CU137808 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU137808
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 15213131 .. 15213994 (-)
Sequence length276
The following sequences are available for this feature:

transcribed_cluster sequence

TTCAGAAAGATAAGGCCTTCTAGTTCTTTCACTCTCCAATTCTTCCTCTTTTTTCTCTCTTAACCCTGGAATTATGTCAACCACTGTTGGGTTTATATCTTTTTTGTCAAATGTGAATCCTAAGTCCTTGAAACCTTGCAGTTCTTCTGATTCTAATTCACTTTGGCTCCTTCTCTTCCTCATTTGGATGAGAAATTGGTGCCACATTTCGTCACTGCTTGTCGGGATTCGACACATTGGGAGGCTGAACTTCTTTTCAAGAAACTCTTGTCTCCC
Library categoryESTs
gynoecious flower library1
BLAST of CU137808 vs. TrEMBL
Match: A0A0A0LC64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236040 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-26
Identity = 64/91 (70.33%), Postives = 64/91 (70.33%), Query Frame = -1

Query: 1   RQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRXXXXXXXXXXXGFKDLGFTFDKKDI 60
           RQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRR           GFKDLGFTFDKKDI
Sbjct: 354 RQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRSQSELESEELQGFKDLGFTFDKKDI 413

Query: 61  NPTVVDIIPGXXXXXXXXXXXXXXXXPYLSE 120
           NPTVVDIIPG                PYLSE
Sbjct: 414 NPTVVDIIPGLREKKEEELESERTRRPYLSE 444

Query: 121 180
           
Sbjct: 474 444

Query: 181 240
           
Sbjct: 534 444

Query: 241 274
           
Sbjct: 594 444

BLAST of CU137808 vs. NCBI nr
Match: gi|778688583|ref|XP_011652784.1| (PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 9.3e-27
Identity = 64/91 (70.33%), Postives = 64/91 (70.33%), Query Frame = -1

Query: 1   RQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRXXXXXXXXXXXGFKDLGFTFDKKDI 60
           RQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRR           GFKDLGFTFDKKDI
Sbjct: 354 RQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRSQSELESEELQGFKDLGFTFDKKDI 413

Query: 61  NPTVVDIIPGXXXXXXXXXXXXXXXXPYLSE 120
           NPTVVDIIPG                PYLSE
Sbjct: 414 NPTVVDIIPGLREKKEEELESERTRRPYLSE 444

Query: 121 180
           
Sbjct: 474 444

Query: 181 240
           
Sbjct: 534 444

Query: 241 274
           
Sbjct: 594 444

BLAST of CU137808 vs. NCBI nr
Match: gi|700202503|gb|KGN57636.1| (hypothetical protein Csa_3G236040 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 9.3e-27
Identity = 64/91 (70.33%), Postives = 64/91 (70.33%), Query Frame = -1

Query: 1   RQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRXXXXXXXXXXXGFKDLGFTFDKKDI 60
           RQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRR           GFKDLGFTFDKKDI
Sbjct: 354 RQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRSQSELESEELQGFKDLGFTFDKKDI 413

Query: 61  NPTVVDIIPGXXXXXXXXXXXXXXXXPYLSE 120
           NPTVVDIIPG                PYLSE
Sbjct: 414 NPTVVDIIPGLREKKEEELESERTRRPYLSE 444

Query: 121 180
           
Sbjct: 474 444

Query: 181 240
           
Sbjct: 534 444

Query: 241 274
           
Sbjct: 594 444

BLAST of CU137808 vs. NCBI nr
Match: gi|659112411|ref|XP_008456207.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 8.7e-17
Identity = 45/62 (72.58%), Postives = 46/62 (74.19%), Query Frame = -1

Query: 88  RQEFLEKKFSLPMCRIPTSSDEMWHQFLIQMRKRRXXXXXXXXXXXGFKDLGFTFDKKDI 147
           RQE LEK FSLPMCRIPTSSDE+WHQFLIQMRKRR           GFKDLGFTFDKK  
Sbjct: 324 RQEILEKNFSLPMCRIPTSSDEVWHQFLIQMRKRRSQSELESEEVQGFKDLGFTFDKKRY 383

Query: 148 NP 207
            P
Sbjct: 384 KP 385

Query: 208 267
           
Sbjct: 444 385

Query: 268 274
           
Sbjct: 504 385

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LC64_CUCSA1.4e-2670.33Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236040 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778688583|ref|XP_011652784.1|9.3e-2770.33PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus][more]
gi|700202503|gb|KGN57636.1|9.3e-2770.33hypothetical protein Csa_3G236040 [Cucumis sativus][more]
gi|659112411|ref|XP_008456207.1|8.7e-1772.58PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496210 [Cucumis me... [more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G236040Csa3G236040gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0042551G0042551EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33785FAMILY NOT NAMEDcoord: 23..92
score: 3.8
NoneNo IPR availablePANTHERPTHR33785:SF1GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F4B12coord: 23..92
score: 3.8