LU53_CUCSA2.5e-1795.65Uncharacterized protein OS=Cucumis sativus GN=Csa_1G348430 PE=4 SV=1[more]
A0A0A0LU53_CUCSA2.5e-1297.22Uncharacterized protein OS=Cucumis sativus GN=Csa_1G348430 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449464640|ref|XP_004150037.1|3.6e-1795.65PREDICTED: cucumber peeling cupredoxin-like [Cucumis sativus][more]
gi|659086521|ref|XP_008443977.1|7.1e-1378.26PREDICTED: umecyanin-like [Cucumis melo][more]
gi|778730563|ref|XP_011659820.1|1.1e-0867.39PREDICTED: umecyanin [Cucumis sativus][more]
gi|659086649|ref|XP_008444048.1|7.6e-0770.00PREDICTED: umecyanin-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G348430Csa1G348430gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0078359G0078359EST