CU140149 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU140149
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTIR-NBS disease resistance-like protein
LocationChr2 : 5929870 .. 5931943 (+)
Sequence length230
The following sequences are available for this feature:

transcribed_cluster sequence

GGAGGTTTGCGGCCGCGTTTGAGAAGCACGAGAAGAGATATAGGTAGTAAAATTACGGTGGAGGTCCTGCGGTGGAGGGCGGCGCTCACGGAGGCCGCTAGCTTGTCCGGCTGGGACTTGAGGCAGCTAGCCGATGGGCATGAAGGAAAATTCATACAGAAAATAGTGGAAAGGGTTCAAAGCGAACTGCGAGTGACATATTTGGAAGTCGCCATCTACCCTGTTGGCAT
Library categoryESTs
gynoecious flower library1
BLAST of CU140149 vs. TrEMBL
Match: A0A0A0LJJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074250 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.8e-23
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1

Query: 55  TVEVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 114
           +VEVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG
Sbjct: 138 SVEVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 195

Query: 115 174
           
Sbjct: 198 195

Query: 175 229
           
Sbjct: 258 195

BLAST of CU140149 vs. TrEMBL
Match: A0A0A0LJJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074250 PE=4 SV=1)

HSP 1 Score: 31.2 bits (69), Expect = 6.8e+02
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 3

Query: 3   RFAAAFEKHEKRY 42
           RFAAAFEKHEKRY
Sbjct: 122 RFAAAFEKHEKRY 134


HSP 2 Score: 82.4 bits (202), Expect = 2.6e-13
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 1

Query: 61  EVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 120
           +VLRWR+ALTEAA+LSGWDLR  ADGHE KFI+KI E +  +L+ TYL  A+YPVG
Sbjct: 165 KVLRWRSALTEAANLSGWDLRNTADGHEAKFIKKITEEILRQLKNTYLFEALYPVG 220

Query: 121 180
           
Sbjct: 225 220

Query: 181 229
           
Sbjct: 285 220

BLAST of CU140149 vs. TrEMBL
Match: U7E0N2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0182s00200g PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.7e-13
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 1

Query: 61  EVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 120
           +V  WR ALTEAA+LSGWDLR +ADGHE KFI+KIV  +  ELR TYL VA YPVG
Sbjct: 148 KVATWRMALTEAANLSGWDLRNVADGHEAKFIKKIVGEILRELRSTYLFVAFYPVG 203

Query: 121 180
           
Sbjct: 208 203

Query: 181 229
           
Sbjct: 268 203

BLAST of CU140149 vs. TrEMBL
Match: M5XI94_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022336mg PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 9.8e-13
Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 1

Query: 61  EVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 120
           +VLRWR+ALTEAA+LSGWDLR  ADGHE +FI+KI+  +  +L   YL VA+YPVG
Sbjct: 142 KVLRWRSALTEAANLSGWDLRNTADGHEARFIRKIIAEITRQLNNAYLFVAVYPVG 197

Query: 121 180
           
Sbjct: 202 197

Query: 181 229
           
Sbjct: 262 197

BLAST of CU140149 vs. TrEMBL
Match: U5FF18_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s01570g PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 9.8e-13
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 1

Query: 61  EVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 120
           +V  WR ALTEAA+LSGWDLR +ADGHE KFI+KIV  +  EL  TYL VA YPVG
Sbjct: 144 KVATWRMALTEAANLSGWDLRNVADGHEAKFIKKIVREISRELSSTYLFVAFYPVG 199

Query: 121 180
           
Sbjct: 204 199

Query: 181 229
           
Sbjct: 264 199

BLAST of CU140149 vs. NCBI nr
Match: gi|778674089|ref|XP_004152878.2| (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-23
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1

Query: 55  TVEVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 114
           +VEVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG
Sbjct: 138 SVEVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 195

