CU129145 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU129145
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	MFS general substrate transporter
Location	Chr4 : 6402376 .. 6402598 (-)
Sequence length	222

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GGAGGTGGAGGCCAAATGAATACAGCAGTTGCTGATAACGCTTCCACCGCCCTCTACACCACTTTTGCAATATTCAGCATCATCGGCGGCGGCGTATACAACATCCTTGGCCCTCGTCTCACCCTCTTCGCCGGCTGCATCACTTACGTTCTCTACGCTGGCTCCTTCCTCTATTACAATCACTTCAAGGACCAAACCTTCGCTATCATTGCAGGAGCAATT

Library


Library category	ESTs
fruit (8DPP) library	1

Homology

[Close]

BLAST of CU129145 vs. Swiss-Prot
Match: UN931_ARATH (UNC93-like protein 1 OS=Arabidopsis thaliana GN=At1g18000 PE=2 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 7.0e-25
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQ++   A+NA+TA+YT F +F ++GGG YN+LGPRLTL AGC TYVLYAGSFLYYN
Sbjct: 57  GGGGQVDPTAANNANTAVYTAFTVFGLLGGGFYNVLGPRLTLAAGCSTYVLYAGSFLYYN 116

Query: 61  HFKDQTFAIIAGAI 120
           H   Q FAI+AGA+
Sbjct: 117 HHHHQAFAIVAGAL 130

Query: 121  180
           
Sbjct: 177  130

Query: 181  223
           
Sbjct: 237  130

[Close]

BLAST of CU129145 vs. Swiss-Prot
Match: UN932_ARATH (UNC93-like protein 2 OS=Arabidopsis thaliana GN=At1g18010 PE=2 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 7.0e-25
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQ++   A+NA+TA+YT F +F ++GGG YN+LGPRLTL AGC TYVLYAGSFLYYN
Sbjct: 57  GGGGQVDPTAANNANTAVYTAFTVFGLLGGGFYNVLGPRLTLAAGCSTYVLYAGSFLYYN 116

Query: 61  HFKDQTFAIIAGAI 120
           H   Q FAI+AGA+
Sbjct: 117 HHHHQAFAIVAGAL 130

Query: 121  180
           
Sbjct: 177  130

Query: 181  223
           
Sbjct: 237  130

[Close]

BLAST of CU129145 vs. Swiss-Prot
Match: YLX5_SCHPO (UNC93-like protein C922.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC922.05c PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-09
Identity = 30/72 (41.67%), Postives = 41/72 (56.94%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGG++N  VA++A+ ALY+TFA      G + N++G +LTL  G   Y +Y  S L Y 
Sbjct: 84  GGGGEVNADVANDANVALYSTFAGLGFFAGSICNLIGVKLTLAIGGTGYSVYTASLLCYK 143

Query: 61  HFKDQTFAIIAG 120
           H  ++ F I  G
Sbjct: 144 HVYNRGFVIFGG 155

Query: 121  180
           
Sbjct: 204  155

Query: 181  217
           
Sbjct: 264  155

[Close]

BLAST of CU129145 vs. TrEMBL
Match: A0A0A0L0K7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097680 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.8e-34
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQMNTAVADNASTALYTTFAIF IIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN
Sbjct: 50  GGGGQMNTAVADNASTALYTTFAIFGIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 109

Query: 61  HFKDQTFAIIAGAI 120
           HFKDQTFAIIAGAI
Sbjct: 110 HFKDQTFAIIAGAI 123

Query: 121  180
           
Sbjct: 170  123

Query: 181  223
           
Sbjct: 230  123

[Close]

BLAST of CU129145 vs. TrEMBL
Match: A0A0A0KVM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097670 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.6e-31
Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQ+++ VADNASTALYTTFAIF IIGGGVYNILGPRLTLFAGC TYVLYAGSFLYYN
Sbjct: 50  GGGGQLDSTVADNASTALYTTFAIFGIIGGGVYNILGPRLTLFAGCSTYVLYAGSFLYYN 109

Query: 61  HFKDQTFAIIAGAI 120
           H+KDQTFAIIAGAI
Sbjct: 110 HYKDQTFAIIAGAI 123

Query: 121  180
           
Sbjct: 170  123

Query: 181  223
           
Sbjct: 230  123

[Close]

