CU135879 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU135879
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 24751421 .. 24751586 (+)
Sequence length165
The following sequences are available for this feature:

transcribed_cluster sequence

GTACTTGAACATGGTGATTGAATCGATAGCCGATTGCTGAAGACCAACGGTGTTGATGTACCAAACGTGGTGGTCGATAACGGGTTCTTCTTCATCGTTATCGGGTAGATTCTCAGCTTGAACATCGAACAGAACCGGGAGACGATTATGTCTTGAATTACGATA
Library categoryESTs
gynoecious flower library1
BLAST of CU135879 vs. TrEMBL
Match: A0A0A0KK07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499220 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = -1

Query: 1   YRNSRHNRLPVLFDVQAENLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 60
           YRNSRHNRLPVLFDVQAENLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY
Sbjct: 100 YRNSRHNRLPVLFDVQAENLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 154

Query: 61  120
           
Sbjct: 160 154

Query: 121 166
           
Sbjct: 220 154

BLAST of CU135879 vs. TrEMBL
Match: A0A151S3C2_CAJCA (RING-H2 finger protein ATL1O OS=Cajanus cajan GN=KK1_029031 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.1e-08
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = -1

Query: 1   RNSRHNRLPVLFDVQAE-NLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 60
           RN R    P+LFDV  + N  DND E+  + H +WYI TVGLQQS IDSIT+F+Y
Sbjct: 68  RNRRDADAPILFDVNGDSNASDNDHEDLTVVHPIWYIRTVGLQQSLIDSITVFRY 122

Query: 61  120
           
Sbjct: 128 122

Query: 121 163
           
Sbjct: 188 122

BLAST of CU135879 vs. TrEMBL
Match: A0A0B2PG14_GLYSO (E3 ubiquitin-protein ligase RING1 OS=Glycine soja GN=glysoja_010898 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.6e-07
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = -1

Query: 1   RNSRHNRL--PVLFDVQAENLP----DNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 60
           RN+++ R+  P+LFD+  ++ P    D+D EE  + H +WYI TVGLQQS IDSIT+FKY
Sbjct: 31  RNNQNRRVDAPILFDLNGDSPPSSDNDDDVEELAVVHPIWYIRTVGLQQSLIDSITVFKY 90

Query: 61  120
           
Sbjct: 91  90

Query: 121 163
           
Sbjct: 151 90

BLAST of CU135879 vs. TrEMBL
Match: A0A0R0JX50_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G175400 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.6e-07
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = -1

Query: 1   RNSRHNRL--PVLFDVQAENLP----DNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 60
           RN+++ R+  P+LFD+  ++ P    D+D EE  + H +WYI TVGLQQS IDSIT+FKY
Sbjct: 82  RNNQNRRVDAPILFDLNGDSPPSSDNDDDVEELAVVHPIWYIRTVGLQQSLIDSITVFKY 141

Query: 61  120
           
Sbjct: 142 141

Query: 121 163
           
Sbjct: 202 141

BLAST of CU135879 vs. TrEMBL
Match: I1K4G5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.6e-07
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = -1

Query: 1   RNSRHNRL--PVLFDVQAENLP----DNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 60
           RN+++ R+  P+LFD+  ++ P    D+D EE  + H +WYI TVGLQQS IDSIT+FKY
Sbjct: 82  RNNQNRRVDAPILFDLNGDSPPSSDNDDDVEELAVVHPIWYIRTVGLQQSLIDSITVFKY 141

Query: 61  120
           
Sbjct: 142 141

Query: 121 163
           
Sbjct: 202 141

BLAST of CU135879 vs. NCBI nr
Match: gi|449451613|ref|XP_004143556.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 2.6e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = -1

Query: 1   YRNSRHNRLPVLFDVQAENLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 60
           YRNSRHNRLPVLFDVQAENLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY
Sbjct: 100 YRNSRHNRLPVLFDVQAENLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 154

