CU140648 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU140648
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 21025446 .. 21025656 (+)
Sequence length212
The following sequences are available for this feature:

transcribed_cluster sequence

CTTCATTTATCGTTTCTGTTGGACCTTTCCTCCTTTCAGTAGAGTACGTATTCTGAAAGATTTTATTTTGTTGAGATATTGGTGATTGTGGTGGTGTCTCTAGTGGCCGGATTTTACCATCATCAAATAGCTCGTCGGCTGATAGTGTGGTTGCCTCTAACTGCTGGCATATATCAAATGCAAAATCTTCATCCTCCATTTCTGGTTCATCC
Library categoryESTs
gynoecious flower library1
BLAST of CU140648 vs. TrEMBL
Match: A0A0A0L082_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639070 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.3e-32
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = -2

Query: 2   DEPEMEDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQNKIFQNTYSTER 61
           DEPEMEDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQNKIFQNTYSTER
Sbjct: 60  DEPEMEDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQNKIFQNTYSTER 119

Query: 62  RKGPTETINE 121
           RKGPTETINE
Sbjct: 120 RKGPTETINE 129

Query: 122 181
           
Sbjct: 180 129

Query: 182 212
           
Sbjct: 240 129

BLAST of CU140648 vs. TrEMBL
Match: A5BH42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017086 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 9.7e-07
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = -2

Query: 65  EDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQN 124
           +D+DFAFD   QLE T+LSADELFD GKIRPL  PP+  +S  N
Sbjct: 100 DDQDFAFDFSGQLERTSLSADELFDGGKIRPLRPPPRLQLSYNN 143

Query: 125 184
           
Sbjct: 160 143

Query: 185 197
           
Sbjct: 220 143

BLAST of CU140648 vs. TrEMBL
Match: F6HQE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00880 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 9.7e-07
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = -2

Query: 65  EDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQN 124
           +D+DFAFD   QLE T+LSADELFD GKIRPL  PP+  +S  N
Sbjct: 100 DDQDFAFDFSGQLERTSLSADELFDGGKIRPLRPPPRLQLSYNN 143

Query: 125 184
           
Sbjct: 160 143

Query: 185 197
           
Sbjct: 220 143

BLAST of CU140648 vs. TrEMBL
Match: B9GNY3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s13000g PE=4 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 9.7e-07
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = -2

Query: 26  DEDFAFDICQQLEATTLSADELFDDGKIRPLETP----------------PQSPISQQNK 85
           ++DFAFD C +LE T+LSADELFD GKIRPL+ P                P+SPI +  +
Sbjct: 92  EDDFAFDFCVELEKTSLSADELFDGGKIRPLKPPPRLQGEGFTQISPLSSPRSPIQKGKR 151

Query: 86  IFQNTYSTERRK 145
           + +  +S  ++K
Sbjct: 152 MIREAFSPRKKK 163

Query: 146 194
           
Sbjct: 212 163

BLAST of CU140648 vs. TrEMBL
Match: A0A0D2TT45_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G209200 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 9.7e-07
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = -2

Query: 26  EDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQ--------------------SPI 85
           +D+DFAFD  + LE T+LSA+ELFD GKI+PL+ PP+                    SP+
Sbjct: 97  DDDDFAFDFSEALEKTSLSAEELFDGGKIKPLKPPPRLQVDEYNQKSPLLSSPRSPTSPL 156

Query: 86  SQQNKIFQNTYSTERRK 145
           SQ  K F+  +S  ++K
Sbjct: 157 SQGRKFFREAFSPRKKK 173

Query: 146 197
           
Sbjct: 217 173

BLAST of CU140648 vs. NCBI nr
Match: gi|449447231|ref|XP_004141372.1| (PREDICTED: uncharacterized protein LOC101222235 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 4.7e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = -2

Query: 2   DEPEMEDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQNKIFQNTYSTER 61
           DEPEMEDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQNKIFQNTYSTER
Sbjct: 60  DEPEMEDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQNKIFQNTYSTER 119

Query: 62  RKGPTETINE 121
           RKGPTETINE
Sbjct: 120 RKGPTETINE 129

Query: 122 181
           
Sbjct: 180 129

Query: 182 212
           
Sbjct: 240 129

BLAST of CU140648 vs. NCBI nr
Match: gi|659105309|ref|XP_008453065.1| (PREDICTED: pinin [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-30
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = -2

