CU137627 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU137627
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 4362007 .. 4362170 (+)
Sequence length163
The following sequences are available for this feature:

transcribed_cluster sequence

CTGCATTCAAGAATCGCTCGATTCGATCGAGAAACGTTTTTCGTCAGAGACGGTTGAATCGATCGCCTCTAACGTTCTCGCATTGAGACCGCCATTTTCCGATCTGGAAAAACGCGATTTCGCGTTAATCCACGACGATTACACGGCGATTTCTCATCGACTA
Library categoryESTs
gynoecious flower library1
BLAST of CU137627 vs. TrEMBL
Match: A0A0A0K8R1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G056530 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-20
Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 2

Query: 2   CIQESLDSIEKRFSSETVESIASNVLALRPPFSDLEKRDFALIHDDYTAISHRL 61
           CIQESLDSIEK FSSETVESIASNVLALRPPFSDLEKRDFALIHDDYTAISHRL
Sbjct: 136 CIQESLDSIEKCFSSETVESIASNVLALRPPFSDLEKRDFALIHDDYTAISHRL 189

Query: 62  121
           
Sbjct: 196 189

Query: 122 164
           
Sbjct: 256 189

BLAST of CU137627 vs. NCBI nr
Match: gi|778722006|ref|XP_011658390.1| (PREDICTED: UPF0496 protein At3g49070-like [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 2.9e-20
Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 2

Query: 2   CIQESLDSIEKRFSSETVESIASNVLALRPPFSDLEKRDFALIHDDYTAISHRL 61
           CIQESLDSIEK FSSETVESIASNVLALRPPFSDLEKRDFALIHDDYTAISHRL
Sbjct: 136 CIQESLDSIEKCFSSETVESIASNVLALRPPFSDLEKRDFALIHDDYTAISHRL 189

Query: 62  121
           
Sbjct: 196 189

Query: 122 164
           
Sbjct: 256 189

BLAST of CU137627 vs. NCBI nr
Match: gi|659081782|ref|XP_008441510.1| (PREDICTED: UPF0496 protein At3g49070-like [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-18
Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 2

Query: 2   CIQESLDSIEKRFSSETVESIASNVLALRPPFSDLEKRDFALIHDDYTAISHRL 61
           CIQESLDSIEK FSSETVESIASN+LALR PFSDLEKRDFALIHDDYT ISHRL
Sbjct: 151 CIQESLDSIEKCFSSETVESIASNLLALRSPFSDLEKRDFALIHDDYTTISHRL 204

Query: 62  121
           
Sbjct: 211 204

Query: 122 164
           
Sbjct: 271 204

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K8R1_CUCSA2.0e-2098.15Uncharacterized protein OS=Cucumis sativus GN=Csa_6G056530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778722006|ref|XP_011658390.1|2.9e-2098.15PREDICTED: UPF0496 protein At3g49070-like [Cucumis sativus][more]
gi|659081782|ref|XP_008441510.1|1.6e-1892.59PREDICTED: UPF0496 protein At3g49070-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G056530Csa6G056530gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0040332G0040332EST