CU139755 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU139755
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 13459732 .. 13459978 (-)
Sequence length251
The following sequences are available for this feature:

transcribed_cluster sequence

TCATTGAGGAAAGATCGGAATCTTTGTTGCAAAATTCATACCACATTTCTGATTCCTTGGAAACTACTGGTATTCAAATACAACAAGTGGCTCAAACATCAAGGAAACTAGAAGATCACATGGGCGCTGTGCTACACCACTCAGAAAAAAGTTTATGAACAAATCCAGGAGGATGGAGACTTCCCAATTGGAACTTCAAGAAGGCCAGTTAAAAGCTGAGAAAGAAGTTTGGGAGGAAGGAATGGAGATGC
Library categoryESTs
gynoecious flower library1
BLAST of CU139755 vs. TrEMBL
Match: A0A0A0L6W7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G194400 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.8e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 3

Query: 3   IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSEK 62
           IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSEK
Sbjct: 148 IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSEK 196

Query: 63  122
           
Sbjct: 208 196

Query: 123 150
           
Sbjct: 268 196

BLAST of CU139755 vs. TrEMBL
Match: A0A0A0L6W7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G194400 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-02
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 2

Query: 146 KKFMNKSRRMETSQLELQEGQLKAEKEVWEEGMEM 205
           +K   +SRRMETSQLELQEGQLK  + + EEGMEM
Sbjct: 195 EKVYEQSRRMETSQLELQEGQLKLRRSL-EEGMEM 228

Query: 206 251
           
Sbjct: 255 228


HSP 2 Score: 75.9 bits (185), Expect = 2.6e-11
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 3

Query: 3   IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSE 62
           IEE+SE+LLQ+SY ISDSL +TG QIQ++AQTSRKLEDHMG VL HSE
Sbjct: 181 IEEKSETLLQSSYEISDSLNSTGTQIQKMAQTSRKLEDHMGIVLKHSE 228

Query: 63  122
           
Sbjct: 241 228

Query: 123 147
           
Sbjct: 301 228

BLAST of CU139755 vs. TrEMBL
Match: A0A0A0KT36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001620 PE=4 SV=1)

HSP 1 Score: 41.2 bits (95), Expect = 7.2e-01
Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 2

Query: 161 KSRRMETSQLELQEGQLKAEKEVWEEGMEM 220
           +S+++ETSQLELQEGQLK  K + EEGMEM
Sbjct: 233 QSKKIETSQLELQEGQLKLRKTL-EEGMEM 261

Query: 221 251
           
Sbjct: 293 261

BLAST of CU139755 vs. NCBI nr
Match: gi|700202340|gb|KGN57473.1| (hypothetical protein Csa_3G194400 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-17
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 3

Query: 3   IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSEK 62
           IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSEK
Sbjct: 148 IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSEK 196

Query: 63  122
           
Sbjct: 208 196

Query: 123 150
           
Sbjct: 268 196

BLAST of CU139755 vs. NCBI nr
Match: gi|778688567|ref|XP_011652779.1| (PREDICTED: protein GAMETE EXPRESSED 1-like [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-17
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 3

Query: 3   IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSEK 62
           IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSEK
Sbjct: 90  IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSEK 138

Query: 63  122
           
Sbjct: 150 138

Query: 123 150
           
Sbjct: 210 138

BLAST of CU139755 vs. NCBI nr
Match: gi|659108741|ref|XP_008454365.1| (PREDICTED: protein GAMETE EXPRESSED 1 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 5.8e-12
Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 3

Query: 3   IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSE 62
           IEE+SESLLQNSY ISDSL++TG QIQ++AQTSRKLEDHMG VL HSE
Sbjct: 181 IEEKSESLLQNSYEISDSLKSTGTQIQKMAQTSRKLEDHMGVVLKHSE 228

Query: 63  122
           
Sbjct: 241 228

Query: 123 147
           
Sbjct: 301 228

BLAST of CU139755 vs. NCBI nr
Match: gi|700197637|gb|KGN52795.1| (hypothetical protein Csa_4G001620 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 8.4e-11
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 3

Query: 3   IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSE 62
           IEE+SE+LLQ+SY ISDSL +TG QIQ++AQTSRKLEDHMG VL HSE
Sbjct: 181 IEEKSETLLQSSYEISDSLNSTGTQIQKMAQTSRKLEDHMGIVLKHSE 228

Query: 63  122
           
Sbjct: 241 228

Query: 123 147
           
Sbjct: 301 228

BLAST of CU139755 vs. NCBI nr
Match: gi|449469316|ref|XP_004152367.1| (PREDICTED: protein GAMETE EXPRESSED 1 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 8.4e-11
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 3

Query: 3   IEERSESLLQNSYHISDSLETTGIQIQQVAQTSRKLEDHMGAVLHHSE 62
           IEE+SE+LLQ+SY ISDSL +TG QIQ++AQTSRKLEDHMG VL HSE
Sbjct: 181 IEEKSETLLQSSYEISDSLNSTGTQIQKMAQTSRKLEDHMGIVLKHSE 228

Query: 63  122
           
Sbjct: 241 228

Query: 123 147
           
Sbjct: 301 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L6W7_CUCSA3.8e-18100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G194400 PE=4 SV=1[more]
A0A0A0L6W7_CUCSA2.9e-0268.57Uncharacterized protein OS=Cucumis sativus GN=Csa_3G194400 PE=4 SV=1[more]
A0A0A0KT36_CUCSA7.2e-0170.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001620 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202340|gb|KGN57473.1|1.2e-17100.00hypothetical protein Csa_3G194400 [Cucumis sativus][more]
gi|778688567|ref|XP_011652779.1|1.2e-17100.00PREDICTED: protein GAMETE EXPRESSED 1-like [Cucumis sativus][more]
gi|659108741|ref|XP_008454365.1|5.8e-1281.25PREDICTED: protein GAMETE EXPRESSED 1 [Cucumis melo][more]
gi|700197637|gb|KGN52795.1|8.4e-1177.08hypothetical protein Csa_4G001620 [Cucumis sativus][more]
gi|449469316|ref|XP_004152367.1|8.4e-1177.08PREDICTED: protein GAMETE EXPRESSED 1 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G194400Csa3G194400gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0065632G0065632EST