Query: 61  120
           
Sbjct: 160 154

Query: 121 166
           
Sbjct: 220 154

BLAST of CU135879 vs. NCBI nr
Match: gi|659080025|ref|XP_008440570.1| (PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo])

HSP 1 Score: 114.0 bits (284), Expect = 8.3e-23
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = -1

Query: 1   YRNSRHNRLPVLFDVQAENLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 60
           YRNSRHNRLPVLFDVQ ENLPD+DEEEPVIDHHVWYINTVGLQQS IDSITMFKY
Sbjct: 104 YRNSRHNRLPVLFDVQGENLPDSDEEEPVIDHHVWYINTVGLQQSVIDSITMFKY 158

Query: 61  120
           
Sbjct: 164 158

Query: 121 166
           
Sbjct: 224 158

BLAST of CU135879 vs. NCBI nr
Match: gi|1012338027|gb|KYP49289.1| (RING-H2 finger protein ATL1O [Cajanus cajan])

HSP 1 Score: 65.1 bits (157), Expect = 4.4e-08
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = -1

Query: 1   RNSRHNRLPVLFDVQAE-NLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 60
           RN R    P+LFDV  + N  DND E+  + H +WYI TVGLQQS IDSIT+F+Y
Sbjct: 68  RNRRDADAPILFDVNGDSNASDNDHEDLTVVHPIWYIRTVGLQQSLIDSITVFRY 122

Query: 61  120
           
Sbjct: 128 122

Query: 121 163
           
Sbjct: 188 122

BLAST of CU135879 vs. NCBI nr
Match: gi|1009146148|ref|XP_015890724.1| (PREDICTED: RING-H2 finger protein ATL51-like [Ziziphus jujuba])

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-07
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = -1

Query: 1   NSRHNRLPVLFDVQAENLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 60
           NSR   LP++F  Q + L  +++  PVIDH +W+INTVGL QS IDSIT+FKY
Sbjct: 75  NSRTRNLPIIFHTQDDFL--DEDHGPVIDHPIWFINTVGLPQSIIDSITVFKY 125

Query: 61  120
           
Sbjct: 135 125

Query: 121 160
           
Sbjct: 195 125

BLAST of CU135879 vs. NCBI nr
Match: gi|1009146154|ref|XP_015890728.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba])

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-07
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = -1

Query: 1   NSRHNRLPVLFDVQAENLPDNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKY 60
           NSR   LP++F  Q + L  +++  PVIDH +W+INTVGL QS IDSIT+FKY
Sbjct: 106 NSRTRNLPIIFHTQDDFL--DEDHGPVIDHPIWFINTVGLPQSIIDSITVFKY 156

Query: 61  120
           
Sbjct: 166 156

Query: 121 160
           
Sbjct: 226 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KK07_CUCSA1.8e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499220 PE=4 SV=1[more]
A0A151S3C2_CAJCA3.1e-0856.36RING-H2 finger protein ATL1O OS=Cajanus cajan GN=KK1_029031 PE=4 SV=1[more]
A0A0B2PG14_GLYSO2.6e-0751.67E3 ubiquitin-protein ligase RING1 OS=Glycine soja GN=glysoja_010898 PE=4 SV=1[more]
A0A0R0JX50_SOYBN2.6e-0751.67Uncharacterized protein OS=Glycine max GN=GLYMA_05G175400 PE=4 SV=1[more]
I1K4G5_SOYBN2.6e-0751.67Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449451613|ref|XP_004143556.1|2.6e-24100.00PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
gi|659080025|ref|XP_008440570.1|8.3e-2394.55PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo][more]
gi|1012338027|gb|KYP49289.1|4.4e-0856.36RING-H2 finger protein ATL1O [Cajanus cajan][more]
gi|1009146148|ref|XP_015890724.1|1.7e-0756.60PREDICTED: RING-H2 finger protein ATL51-like [Ziziphus jujuba][more]
gi|1009146154|ref|XP_015890728.1|1.7e-0756.60PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G499220Csa6G499220gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0018779G0018779EST