Query: 2   DEPEMEDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQNKIFQNTYSTER 61
           DEPE+EDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQNKIFQNTYSTER
Sbjct: 60  DEPELEDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQNKIFQNTYSTER 119

Query: 62  RKGPTETINE 121
           RKGPTETINE
Sbjct: 120 RKGPTETINE 129

Query: 122 181
           
Sbjct: 180 129

Query: 182 212
           
Sbjct: 240 129

BLAST of CU140648 vs. NCBI nr
Match: gi|1009136239|ref|XP_015885427.1| (PREDICTED: uncharacterized protein LOC107420880 [Ziziphus jujuba])

HSP 1 Score: 58.2 bits (139), Expect = 6.9e-06
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = -2

Query: 29  DEDFAFDICQQLEATTLSADELFDDGKIRPLETP---------PQSPISQQNKIFQNTYS 88
           ++DFAFD  ++LE  +LSADELFD GKIRP+E P         P+ PI+Q  KI +   S
Sbjct: 80  EDDFAFDFSEELERASLSADELFDGGKIRPMEPPPPRRQIPNFPKLPITQGKKIIRKALS 139

Query: 89  TERR 148
            +RR
Sbjct: 140 PKRR 143

Query: 149 194
           
Sbjct: 200 143

BLAST of CU140648 vs. NCBI nr
Match: gi|225428735|ref|XP_002281981.1| (PREDICTED: uncharacterized protein LOC100253812 [Vitis vinifera])

HSP 1 Score: 58.2 bits (139), Expect = 6.9e-06
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = -2

Query: 65  EDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQN 124
           +D+DFAFD   QLE T+LSADELFD GKIRPL  PP+  +S  N
Sbjct: 100 DDQDFAFDFSGQLERTSLSADELFDGGKIRPLRPPPRLQLSYNN 143

Query: 125 184
           
Sbjct: 160 143

Query: 185 197
           
Sbjct: 220 143

BLAST of CU140648 vs. NCBI nr
Match: gi|147811058|emb|CAN63485.1| (hypothetical protein VITISV_017086 [Vitis vinifera])

HSP 1 Score: 58.2 bits (139), Expect = 6.9e-06
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = -2

Query: 65  EDEDFAFDICQQLEATTLSADELFDDGKIRPLETPPQSPISQQN 124
           +D+DFAFD   QLE T+LSADELFD GKIRPL  PP+  +S  N
Sbjct: 100 DDQDFAFDFSGQLERTSLSADELFDGGKIRPLRPPPRLQLSYNN 143

Query: 125 184
           
Sbjct: 160 143

Query: 185 197
           
Sbjct: 220 143

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L082_CUCSA1.3e-32100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639070 PE=4 SV=1[more]
A5BH42_VITVI9.7e-0763.64Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017086 PE=4 SV=1[more]
F6HQE2_VITVI9.7e-0763.64Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00880 PE=4 SV=... [more]
B9GNY3_POPTR9.7e-0741.67Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s13000g PE=4 SV=2[more]
A0A0D2TT45_GOSRA9.7e-0740.26Uncharacterized protein OS=Gossypium raimondii GN=B456_009G209200 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449447231|ref|XP_004141372.1|4.7e-31100.00PREDICTED: uncharacterized protein LOC101222235 [Cucumis sativus][more]
gi|659105309|ref|XP_008453065.1|1.1e-3098.57PREDICTED: pinin [Cucumis melo][more]
gi|1009136239|ref|XP_015885427.1|6.9e-0648.44PREDICTED: uncharacterized protein LOC107420880 [Ziziphus jujuba][more]
gi|225428735|ref|XP_002281981.1|6.9e-0663.64PREDICTED: uncharacterized protein LOC100253812 [Vitis vinifera][more]
gi|147811058|emb|CAN63485.1|6.9e-0663.64hypothetical protein VITISV_017086 [Vitis vinifera][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR012442DUF1645_plant

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G639070Csa4G639070gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0075844G0075844EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012442Protein of unknown function DUF1645, plantPFAMPF07816DUF1645coord: 26..56
score: 1.
NoneNo IPR availablePANTHERPTHR33095FAMILY NOT NAMEDcoord: 2..63
score: 6.7
NoneNo IPR availablePANTHERPTHR33095:SF7AR781coord: 2..63
score: 6.7