Query: 115 174
           
Sbjct: 198 195

Query: 175 229
           
Sbjct: 258 195

BLAST of CU140149 vs. NCBI nr
Match: gi|700206145|gb|KGN61264.1| (hypothetical protein Csa_2G074250 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-23
Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1

Query: 55  TVEVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 114
           +VEVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG
Sbjct: 138 SVEVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 195

Query: 115 174
           
Sbjct: 198 195

Query: 175 229
           
Sbjct: 258 195

BLAST of CU140149 vs. NCBI nr
Match: gi|659082460|ref|XP_008441852.1| (PREDICTED: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 9.7e-22
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 1

Query: 55  TVEVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 114
           +VEVLRWRAAL EAASLSGWDLRQLADGHEGKFI KIVERVQSELRVTYLEVAIYPVG
Sbjct: 138 SVEVLRWRAALREAASLSGWDLRQLADGHEGKFITKIVERVQSELRVTYLEVAIYPVG 195

Query: 115 174
           
Sbjct: 198 195

Query: 175 229
           
Sbjct: 258 195

BLAST of CU140149 vs. NCBI nr
Match: gi|703067510|ref|XP_010087987.1| (TMV resistance protein N [Morus notabilis])

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-13
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 1

Query: 61  EVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 120
           +VLRWR+ALTEAA+LSGWDLR  ADGHE KFI+KI E +  +L+ TYL  A+YPVG
Sbjct: 165 KVLRWRSALTEAANLSGWDLRNTADGHEAKFIKKITEEILRQLKNTYLFEALYPVG 220

Query: 121 180
           
Sbjct: 225 220

Query: 181 229
           
Sbjct: 285 220

BLAST of CU140149 vs. NCBI nr
Match: gi|659085381|ref|XP_008443388.1| (PREDICTED: TMV resistance protein N [Cucumis melo])

HSP 1 Score: 82.0 bits (201), Expect = 4.8e-13
Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 1

Query: 61  EVLRWRAALTEAASLSGWDLRQLADGHEGKFIQKIVERVQSELRVTYLEVAIYPVG 120
           +VL+WR ALTEAA+LSGWDLR +ADGHE KFI+ IVE+V  E+   YL +A+YPVG
Sbjct: 139 KVLKWRMALTEAANLSGWDLRNIADGHEAKFIRLIVEKVSKEVNSKYLFIALYPVG 194

Query: 121 180
           
Sbjct: 199 194

Query: 181 229
           
Sbjct: 259 194

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LJJ7_CUCSA2.8e-2398.28Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074250 PE=4 SV=1[more]
A0A0A0LJJ7_CUCSA6.8e+02100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074250 PE=4 SV=1[more]
U7E0N2_POPTR5.7e-1369.64Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0182s00200g PE=4 SV=1[more]
M5XI94_PRUPE9.8e-1364.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022336mg PE=4 SV=1[more]
U5FF18_POPTR9.8e-1367.86Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s01570g P... [more]
Match NameE-valueIdentityDescription
gi|778674089|ref|XP_004152878.2|3.9e-2398.28PREDICTED: TMV resistance protein N-like [Cucumis sativus][more]
gi|700206145|gb|KGN61264.1|3.9e-2398.28hypothetical protein Csa_2G074250 [Cucumis sativus][more]
gi|659082460|ref|XP_008441852.1|9.7e-2294.83PREDICTED: TMV resistance protein N-like [Cucumis melo][more]
gi|703067510|ref|XP_010087987.1|3.7e-1367.86TMV resistance protein N [Morus notabilis][more]
gi|659085381|ref|XP_008443388.1|4.8e-1366.07PREDICTED: TMV resistance protein N [Cucumis melo][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G074250Csa2G074250gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0070117G0070117EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11017LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 21..76
score: 3.0
NoneNo IPR availablePANTHERPTHR11017:SF155SUBFAMILY NOT NAMEDcoord: 21..76
score: 3.0