BLAST of CU129145 vs. TrEMBL
Match: A0A103Y8M4_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017136 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.6e-28
Identity = 59/74 (79.73%), Postives = 68/74 (91.89%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQ++    +NA+TALYTTFAIF I+GGG+YNILGPRLTLFAGC TY+LYAGSFLYYN
Sbjct: 52  GGGGQVDHTAVNNANTALYTTFAIFGILGGGIYNILGPRLTLFAGCSTYILYAGSFLYYN 111

Query: 61  HFKDQTFAIIAGAI 120
           H+KDQTFAI+AGAI
Sbjct: 112 HYKDQTFAIVAGAI 125

Query: 121  180
           
Sbjct: 172  125

Query: 181  223
           
Sbjct: 232  125

[Close]

BLAST of CU129145 vs. TrEMBL
Match: A0A067LFI2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14920 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.5e-26
Identity = 58/74 (78.38%), Postives = 66/74 (89.19%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQ++   A+NA+TALYTTFA+F I+GGG+YNILGPRLTL AGC TYVLYAGSFLYYN
Sbjct: 49  GGGGQVDQTAANNANTALYTTFAVFGILGGGIYNILGPRLTLAAGCSTYVLYAGSFLYYN 108

Query: 61  HFKDQTFAIIAGAI 120
           H K QTFAI+AGAI
Sbjct: 109 HHKHQTFAIVAGAI 122

Query: 121  180
           
Sbjct: 169  122

Query: 181  223
           
Sbjct: 229  122

[Close]

BLAST of CU129145 vs. TrEMBL
Match: K7KLR7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G226100 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.0e-26
Identity = 57/74 (77.03%), Postives = 66/74 (89.19%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQ+N+  ++NA TALYTTFAIF I+GGG+YNILGP LTLFAGC TYVLYAGSFLYYN
Sbjct: 53  GGGGQVNSTASNNALTALYTTFAIFGIVGGGIYNILGPHLTLFAGCSTYVLYAGSFLYYN 112

Query: 61  HFKDQTFAIIAGAI 120
           H++ Q FAI+AGAI
Sbjct: 113 HYQHQFFAIVAGAI 126

Query: 121  180
           
Sbjct: 173  126

Query: 181  223
           
Sbjct: 233  126

[Close]

BLAST of CU129145 vs. NCBI nr
Match: gi|778691832|ref|XP_011653360.1| (PREDICTED: UNC93-like protein 1 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 9.1e-33
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQMNTAVADNASTALYTTFAIF IIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN
Sbjct: 50  GGGGQMNTAVADNASTALYTTFAIFGIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 109

Query: 61  HFKDQTFAIIAGAI 120
           HFKDQTFAIIAGAI
Sbjct: 110 HFKDQTFAIIAGAI 123

Query: 121  180
           
Sbjct: 170  123

Query: 181  223
           
Sbjct: 230  123

[Close]

BLAST of CU129145 vs. NCBI nr
Match: gi|659111167|ref|XP_008455613.1| (PREDICTED: UNC93-like protein 1 [Cucumis melo])

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-30
Identity = 68/74 (91.89%), Postives = 70/74 (94.59%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQM+T VADNASTALYTTFAIF IIGGG+YNILGPRLTLFAGC TYVLYAGSFLYYN
Sbjct: 50  GGGGQMDTTVADNASTALYTTFAIFGIIGGGIYNILGPRLTLFAGCATYVLYAGSFLYYN 109

Query: 61  HFKDQTFAIIAGAI 120
           H KDQTFAIIAGAI
Sbjct: 110 HIKDQTFAIIAGAI 123

Query: 121  180
           
Sbjct: 170  123

Query: 181  223
           
Sbjct: 230  123

[Close]

BLAST of CU129145 vs. NCBI nr
Match: gi|778691829|ref|XP_011653359.1| (PREDICTED: UNC93-like protein 1 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 7.2e-30
Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQ+++ VADNASTALYTTFAIF IIGGGVYNILGPRLTLFAGC TYVLYAGSFLYYN
Sbjct: 50  GGGGQLDSTVADNASTALYTTFAIFGIIGGGVYNILGPRLTLFAGCSTYVLYAGSFLYYN 109

Query: 61  HFKDQTFAIIAGAI 120
           H+KDQTFAIIAGAI
Sbjct: 110 HYKDQTFAIIAGAI 123

Query: 121  180
           
Sbjct: 170  123

Query: 181  223
           
Sbjct: 230  123

[Close]

