CU132297 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU132297
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr5 : 86110 .. 86597 (+)
Sequence length	240

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CTCAAACACATTATTTATCTTCTTGTATTAGCAACTTTCTCACCAGAATGAGTGTCAATGGCAGATGCCACAACTCCATAGCTCCCTTTACCAACAACTTCTTCAATCTCGTATTGAGTAGCTTCACCATATTCAGTGAAAAATTCCTTTTCAATCATATTCTTTGAATAGTTGAAGTCAATTATAATCACAAACCACGGGAGCACTATTGAACTGTTCTTCAATTTCCATACTTTCCCC

Library


Library category	ESTs
fruit (8DPP) library	1

Homology

[Close]

BLAST of CU132297 vs. Swiss-Prot
Match: MPK9_ARATH (Mitogen-activated protein kinase 9 OS=Arabidopsis thaliana GN=MPK9 PE=2 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 3.5e-14
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = -2


Query: 30  YSKNMIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           + K  +E EFFTEYGEA++Y+I+EV+GKGSYGVVASAIDTHSGEKVA
Sbjct: 4   HKKVALETEFFTEYGEASRYQIQEVIGKGSYGVVASAIDTHSGEKVA 50

Query: 90   149
           
Sbjct: 64   50

Query: 150  171
           
Sbjct: 124  50

[Close]

BLAST of CU132297 vs. Swiss-Prot
Match: MPK12_ORYSJ (Mitogen-activated protein kinase 12 OS=Oryza sativa subsp. japonica GN=MPK12 PE=1 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 7.8e-14
Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = -2


Query: 30  NYSKNMIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           ++ KN +E EFFTEYGEA+QY+I+EV+GKGSYGVVA+A+DT +GE+VA
Sbjct: 67  SHKKNTVEMEFFTEYGEASQYQIQEVIGKGSYGVVAAAVDTRTGERVA 114

Query: 90   149
           
Sbjct: 127  114

Query: 150  174
           
Sbjct: 187  114

[Close]

BLAST of CU132297 vs. Swiss-Prot
Match: MPK13_ORYSJ (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. japonica GN=MPK13 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12
Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = -2


Query: 30  EFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           EFFTEYGEA+QY+I+EVVGKGSYGVVA+A+DTH+GE+VA
Sbjct: 2   EFFTEYGEASQYQIQEVVGKGSYGVVAAAVDTHTGERVA 40

Query: 90   147
           
Sbjct: 62   40

[Close]

BLAST of CU132297 vs. Swiss-Prot
Match: MPK13_ORYSI (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. indica GN=MPK13 PE=2 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12
Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = -2


Query: 30  EFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           EFFTEYGEA+QY+I+EVVGKGSYGVVA+A+DTH+GE+VA
Sbjct: 2   EFFTEYGEASQYQIQEVVGKGSYGVVAAAVDTHTGERVA 40

Query: 90   147
           
Sbjct: 62   40

[Close]

BLAST of CU132297 vs. Swiss-Prot
Match: MPK8_ARATH (Mitogen-activated protein kinase 8 OS=Arabidopsis thaliana GN=MPK8 PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-12
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = -2


Query: 30  EKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           E EFFTEYGEA +Y+I+EVVGKGSYGVVASA+D+H+GE+VA
Sbjct: 91  ETEFFTEYGEANRYQIQEVVGKGSYGVVASAVDSHTGERVA 131

Query: 90   149
           
Sbjct: 151  131

Query: 150  153
           
Sbjct: 211  131

[Close]

BLAST of CU132297 vs. TrEMBL
Match: A0A0A0KMF1_CUCSA (Mitogen-activated protein kinase OS=Cucumis sativus GN=Csa_5G002030 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.9e-15
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = -2


Query: 30  MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA
Sbjct: 1   MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 43

Query: 90   149
           
Sbjct: 61   43

Query: 150  159
           
Sbjct: 121  43

[Close]

BLAST of CU132297 vs. TrEMBL
Match: M5XB79_PRUPE (Mitogen-activated protein kinase OS=Prunus persica GN=PRUPE_ppa003297mg PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-14
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = -2


