CU131774 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU131774
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Potassium transporter
Location	Chr1 : 6314197 .. 6315263 (-)
Sequence length	227

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GTTTTTCCTTGCCTCCTCTTGGCATATTCTGGACAGGCTGCCTACCTTATGAACAATACGGATCATGTGGTTGATGCCTTCTATCGTTCAATCCCAGAATCCATATACTGGCCCGTGTTTGTTGTTGCAACTGCTGCTGCTGTAGTTGCTAGCCAAGCCACTATATCTGCAACATTTTCAATTATCAAGCAGGCTCTTGCTCATGGCTGTTTTCCAAGAGTTTAAAG

Library


Library category	ESTs
fruit (8DPP) library	1

Homology

[Close]

BLAST of CU131774 vs. Swiss-Prot
Match: HAK12_ORYSJ (Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 5.8e-19
Identity = 45/74 (60.81%), Postives = 50/74 (67.57%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAY+GQAAY+++N DHVVDAFYRSIP++IYWP                    +S
Sbjct: 326 VFPCLLLAYTGQAAYIISNKDHVVDAFYRSIPDTIYWPVFIIATLAAIVASQATISATYS 385

Query: 61  IIKQALAHGCFPRV 120
           IIKQALA GCFPRV
Sbjct: 386 IIKQALALGCFPRV 399

Query: 121  180
           
Sbjct: 446  399

Query: 181  223
           
Sbjct: 506  399

[Close]

BLAST of CU131774 vs. Swiss-Prot
Match: POT11_ARATH (Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.3e-18
Identity = 44/74 (59.46%), Postives = 46/74 (62.16%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAY+    DHV DAFYRSIP S+YWP                    FS
Sbjct: 336 VFPCLLLAYSGQAAYIRRYPDHVADAFYRSIPGSVYWPMFIIATAAAIVASQATISATFS 395

Query: 61  IIKQALAHGCFPRV 120
           ++KQALAHGCFPRV
Sbjct: 396 LVKQALAHGCFPRV 409

Query: 121  180
           
Sbjct: 456  409

Query: 181  223
           
Sbjct: 516  409

[Close]

BLAST of CU131774 vs. Swiss-Prot
Match: HAK11_ORYSJ (Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 SV=4)

HSP 1 Score: 90.9 bits (224), Expect = 6.4e-18
Identity = 44/74 (59.46%), Postives = 48/74 (64.86%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAY+GQAAY++ + DHV DAFYRSIP+SIYWP                    +S
Sbjct: 326 VFPCLLLAYTGQAAYIIAHKDHVADAFYRSIPDSIYWPAFVIATAAAIVASQATISATYS 385

Query: 61  IIKQALAHGCFPRV 120
           IIKQALA GCFPRV
Sbjct: 386 IIKQALALGCFPRV 399

Query: 121  180
           
Sbjct: 446  399

Query: 181  223
           
Sbjct: 506  399

[Close]

BLAST of CU131774 vs. Swiss-Prot
Match: POT10_ARATH (Potassium transporter 10 OS=Arabidopsis thaliana GN=POT10 PE=2 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 3.2e-17
Identity = 43/74 (58.11%), Postives = 45/74 (60.81%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYL     HV DAFY+SIP+ +YWP                    FS
Sbjct: 335 VFPCLLLAYSGQAAYLRKYPHHVEDAFYQSIPKRVYWPMFIIATAAAIVASQATISATFS 394

Query: 61  IIKQALAHGCFPRV 120
           +IKQALAHGCFPRV
Sbjct: 395 LIKQALAHGCFPRV 408

Query: 121  180
           
Sbjct: 455  408

Query: 181  223
           
Sbjct: 515  408

[Close]

BLAST of CU131774 vs. Swiss-Prot
Match: POT9_ARATH (Potassium transporter 9 OS=Arabidopsis thaliana GN=POT9 PE=2 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-16
Identity = 40/74 (54.05%), Postives = 46/74 (62.16%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAY GQAAYL+ + +H  DAFY SIP+S+YWP                    +S
Sbjct: 336 VFPCLLLAYCGQAAYLVIHKEHYQDAFYASIPDSVYWPMFIVATGAAIVGSQATISGTYS 395

Query: 61  IIKQALAHGCFPRV 120
           I+KQA+AHGCFPRV
Sbjct: 396 IVKQAVAHGCFPRV 409

Query: 121  180
           
Sbjct: 456  409

Query: 181  223
           
Sbjct: 516  409

[Close]

BLAST of CU131774 vs. TrEMBL
Match: K4B5D1_SOLLC (Potassium transporter OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-19
Identity = 52/74 (70.27%), Postives = 52/74 (70.27%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYLM NTDHVVDAFYRSIPESIYWP                    FS
Sbjct: 325 VFPCLLLAYSGQAAYLMQNTDHVVDAFYRSIPESIYWPVFVIATLAAIVASQATISATFS 384

Query: 61  IIKQALAHGCFPRV 120
           IIKQALA GCFPRV
Sbjct: 385 IIKQALALGCFPRV 398

Query: 121  180
           
Sbjct: 445  398

Query: 181  223
           
Sbjct: 505  398

[Close]

