CU128331 (transcribed_cluster) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
ATGATTGCAGGTTGCTTGTGCACTGGTTATGGCAGGTGAAGATCTTGAGAATCATATTGCAGTTAAGGACATTCTTGTTCAGATGGGTGTTTATTTTCAAGTTCAGGTATATTACCTTCACTTGAATGGTTGATTAATGATTCTGATTTTCTCTAGATTTCTTAGGGTTGAGGTCGCATTCACATTATCTGAACTACACTTAGTTTTTTTAAGAAATGTTTGTTTAAGCCGATGTTTGATTC
BLAST of CU128331 vs. Swiss-Prot
Match: FPPS1_ARATH (Farnesyl pyrophosphate synthase 1, mitochondrial OS=Arabidopsis thaliana GN=FPS1 PE=2 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 2.2e-08 Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 2
BLAST of CU128331 vs. Swiss-Prot
Match: FPPS_HELAN (Farnesyl pyrophosphate synthase OS=Helianthus annuus GN=FPS1 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 6.4e-08 Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 2
BLAST of CU128331 vs. Swiss-Prot
Match: FPPS2_ARATH (Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana GN=FPS2 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-07 Identity = 27/38 (71.05%), Postives = 29/38 (76.32%), Query Frame = 2
BLAST of CU128331 vs. Swiss-Prot
Match: FPPS2_PARAR (Farnesyl pyrophosphate synthase 2 OS=Parthenium argentatum GN=FPS2 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-07 Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 2
BLAST of CU128331 vs. Swiss-Prot
Match: FPPS1_LUPAL (Farnesyl pyrophosphate synthase 1 OS=Lupinus albus GN=FPS1 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.9e-07 Identity = 28/42 (66.67%), Postives = 30/42 (71.43%), Query Frame = 2
BLAST of CU128331 vs. TrEMBL
Match: A0A0A0K801_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G017060 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.1e-09 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 2
BLAST of CU128331 vs. TrEMBL
Match: A0A140GWW1_MANES (Farnesyl pyrophosphate synthase 1 OS=Manihot esculenta GN=FPS1 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.5e-08 Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 2
BLAST of CU128331 vs. TrEMBL
Match: M5VZY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008174mg PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.7e-08 Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 2
BLAST of CU128331 vs. TrEMBL
Match: A0A0G3BFY6_PAELC (Farnesyl pyrophosphate synthase OS=Paeonia lactiflora GN=FPPS PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-07 Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 2
BLAST of CU128331 vs. TrEMBL
Match: Q8L7F4_HEVBR (Farnesyl diphosphate synthase OS=Hevea brasiliensis GN=FDP PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.8e-07 Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 2
BLAST of CU128331 vs. NCBI nr
Match: gi|449441191|ref|XP_004138366.1| (PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis sativus]) HSP 1 Score: 68.9 bits (167), Expect = 4.5e-09 Identity = 36/42 (85.71%), Postives = 36/42 (85.71%), Query Frame = 2
BLAST of CU128331 vs. NCBI nr
Match: gi|700190686|gb|KGN45890.1| (hypothetical protein Csa_6G017060 [Cucumis sativus]) HSP 1 Score: 68.6 bits (166), Expect = 5.8e-09 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 2
BLAST of CU128331 vs. NCBI nr
Match: gi|659126192|ref|XP_008463060.1| (PREDICTED: farnesyl pyrophosphate synthase 1 [Cucumis melo]) HSP 1 Score: 64.7 bits (156), Expect = 8.4e-08 Identity = 34/42 (80.95%), Postives = 34/42 (80.95%), Query Frame = 2
BLAST of CU128331 vs. NCBI nr
Match: gi|1002794045|gb|AMN82833.1| (farnesyl pyrophosphate synthase 1 [Manihot esculenta]) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-07 Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 2
BLAST of CU128331 vs. NCBI nr
Match: gi|826137337|gb|AKJ26301.1| (farnesyl pyrophosphate synthase [Paeonia lactiflora]) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-07 Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 2
The following BLAST results are available for this feature:
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
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