Query: 30  IIDFNYSKNMIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           +    + KNM++KEFFTEYGEA+QYEI+EV+GKGSYGVVASA+DTH+GEKVA
Sbjct: 72  LASMGHHKNMLDKEFFTEYGEASQYEIQEVIGKGSYGVVASAVDTHTGEKVA 123

Query: 90   149
           
Sbjct: 132  123

Query: 150  186
           
Sbjct: 192  123

[Close]

BLAST of CU132297 vs. TrEMBL
Match: W9QY19_9ROSA (Mitogen-activated protein kinase OS=Morus notabilis GN=L484_015619 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 9.2e-14
Identity = 40/54 (74.07%), Postives = 49/54 (90.74%), Query Frame = -2


Query: 30  VIIIDFNYSKNMIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           V+ I   ++K M++KEFFTEYGEA+QYEI+EVVGKGSYGVVASAIDTH+GE+VA
Sbjct: 72  VVAIMDPHNKIMLDKEFFTEYGEASQYEIQEVVGKGSYGVVASAIDTHTGERVA 125

Query: 90   149
           
Sbjct: 132  125

Query: 150  192
           
Sbjct: 192  125

[Close]

BLAST of CU132297 vs. TrEMBL
Match: D7T8T1_VITVI (Mitogen-activated protein kinase OS=Vitis vinifera GN=VIT_01s0011g04920 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-13
Identity = 37/48 (77.08%), Postives = 47/48 (97.92%), Query Frame = -2


Query: 30  NYSKNMIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           ++ K+M++KEFFTEYGEATQYEI+EVVGKGSYGVVASA++TH+GE+VA
Sbjct: 93  SHRKSMLDKEFFTEYGEATQYEIQEVVGKGSYGVVASAVNTHTGERVA 140

Query: 90   149
           
Sbjct: 153  140

Query: 150  174
           
Sbjct: 213  140

[Close]

BLAST of CU132297 vs. TrEMBL
Match: B9SJ54_RICCO (Mitogen-activated protein kinase OS=Ricinus communis GN=RCOM_0843380 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-13
Identity = 38/43 (88.37%), Postives = 43/43 (100.00%), Query Frame = -2


Query: 30  MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           M+EKEFFTEYGEA+QYEI+EV+GKGSYGVVASAIDTH+GEKVA
Sbjct: 1   MLEKEFFTEYGEASQYEIQEVIGKGSYGVVASAIDTHTGEKVA 43

Query: 90   149
           
Sbjct: 61   43

Query: 150  159
           
Sbjct: 121  43

[Close]

BLAST of CU132297 vs. NCBI nr
Match: gi|778697922|ref|XP_011654439.1| (PREDICTED: mitogen-activated protein kinase 17-like isoform X2 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-14
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = -2


Query: 30  MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA
Sbjct: 1   MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 43

Query: 90   149
           
Sbjct: 61   43

Query: 150  159
           
Sbjct: 121  43

[Close]

BLAST of CU132297 vs. NCBI nr
Match: gi|778697913|ref|XP_011654436.1| (PREDICTED: mitogen-activated protein kinase 9-like isoform X1 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-14
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = -2


Query: 30  MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA
Sbjct: 1   MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 43

Query: 90   149
           
Sbjct: 61   43

Query: 150  159
           
Sbjct: 121  43

[Close]

BLAST of CU132297 vs. NCBI nr
Match: gi|659109494|ref|XP_008454747.1| (PREDICTED: mitogen-activated protein kinase 17-like isoform X2 [Cucumis melo])

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-14
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = -2


Query: 30  MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA
Sbjct: 1   MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 43

Query: 90   149
           
Sbjct: 61   43

Query: 150  159
           
Sbjct: 121  43

[Close]

BLAST of CU132297 vs. NCBI nr
Match: gi|659109484|ref|XP_008454742.1| (PREDICTED: mitogen-activated protein kinase 9-like isoform X1 [Cucumis melo])

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-14
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = -2


Query: 30  MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA
Sbjct: 1   MIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 43

Query: 90   149
           
Sbjct: 61   43

Query: 150  159
           
Sbjct: 121  43

[Close]

