CU138343 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU138343
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 24651829 .. 24652040 (+)
Sequence length216
The following sequences are available for this feature:

transcribed_cluster sequence

AATCAAAAGTTCAAGTTTATAAATATCCATCGTGGCCAAATGTTCCTTCAACTCAAACAACAAACAGATTCAATAGAAGTTCGCTAGGATTGCTAAAAACTTCCCTCTTTCTAATTCAAAACCATGGCTGTTTTCAACAGTTGCTTGAAGTTCTTATTAATCGTATCCTTGTCATTGGCAAGCATCAACATGAACTTTGCTAGTTCTCGTCGCCTT
Library categoryESTs
gynoecious flower library1
BLAST of CU138343 vs. TrEMBL
Match: A0A0A0KLS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499075 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-09
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = -2

Query: 114 RRRELAKFMLMLANDKDTINKNFKQLLKTAMVLN 173
           RRRELAKFMLMLANDKDTINKNFKQLLKTAMVLN
Sbjct: 73  RRRELAKFMLMLANDKDTINKNFKQLLKTAMVLN 106

Query: 174 216
           
Sbjct: 133 106

BLAST of CU138343 vs. TrEMBL
Match: A0A0A0KJZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499070 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.6e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1

Query: 124 MAVFNSCLKFLLIVSLSLASINMNFASSRRL 183
           MAVFNSCLKFLLIVSLSLASINMNFASSRRL
Sbjct: 1   MAVFNSCLKFLLIVSLSLASINMNFASSRRL 31

Query: 184 217
           
Sbjct: 61  31

BLAST of CU138343 vs. NCBI nr
Match: gi|700193507|gb|KGN48711.1| (hypothetical protein Csa_6G499075 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 5.2e-09
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = -2

Query: 114 RRRELAKFMLMLANDKDTINKNFKQLLKTAMVLN 173
           RRRELAKFMLMLANDKDTINKNFKQLLKTAMVLN
Sbjct: 73  RRRELAKFMLMLANDKDTINKNFKQLLKTAMVLN 106

Query: 174 216
           
Sbjct: 133 106

BLAST of CU138343 vs. NCBI nr
Match: gi|700193508|gb|KGN48712.1| (hypothetical protein Csa_6G499070 [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-06
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1

Query: 124 MAVFNSCLKFLLIVSLSLASINMNFASSRRL 183
           MAVFNSCLKFLLIVSLSLASINMNFASSRRL
Sbjct: 1   MAVFNSCLKFLLIVSLSLASINMNFASSRRL 31

Query: 184 217
           
Sbjct: 61  31

BLAST of CU138343 vs. NCBI nr
Match: gi|659081034|ref|XP_008441114.1| (PREDICTED: rRNA 2'-O-methyltransferase fibrillarin-like [Cucumis melo])

HSP 1 Score: 57.8 bits (138), Expect = 9.1e-06
Identity = 29/34 (85.29%), Postives = 29/34 (85.29%), Query Frame = -2

Query: 114 RRRELAKFMLMLANDKDTINKNFKQLLKTAMVLN 173
           RRRELAKF LMLANDKD  N NFKQLLK AMVLN
Sbjct: 100 RRRELAKFTLMLANDKDANNNNFKQLLKAAMVLN 133

Query: 174 216
           
Sbjct: 160 133

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KLS6_CUCSA2.8e-09100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499075 PE=4 SV=1[more]
A0A0A0KJZ2_CUCSA7.6e-07100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499070 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700193507|gb|KGN48711.1|5.2e-09100.00hypothetical protein Csa_6G499075 [Cucumis sativus][more]
gi|700193508|gb|KGN48712.1|5.4e-06100.00hypothetical protein Csa_6G499070 [Cucumis sativus][more]
gi|659081034|ref|XP_008441114.1|9.1e-0685.29PREDICTED: rRNA 2'-O-methyltransferase fibrillarin-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G499070Csa6G499070gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0048850G0048850EST