BLAST of CU129145 vs. NCBI nr
Match: gi|659111165|ref|XP_008455612.1| (PREDICTED: UNC93-like protein 1 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-28
Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQ+++ VADNA TALYTTFAIF IIGGGVYNILGPR TLFAGC TYVLYAGSFLYYN
Sbjct: 50  GGGGQLDSTVADNALTALYTTFAIFGIIGGGVYNILGPRFTLFAGCSTYVLYAGSFLYYN 109

Query: 61  HFKDQTFAIIAGAI 120
           H+KDQTFAIIAGAI
Sbjct: 110 HYKDQTFAIIAGAI 123

Query: 121  180
           
Sbjct: 170  123

Query: 181  223
           
Sbjct: 230  123

[Close]

BLAST of CU129145 vs. NCBI nr
Match: gi|976919702|gb|KVI04544.1| (hypothetical protein Ccrd_017136 [Cynara cardunculus var. scolymus])

HSP 1 Score: 128.3 bits (321), Expect = 5.7e-27
Identity = 59/74 (79.73%), Postives = 68/74 (91.89%), Query Frame = 1


Query: 1   GGGGQMNTAVADNASTALYTTFAIFSIIGGGVYNILGPRLTLFAGCITYVLYAGSFLYYN 60
           GGGGQ++    +NA+TALYTTFAIF I+GGG+YNILGPRLTLFAGC TY+LYAGSFLYYN
Sbjct: 52  GGGGQVDHTAVNNANTALYTTFAIFGILGGGIYNILGPRLTLFAGCSTYILYAGSFLYYN 111

Query: 61  HFKDQTFAIIAGAI 120
           H+KDQTFAI+AGAI
Sbjct: 112 HYKDQTFAIVAGAI 125

Query: 121  180
           
Sbjct: 172  125

Query: 181  223
           
Sbjct: 232  125

The following BLAST results are available for this feature:

BLAST of CU129145 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UN931_ARATH	7.0e-25	67.57	UNC93-like protein 1 OS=Arabidopsis thaliana GN=At1g18000 PE=2 SV=2	[more]
UN932_ARATH	7.0e-25	67.57	UNC93-like protein 2 OS=Arabidopsis thaliana GN=At1g18010 PE=2 SV=2	[more]
YLX5_SCHPO	1.1e-09	41.67	UNC93-like protein C922.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]

BLAST of CU129145 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0K7_CUCSA	5.8e-34	98.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097680 PE=4 SV=1	[more]
A0A0A0KVM5_CUCSA	4.6e-31	90.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097670 PE=4 SV=1	[more]
A0A103Y8M4_CYNCS	3.6e-28	79.73	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017136 PE=4 ...	[more]
A0A067LFI2_JATCU	1.5e-26	78.38	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14920 PE=4 SV=1	[more]
K7KLR7_SOYBN	2.0e-26	77.03	Uncharacterized protein OS=Glycine max GN=GLYMA_04G226100 PE=4 SV=1	[more]

BLAST of CU129145 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691832\|ref\|XP_011653360.1\|	9.1e-33	98.65	PREDICTED: UNC93-like protein 1 [Cucumis sativus]	[more]
gi\|659111167\|ref\|XP_008455613.1\|	2.5e-30	91.89	PREDICTED: UNC93-like protein 1 [Cucumis melo]	[more]
gi\|778691829\|ref\|XP_011653359.1\|	7.2e-30	90.54	PREDICTED: UNC93-like protein 1 [Cucumis sativus]	[more]
gi\|659111165\|ref\|XP_008455612.1\|	1.0e-28	87.84	PREDICTED: UNC93-like protein 1 [Cucumis melo]	[more]
gi\|976919702\|gb\|KVI04544.1\|	5.7e-27	79.73	hypothetical protein Ccrd_017136 [Cynara cardunculus var. scolymus]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR010291	Ion_channel_UNC-93

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa4G097680	Csa4G097680	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02MTAZU	FKNP3UI02MTAZU	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010291	Ion channel regulatory protein, UNC-93	PFAM	PF05978	UNC-93	coord: 17..63 score: 1.
None	No IPR available	PANTHER	PTHR23294	ET TRANSLATION PRODUCT-RELATED	coord: 1..74 score: 6.2
None	No IPR available	PANTHER	PTHR23294:SF25	UNC93-LIKE PROTEIN 1-RELATED	coord: 1..74 score: 6.2