CU136128 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU136128
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 15371744 .. 15371849 (+)
Sequence length109
The following sequences are available for this feature:

transcribed_cluster sequence

AGTAGTAGTCTTGCATCGTTCATTAAACCCCCAATGTGTTGGCGAAGCTTCCTCCTTTCAATCAACCACCGTTGCTCCTGAGCAGCAAAGATGCAAACAACTTTTTCAC
Library categoryESTs
gynoecious flower library1
BLAST of CU136128 vs. TrEMBL
Match: A0A0A0LAI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239260 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.2e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = -3

Query: 3   EKVVCIFAAQEQRWLIERRKLRQHIGGLMNDARLL 62
           EKVVCIFAAQEQRWLIERRKLRQHIGGLMNDARLL
Sbjct: 108 EKVVCIFAAQEQRWLIERRKLRQHIGGLMNDARLL 142

Query: 63  108
           
Sbjct: 168 142

BLAST of CU136128 vs. TrEMBL
Match: E5GBA4_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.4e-11
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = -3

Query: 3   EKVVCIFAAQEQRWLIERRKLRQHIGGLMNDARLL 62
           EKVVCIFAAQEQRWLIER+KLRQHIGGLMNDARLL
Sbjct: 108 EKVVCIFAAQEQRWLIERKKLRQHIGGLMNDARLL 142

Query: 63  108
           
Sbjct: 168 142

BLAST of CU136128 vs. TrEMBL
Match: B9I1X1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s02370g PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.1e-06
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = -3

Query: 3   EKVVCIFAAQEQRWLIERRKLRQHIGGLMNDARLL 62
           EKVV I+A+QEQ WLIER+KLRQHIG LMN+ R L
Sbjct: 107 EKVVSIYASQEQNWLIERKKLRQHIGALMNELRFL 141

Query: 63  108
           
Sbjct: 167 141

BLAST of CU136128 vs. NCBI nr
Match: gi|778680446|ref|XP_011651318.1| (PREDICTED: myosin heavy chain, striated muscle [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 6.1e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = -3

Query: 3   EKVVCIFAAQEQRWLIERRKLRQHIGGLMNDARLL 62
           EKVVCIFAAQEQRWLIERRKLRQHIGGLMNDARLL
Sbjct: 108 EKVVCIFAAQEQRWLIERRKLRQHIGGLMNDARLL 142

Query: 63  108
           
Sbjct: 168 142

BLAST of CU136128 vs. NCBI nr
Match: gi|659133640|ref|XP_008466834.1| (PREDICTED: myosin heavy chain, striated muscle [Cucumis melo])

HSP 1 Score: 72.8 bits (177), Expect = 1.4e-10
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = -3

Query: 3   EKVVCIFAAQEQRWLIERRKLRQHIGGLMNDARLL 62
           EKVVCIFAAQEQRWLIER+KLRQHIGGLMNDARLL
Sbjct: 108 EKVVCIFAAQEQRWLIERKKLRQHIGGLMNDARLL 142

Query: 63  108
           
Sbjct: 168 142

BLAST of CU136128 vs. NCBI nr
Match: gi|224118294|ref|XP_002317783.1| (hypothetical protein POPTR_0012s02370g [Populus trichocarpa])

HSP 1 Score: 57.4 bits (137), Expect = 5.9e-06
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = -3

Query: 3   EKVVCIFAAQEQRWLIERRKLRQHIGGLMNDARLL 62
           EKVV I+A+QEQ WLIER+KLRQHIG LMN+ R L
Sbjct: 107 EKVVSIYASQEQNWLIERKKLRQHIGALMNELRFL 141

Query: 63  108
           
Sbjct: 167 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LAI2_CUCSA4.2e-11100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239260 PE=4 SV=1[more]
E5GBA4_CUCME9.4e-1197.14Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
B9I1X1_POPTR4.1e-0674.29Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s02370g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778680446|ref|XP_011651318.1|6.1e-11100.00PREDICTED: myosin heavy chain, striated muscle [Cucumis sativus][more]
gi|659133640|ref|XP_008466834.1|1.4e-1097.14PREDICTED: myosin heavy chain, striated muscle [Cucumis melo][more]
gi|224118294|ref|XP_002317783.1|5.9e-0674.29hypothetical protein POPTR_0012s02370g [Populus trichocarpa][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G239260Csa3G239260gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0021545G0021545EST