CU139342 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU139342
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Flavin-containing monooxygenase
Location	Chr3 : 13355961 .. 13357796 (-)
Sequence length	234

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GGGGATTTGATGCATTCAACTAAGTTTAAAATCGGGAAAAGGGTTTGAAGGGAAGAATGTGTTGGTTGTTGGGTCGGGAAATTCAGGGATGGAAATTGCTTTGGATCTTTGTCTTCATGCTGCTAATACTTCTGTTCTTGTTCGAAGCCCGGTGCATTTCATGTCGAAAGGAATGATGACGTTGGGATTGGATATGTTGAAGTACAATTTGCCAATTTTGGTTTGTGGATTCAT

Library


Library category	ESTs
gynoecious flower library	1

Homology

[Close]

BLAST of CU139342 vs. Swiss-Prot
Match: YUC10_ARATH (Probable indole-3-pyruvate monooxygenase YUCCA10 OS=Arabidopsis thaliana GN=YUC10 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-13
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKY 88
           KSG+ F+ KNVLVVG GNSGMEI+ DLC   ANT++L+R+P H ++K ++ LG+ +LKY
Sbjct: 163 KSGRDFKDKNVLVVGGGNSGMEISFDLCNFGANTTILIRTPRHVVTKEVIHLGMTLLKY 221

Query: 89   148
           
Sbjct: 223  221

Query: 149  206
           
Sbjct: 283  221

[Close]

BLAST of CU139342 vs. Swiss-Prot
Match: YUC3_ARATH (Probable indole-3-pyruvate monooxygenase YUCCA3 OS=Arabidopsis thaliana GN=YUC3 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.9e-10
Identity = 34/64 (53.12%), Postives = 41/64 (64.06%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFM-----SKGMMTLGLD 88
           KSG  ++GK VLVVG GNSGME++LDL  H AN S++VRS VH +      K    LG+ 
Sbjct: 198 KSGGRYQGKKVLVVGCGNSGMEVSLDLYNHGANPSMVVRSAVHVLPREIFGKSTFELGVT 257

Query: 89  MLKY 148
           M+KY
Sbjct: 258 MMKY 261

Query: 149  206
           
Sbjct: 318  261

[Close]

BLAST of CU139342 vs. Swiss-Prot
Match: YUC11_ARATH (Probable indole-3-pyruvate monooxygenase YUCCA11 OS=Arabidopsis thaliana GN=YUC11 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.6e-10
Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKY 88
           K+G+ F GK+VLVVG GNSGMEIA DL    AN S++VRS VH +++ ++ +G+ +L++
Sbjct: 166 KNGEKFAGKDVLVVGCGNSGMEIAYDLSKCNANVSIVVRSQVHVLTRCIVRIGMSLLRF 224

Query: 89   148
           
Sbjct: 226  224

Query: 149  206
           
Sbjct: 286  224

[Close]

BLAST of CU139342 vs. Swiss-Prot
Match: YUC7_ARATH (Probable indole-3-pyruvate monooxygenase YUCCA7 OS=Arabidopsis thaliana GN=YUC7 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-09
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVH-----FMSKGMMTLGLD 88
           KSG+ + GK VLVVG GNSGME++LDLC H A+ S++VRS VH      + K    L + 
Sbjct: 193 KSGERYRGKRVLVVGCGNSGMEVSLDLCNHDASPSMVVRSSVHVLPREVLGKSTFELSVT 252

Query: 89  MLKY 148
           M+K+
Sbjct: 253 MMKW 256

Query: 149  206
           
Sbjct: 313  256

[Close]

BLAST of CU139342 vs. Swiss-Prot
Match: YUC9_ARATH (Probable indole-3-pyruvate monooxygenase YUCCA9 OS=Arabidopsis thaliana GN=YUC9 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.3e-09
Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSK---GMMTLGLDML 88
           KSG+ F GK VLVVG GNSGME++LDL  H A TS++VRS VH + +   G  T G+ ++
Sbjct: 182 KSGEKFRGKRVLVVGCGNSGMEVSLDLANHNAITSMVVRSSVHVLPREIMGKSTFGISVM 241

Query: 89   148
           
Sbjct: 242  241

Query: 149  200
           
Sbjct: 302  241

[Close]

