CU137145 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU137145
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 248357 .. 249016 (-)
Sequence length252
The following sequences are available for this feature:

transcribed_cluster sequence

ATTTATCTGATCTCTGATGCCCAAGCTTTCGATATATCATCGCTTTCAGCTCGGAAGTGTCTATACGAGAAGTGTCTTTCCTGGGAAGCATTTTCAGAGCCGCAATTCCAGCAATGGCTGAATTTGAGACAAAGCCCTCAGGAATCCTCCACCAACAAAACAGATAAAAAAGAATTGAAATGAAATTGCGCCGTCTTGTGAATGAAGAATCGTAAAATTAAGATGATTTTGTGTAAAATTGTTTAATGGGTT
Library categoryESTs
gynoecious flower library1
BLAST of CU137145 vs. TrEMBL
Match: A0A0A0KWF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000960 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.1e-24
Identity = 62/83 (74.70%), Postives = 62/83 (74.70%), Query Frame = -3

Query: 2   PIKQFYTKSS*FYDSSFTRRRNFISILFYLFCWWRIPEGFVSNSAIAGIAALKMLPRKDT 61
           PIKQF      F               FYLFCWWRIPEGFVSNSAIAGIAALKMLPRKDT
Sbjct: 54  PIKQFTQNHLNFTILHSQDGAISFQFFFYLFCWWRIPEGFVSNSAIAGIAALKMLPRKDT 113

Query: 62  SRIDTSELKAMIYRKLGHQRSDK 121
           SRIDTSELKAMIYRKLGHQRSDK
Sbjct: 114 SRIDTSELKAMIYRKLGHQRSDK 136

Query: 122 181
           
Sbjct: 174 136

Query: 182 241
           
Sbjct: 234 136

Query: 242 251
           
Sbjct: 294 136

BLAST of CU137145 vs. NCBI nr
Match: gi|700197619|gb|KGN52777.1| (hypothetical protein Csa_4G000960 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 3.0e-24
Identity = 62/83 (74.70%), Postives = 62/83 (74.70%), Query Frame = -3

Query: 2   PIKQFYTKSS*FYDSSFTRRRNFISILFYLFCWWRIPEGFVSNSAIAGIAALKMLPRKDT 61
           PIKQF      F               FYLFCWWRIPEGFVSNSAIAGIAALKMLPRKDT
Sbjct: 54  PIKQFTQNHLNFTILHSQDGAISFQFFFYLFCWWRIPEGFVSNSAIAGIAALKMLPRKDT 113

Query: 62  SRIDTSELKAMIYRKLGHQRSDK 121
           SRIDTSELKAMIYRKLGHQRSDK
Sbjct: 114 SRIDTSELKAMIYRKLGHQRSDK 136

Query: 122 181
           
Sbjct: 174 136

Query: 182 241
           
Sbjct: 234 136

Query: 242 251
           
Sbjct: 294 136

BLAST of CU137145 vs. NCBI nr
Match: gi|449469122|ref|XP_004152270.1| (PREDICTED: uncharacterized protein LOC101211126 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-07
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = -3

Query: 2  MLPRKDTSRIDTSELKAMIYRKLGHQRSDK 61
          MLPRKDTSRIDTSELKAMIYRKLGHQRSDK
Sbjct: 1  MLPRKDTSRIDTSELKAMIYRKLGHQRSDK 30

Query: 62 92
          
Sbjct: 61 30

BLAST of CU137145 vs. NCBI nr
Match: gi|659108776|ref|XP_008454383.1| (PREDICTED: uncharacterized protein LOC103494799 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 7.4e-07
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = -3

Query: 2  MLPRKDTSRIDTSELKAMIYRKLGHQRSDK 61
          M PRKDTSRIDTSELKAMIYRKLGHQRSDK
Sbjct: 1  MFPRKDTSRIDTSELKAMIYRKLGHQRSDK 30

Query: 62 92
          
Sbjct: 61 30

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KWF9_CUCSA2.1e-2474.70Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000960 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700197619|gb|KGN52777.1|3.0e-2474.70hypothetical protein Csa_4G000960 [Cucumis sativus][more]
gi|449469122|ref|XP_004152270.1|2.5e-07100.00PREDICTED: uncharacterized protein LOC101211126 [Cucumis sativus][more]
gi|659108776|ref|XP_008454383.1|7.4e-0796.67PREDICTED: uncharacterized protein LOC103494799 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G000960Csa4G000960gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0034398G0034398EST