BLAST of CU132297 vs. NCBI nr
Match: gi|596127143|ref|XP_007222000.1| (hypothetical protein PRUPE_ppa003297mg [Prunus persica])

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-14
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = -2


Query: 30  IIDFNYSKNMIEKEFFTEYGEATQYEIEEVVGKGSYGVVASAIDTHSGEKVA 89
           +    + KNM++KEFFTEYGEA+QYEI+EV+GKGSYGVVASA+DTH+GEKVA
Sbjct: 72  LASMGHHKNMLDKEFFTEYGEASQYEIQEVIGKGSYGVVASAVDTHTGEKVA 123

Query: 90   149
           
Sbjct: 132  123

Query: 150  186
           
Sbjct: 192  123

The following BLAST results are available for this feature:

BLAST of CU132297 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MPK9_ARATH	3.5e-14	76.60	Mitogen-activated protein kinase 9 OS=Arabidopsis thaliana GN=MPK9 PE=2 SV=2	[more]
MPK12_ORYSJ	7.8e-14	68.75	Mitogen-activated protein kinase 12 OS=Oryza sativa subsp. japonica GN=MPK12 PE=...	[more]
MPK13_ORYSJ	1.5e-12	82.05	Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. japonica GN=MPK13 PE=...	[more]
MPK13_ORYSI	1.5e-12	82.05	Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. indica GN=MPK13 PE=2 ...	[more]
MPK8_ARATH	2.5e-12	78.05	Mitogen-activated protein kinase 8 OS=Arabidopsis thaliana GN=MPK8 PE=1 SV=2	[more]

BLAST of CU132297 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMF1_CUCSA	4.9e-15	100.00	Mitogen-activated protein kinase OS=Cucumis sativus GN=Csa_5G002030 PE=4 SV=1	[more]
M5XB79_PRUPE	1.4e-14	73.08	Mitogen-activated protein kinase OS=Prunus persica GN=PRUPE_ppa003297mg PE=4 SV=...	[more]
W9QY19_9ROSA	9.2e-14	74.07	Mitogen-activated protein kinase OS=Morus notabilis GN=L484_015619 PE=4 SV=1	[more]
D7T8T1_VITVI	1.2e-13	77.08	Mitogen-activated protein kinase OS=Vitis vinifera GN=VIT_01s0011g04920 PE=4 SV=...	[more]
B9SJ54_RICCO	1.6e-13	88.37	Mitogen-activated protein kinase OS=Ricinus communis GN=RCOM_0843380 PE=4 SV=1	[more]

BLAST of CU132297 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778697922\|ref\|XP_011654439.1\|	1.2e-14	100.00	PREDICTED: mitogen-activated protein kinase 17-like isoform X2 [Cucumis sativus]	[more]
gi\|778697913\|ref\|XP_011654436.1\|	1.2e-14	100.00	PREDICTED: mitogen-activated protein kinase 9-like isoform X1 [Cucumis sativus]	[more]
gi\|659109494\|ref\|XP_008454747.1\|	1.2e-14	100.00	PREDICTED: mitogen-activated protein kinase 17-like isoform X2 [Cucumis melo]	[more]
gi\|659109484\|ref\|XP_008454742.1\|	1.2e-14	100.00	PREDICTED: mitogen-activated protein kinase 9-like isoform X1 [Cucumis melo]	[more]
gi\|596127143\|ref\|XP_007222000.1\|	3.5e-14	73.08	hypothetical protein PRUPE_ppa003297mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa5G002030	Csa5G002030	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02O2TIP	FKNP3UI02O2TIP	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011009	Protein kinase-like domain	unknown	SSF56112	Protein kinase-like (PK-like)	coord: 15..71 score: 1.7
None	No IPR available	GENE3D	G3DSA:3.30.200.20		coord: 40..71 score: 1.
None	No IPR available	PANTHER	PTHR24055	MITOGEN-ACTIVATED PROTEIN KINASE	coord: 12..71 score: 1.3
None	No IPR available	PANTHER	PTHR24055:SF200	MITOGEN-ACTIVATED PROTEIN KINASE 18-RELATED	coord: 12..71 score: 1.3