BLAST of CU131774 vs. TrEMBL
Match: A0A061E3N7_THECC (Potassium transporter OS=Theobroma cacao GN=TCM_006029 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-19
Identity = 50/74 (67.57%), Postives = 52/74 (70.27%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYLM + DHVVDAFYRSIP+SIYWP                    FS
Sbjct: 331 VFPCLLLAYSGQAAYLMTHRDHVVDAFYRSIPDSIYWPVFVIATAAAIVASQATISATFS 390

Query: 61  IIKQALAHGCFPRV 120
           IIKQALAHGCFPRV
Sbjct: 391 IIKQALAHGCFPRV 404

Query: 121  180
           
Sbjct: 451  404

Query: 181  223
           
Sbjct: 511  404

[Close]

BLAST of CU131774 vs. TrEMBL
Match: M1BIK3_SOLTU (Potassium transporter OS=Solanum tuberosum GN=PGSC0003DMG400017862 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.1e-19
Identity = 51/74 (68.92%), Postives = 51/74 (68.92%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYLM NTDHV DAFYRSIPESIYWP                    FS
Sbjct: 325 VFPCLLLAYSGQAAYLMQNTDHVADAFYRSIPESIYWPVFVIATLAAIVASQATISATFS 384

Query: 61  IIKQALAHGCFPRV 120
           IIKQALA GCFPRV
Sbjct: 385 IIKQALALGCFPRV 398

Query: 121  180
           
Sbjct: 445  398

Query: 181  223
           
Sbjct: 505  398

[Close]

BLAST of CU131774 vs. TrEMBL
Match: M1BIK1_SOLTU (Potassium transporter OS=Solanum tuberosum GN=PGSC0003DMG400017862 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.1e-19
Identity = 51/74 (68.92%), Postives = 51/74 (68.92%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYLM NTDHV DAFYRSIPESIYWP                    FS
Sbjct: 262 VFPCLLLAYSGQAAYLMQNTDHVADAFYRSIPESIYWPVFVIATLAAIVASQATISATFS 321

Query: 61  IIKQALAHGCFPRV 120
           IIKQALA GCFPRV
Sbjct: 322 IIKQALALGCFPRV 335

Query: 121  180
           
Sbjct: 382  335

Query: 181  223
           
Sbjct: 442  335

[Close]

BLAST of CU131774 vs. TrEMBL
Match: M1BIK2_SOLTU (Potassium transporter OS=Solanum tuberosum GN=PGSC0003DMG400017862 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.1e-19
Identity = 51/74 (68.92%), Postives = 51/74 (68.92%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYLM NTDHV DAFYRSIPESIYWP                    FS
Sbjct: 142 VFPCLLLAYSGQAAYLMQNTDHVADAFYRSIPESIYWPVFVIATLAAIVASQATISATFS 201

Query: 61  IIKQALAHGCFPRV 120
           IIKQALA GCFPRV
Sbjct: 202 IIKQALALGCFPRV 215

Query: 121  180
           
Sbjct: 262  215

Query: 181  223
           
Sbjct: 322  215

[Close]

BLAST of CU131774 vs. NCBI nr
Match: gi|778658295|ref|XP_011652452.1| (PREDICTED: potassium transporter 10-like [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 4.3e-22
Identity = 54/74 (72.97%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWP                    FS
Sbjct: 328 VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPVFVVATAAAVVASQATISATFS 387

Query: 61  IIKQALAHGCFPRV 120
           IIKQALAHGCFPRV
Sbjct: 388 IIKQALAHGCFPRV 401

Query: 121  180
           
Sbjct: 448  401

Query: 181  223
           
Sbjct: 508  401

[Close]

BLAST of CU131774 vs. NCBI nr
Match: gi|659067648|ref|XP_008440560.1| (PREDICTED: potassium transporter 11-like [Cucumis melo])

HSP 1 Score: 112.1 bits (279), Expect = 4.3e-22
Identity = 54/74 (72.97%), Postives = 54/74 (72.97%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWP                    FS
Sbjct: 328 VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPVFVVATAAAVVASQATISATFS 387

Query: 61  IIKQALAHGCFPRV 120
           IIKQALAHGCFPRV
Sbjct: 388 IIKQALAHGCFPRV 401

Query: 121  180
           
Sbjct: 448  401

Query: 181  223
           
Sbjct: 508  401

[Close]

BLAST of CU131774 vs. NCBI nr
Match: gi|970010006|ref|XP_015065902.1| (PREDICTED: potassium transporter 11 [Solanum pennellii])

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-20
Identity = 52/74 (70.27%), Postives = 52/74 (70.27%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYLM NTDHVVDAFYRSIPESIYWP                    FS
Sbjct: 325 VFPCLLLAYSGQAAYLMQNTDHVVDAFYRSIPESIYWPVFVIATLAAIVASQATISATFS 384