BLAST of CU139342 vs. TrEMBL
Match: A0A0A0L6W1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G190380 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.2e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKYN 88
           KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKYN
Sbjct: 164 KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKYN 223

Query: 89  LPI 148
           LPI
Sbjct: 224 LPI 226

Query: 149  208
           
Sbjct: 284  226

Query: 209  218
           
Sbjct: 344  226

[Close]

BLAST of CU139342 vs. TrEMBL
Match: A0A0L9UAE6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g289400 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.8e-15
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKY 88
           KSGK F+ ++VLVVGSGNSGMEIALDL  H A TS+LVRSPVHF+S+GM++LGL +LKY
Sbjct: 168 KSGKEFQDEHVLVVGSGNSGMEIALDLVNHGAKTSILVRSPVHFLSRGMVSLGLFLLKY 226

Query: 89   148
           
Sbjct: 228  226

Query: 149  206
           
Sbjct: 288  226

[Close]

BLAST of CU139342 vs. TrEMBL
Match: V7CXX6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G202100g PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-14
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 2


Query: 32  SGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKY 91
           SGK F+ K+VLVVGSGNSGMEIALDL  H A TS+LVRSPVHF+S+GM+ LGL +LKY
Sbjct: 169 SGKEFKDKHVLVVGSGNSGMEIALDLINHGAKTSILVRSPVHFVSRGMVRLGLFLLKY 226

Query: 92   151
           
Sbjct: 229  226

Query: 152  206
           
Sbjct: 289  226

[Close]

BLAST of CU139342 vs. TrEMBL
Match: M5VJ66_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007054mg PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-14
Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKY 88
           KSGKGF  KNVLVVGSGNSGMEIALDL  H A TS++VRSPVH +S+GM+ L L +LK+
Sbjct: 170 KSGKGFRNKNVLVVGSGNSGMEIALDLANHGAKTSIIVRSPVHVLSRGMVYLALVLLKH 228

Query: 89   148
           
Sbjct: 230  228

Query: 149  206
           
Sbjct: 290  228

[Close]

BLAST of CU139342 vs. TrEMBL
Match: A0A0B0PVY0_GOSAR (Flavin-containing monooxygenase YUCCA10-like protein OS=Gossypium arboreum GN=F383_09630 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.3e-14
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKY 88
           K+GK F  KNVLVVGSGNSGMEIA+DL  H A TS++VRSPVH +S+ M+ LGL++LKY
Sbjct: 164 KNGKAFRDKNVLVVGSGNSGMEIAMDLANHGAKTSIVVRSPVHILSREMVYLGLNLLKY 222

Query: 89   148
           
Sbjct: 224  222

Query: 149  206
           
Sbjct: 284  222

[Close]

BLAST of CU139342 vs. NCBI nr
Match: gi|778679924|ref|XP_011651215.1| (PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 6.0e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKYN 88
           KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKYN
Sbjct: 164 KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKYN 223

Query: 89  LPI 148
           LPI
Sbjct: 224 LPI 226

Query: 149  208
           
Sbjct: 284  226

Query: 209  218
           
Sbjct: 344  226

[Close]

BLAST of CU139342 vs. NCBI nr
Match: gi|659123221|ref|XP_008461553.1| (PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-23
Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKYN 88
           KSGKGFEGKNVLVVG+GNSGMEIALDLCLHAANTS++VRSPVHFMS+ M+ LGLDMLKYN
Sbjct: 164 KSGKGFEGKNVLVVGAGNSGMEIALDLCLHAANTSLVVRSPVHFMSRRMIGLGLDMLKYN 223

Query: 89  LPI 148
           LPI
Sbjct: 224 LPI 226

Query: 149  208
           
Sbjct: 284  226

Query: 209  218
           
Sbjct: 344  226

[Close]

BLAST of CU139342 vs. NCBI nr
Match: gi|920696287|gb|KOM39512.1| (hypothetical protein LR48_Vigan03g289400 [Vigna angularis])

HSP 1 Score: 88.6 bits (218), Expect = 5.2e-15
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKY 88
           KSGK F+ ++VLVVGSGNSGMEIALDL  H A TS+LVRSPVHF+S+GM++LGL +LKY
Sbjct: 168 KSGKEFQDEHVLVVGSGNSGMEIALDLVNHGAKTSILVRSPVHFLSRGMVSLGLFLLKY 226