Query: 61  IIKQALAHGCFPRV 120
           IIKQALA GCFPRV
Sbjct: 385 IIKQALALGCFPRV 398

Query: 121  180
           
Sbjct: 445  398

Query: 181  223
           
Sbjct: 505  398

[Close]

BLAST of CU131774 vs. NCBI nr
Match: gi|460371520|ref|XP_004231584.1| (PREDICTED: potassium transporter 11-like [Solanum lycopersicum])

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-20
Identity = 52/74 (70.27%), Postives = 52/74 (70.27%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYLM NTDHVVDAFYRSIPESIYWP                    FS
Sbjct: 325 VFPCLLLAYSGQAAYLMQNTDHVVDAFYRSIPESIYWPVFVIATLAAIVASQATISATFS 384

Query: 61  IIKQALAHGCFPRV 120
           IIKQALA GCFPRV
Sbjct: 385 IIKQALALGCFPRV 398

Query: 121  180
           
Sbjct: 445  398

Query: 181  223
           
Sbjct: 505  398

[Close]

BLAST of CU131774 vs. NCBI nr
Match: gi|590681263|ref|XP_007041056.1| (K+ uptake permease 11 isoform 1 [Theobroma cacao])

HSP 1 Score: 104.4 bits (259), Expect = 9.0e-20
Identity = 50/74 (67.57%), Postives = 52/74 (70.27%), Query Frame = 1


Query: 1   VFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPXXXXXXXXXXXXXXXXXXXXFS 60
           VFPCLLLAYSGQAAYLM + DHVVDAFYRSIP+SIYWP                    FS
Sbjct: 331 VFPCLLLAYSGQAAYLMTHRDHVVDAFYRSIPDSIYWPVFVIATAAAIVASQATISATFS 390

Query: 61  IIKQALAHGCFPRV 120
           IIKQALAHGCFPRV
Sbjct: 391 IIKQALAHGCFPRV 404

Query: 121  180
           
Sbjct: 451  404

Query: 181  223
           
Sbjct: 511  404

The following BLAST results are available for this feature:

BLAST of CU131774 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HAK12_ORYSJ	5.8e-19	60.81	Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 PE=2 ...	[more]
POT11_ARATH	1.3e-18	59.46	Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=2 SV=1	[more]
HAK11_ORYSJ	6.4e-18	59.46	Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 ...	[more]
POT10_ARATH	3.2e-17	58.11	Potassium transporter 10 OS=Arabidopsis thaliana GN=POT10 PE=2 SV=2	[more]
POT9_ARATH	1.6e-16	54.05	Potassium transporter 9 OS=Arabidopsis thaliana GN=POT9 PE=2 SV=2	[more]

BLAST of CU131774 vs. TrEMBL


Match Name	E-value	Identity	Description
K4B5D1_SOLLC	1.4e-19	70.27	Potassium transporter OS=Solanum lycopersicum PE=3 SV=1	[more]
A0A061E3N7_THECC	3.1e-19	67.57	Potassium transporter OS=Theobroma cacao GN=TCM_006029 PE=3 SV=1	[more]
M1BIK3_SOLTU	4.1e-19	68.92	Potassium transporter OS=Solanum tuberosum GN=PGSC0003DMG400017862 PE=3 SV=1	[more]
M1BIK1_SOLTU	4.1e-19	68.92	Potassium transporter OS=Solanum tuberosum GN=PGSC0003DMG400017862 PE=3 SV=1	[more]
M1BIK2_SOLTU	4.1e-19	68.92	Potassium transporter OS=Solanum tuberosum GN=PGSC0003DMG400017862 PE=3 SV=1	[more]

BLAST of CU131774 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778658295\|ref\|XP_011652452.1\|	4.3e-22	72.97	PREDICTED: potassium transporter 10-like [Cucumis sativus]	[more]
gi\|659067648\|ref\|XP_008440560.1\|	4.3e-22	72.97	PREDICTED: potassium transporter 11-like [Cucumis melo]	[more]
gi\|970010006\|ref\|XP_015065902.1\|	4.0e-20	70.27	PREDICTED: potassium transporter 11 [Solanum pennellii]	[more]
gi\|460371520\|ref\|XP_004231584.1\|	4.0e-20	70.27	PREDICTED: potassium transporter 11-like [Solanum lycopersicum]	[more]
gi\|590681263\|ref\|XP_007041056.1\|	9.0e-20	67.57	K+ uptake permease 11 isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR003855	K+_transporter

Vocabulary: **Molecular Function**
Term	Definition
GO:0015079	potassium ion transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0071805	potassium ion transmembrane transport

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071805	potassium ion transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0015079	potassium ion transmembrane transporter activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G057060	Csa1G057060	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02NUX69	FKNP3UI02NUX69	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003855	Potassium transporter	PFAM	PF02705	K_trans	coord: 1..74 score: 2.8
None	No IPR available	PANTHER	PTHR30540	OSMOTIC STRESS POTASSIUM TRANSPORTER	coord: 1..71 score: 5.4
None	No IPR available	PANTHER	PTHR30540:SF11	POTASSIUM TRANSPORTER 10-RELATED	coord: 1..71 score: 5.4