Query: 89   148
           
Sbjct: 228  226

Query: 149  206
           
Sbjct: 288  226

[Close]

BLAST of CU139342 vs. NCBI nr
Match: gi|950950596|ref|XP_014495430.1| (PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Vigna radiata var. radiata])

HSP 1 Score: 88.2 bits (217), Expect = 6.8e-15
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKY 88
           KSGK F+ ++VLVVGSGNSGMEIALDL  H A TS+LVRSPVHF+S+GM++LGL +LKY
Sbjct: 168 KSGKEFKDEHVLVVGSGNSGMEIALDLVNHGAKTSILVRSPVHFLSRGMVSLGLFLLKY 226

Query: 89   148
           
Sbjct: 228  226

Query: 149  206
           
Sbjct: 288  226

[Close]

BLAST of CU139342 vs. NCBI nr
Match: gi|645258651|ref|XP_008234984.1| (PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Prunus mume])

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-14
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 2


Query: 29  KSGKGFEGKNVLVVGSGNSGMEIALDLCLHAANTSVLVRSPVHFMSKGMMTLGLDMLKY 88
           KSGKGF+ KNVLVVGSGNSGMEIALDL  H A TS++VRSPVH +S+GM+ L L +LK+
Sbjct: 170 KSGKGFKNKNVLVVGSGNSGMEIALDLANHGAKTSIIVRSPVHVLSRGMVYLALVLLKH 228

Query: 89   148
           
Sbjct: 230  228

Query: 149  206
           
Sbjct: 290  228

The following BLAST results are available for this feature:

BLAST of CU139342 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YUC10_ARATH	2.9e-13	57.63	Probable indole-3-pyruvate monooxygenase YUCCA10 OS=Arabidopsis thaliana GN=YUC1...	[more]
YUC3_ARATH	3.9e-10	53.13	Probable indole-3-pyruvate monooxygenase YUCCA3 OS=Arabidopsis thaliana GN=YUC3 ...	[more]
YUC11_ARATH	6.6e-10	50.85	Probable indole-3-pyruvate monooxygenase YUCCA11 OS=Arabidopsis thaliana GN=YUC1...	[more]
YUC7_ARATH	1.9e-09	50.00	Probable indole-3-pyruvate monooxygenase YUCCA7 OS=Arabidopsis thaliana GN=YUC7 ...	[more]
YUC9_ARATH	3.3e-09	53.33	Probable indole-3-pyruvate monooxygenase YUCCA9 OS=Arabidopsis thaliana GN=YUC9 ...	[more]

BLAST of CU139342 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6W1_CUCSA	4.2e-27	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G190380 PE=4 SV=1	[more]
A0A0L9UAE6_PHAAN	2.8e-15	72.88	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g289400 PE=4 SV=1	[more]
V7CXX6_PHAVU	1.1e-14	74.14	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G202100g PE=4 SV=1	[more]
M5VJ66_PRUPE	1.4e-14	71.19	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007054mg PE=4 SV=1	[more]
A0A0B0PVY0_GOSAR	5.3e-14	67.80	Flavin-containing monooxygenase YUCCA10-like protein OS=Gossypium arboreum GN=F3...	[more]

BLAST of CU139342 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778679924\|ref\|XP_011651215.1\|	6.0e-27	100.00	PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Cucumis sativus]	[more]
gi\|659123221\|ref\|XP_008461553.1\|	2.3e-23	88.89	PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Cucumis melo]	[more]
gi\|920696287\|gb\|KOM39512.1\|	5.2e-15	72.88	hypothetical protein LR48_Vigan03g289400 [Vigna angularis]	[more]
gi\|950950596\|ref\|XP_014495430.1\|	6.8e-15	72.88	PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Vigna radiata var. ...	[more]
gi\|645258651\|ref\|XP_008234984.1\|	2.0e-14	71.19	PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa3G190380	Csa3G190380	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
G0061049	G0061049	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23023	DIMETHYLANILINE MONOOXYGENASE	coord: 1..43 score: 4.1
None	No IPR available	PANTHER	PTHR23023:SF142	SUBFAMILY NOT NAMED	coord: 1..43 score: 4.1