CU127766 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU127766
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionDUF3820 family protein
LocationChr7 : 17991617 .. 17991892 (-)
Sequence length284
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGGATATAGTTCGTGCGTCTAGTCGAGGTTTAAAAATGGTTGTTGTTTTTGCCGGTTCCACGAGTCTGTGTTTGCCGGGAAATGCTTTAGCGGCGGCATGCGTGCGGAGAAGACGAAGCCAGGGAATTACTATAAGAAGCGAGGCAGAAGGGAAAAATCCGATTCCAGGTAGAGACCGGGTGATAGGGTTTGGAAAACACAAGGGCAAAATGCTTGGAACCCTTCCTTCAACCTATCTGAAATGGATCTCCAAAAACCTTCGAGCAAGAGAGTTCG
Library categoryESTs
fruit (8DPP) library1
BLAST of CU127766 vs. TrEMBL
Match: A0A0A0K7H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447750 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.7e-43
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 2

Query: 11  DIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPIPGRDRV 70
           DIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNP+PGRDRV
Sbjct: 4   DIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRV 63

Query: 71  IGFGKHKGKMLGTLPSTYLKWISKNLRAREF 130
           IGFGKHKGKMLGTLPSTYLKWISKNLRAREF
Sbjct: 64  IGFGKHKGKMLGTLPSTYLKWISKNLRAREF 94

Query: 131 190
           
Sbjct: 124 94

Query: 191 250
           
Sbjct: 184 94

Query: 251 284
           
Sbjct: 244 94

BLAST of CU127766 vs. TrEMBL
Match: A0A059AJ13_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03180 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.1e-11
Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 2

Query: 110 VRRRRSQGI----TIRSEAEGKNPIPGRDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAR 169
           +RRRRS G+    T R+   G    P RDRV+ FG+HKGKMLGTLPS YL+W+S NLRAR
Sbjct: 25  LRRRRSPGLLRSPTTRTALPGSGATPARDRVMDFGRHKGKMLGTLPSGYLRWVSNNLRAR 84

Query: 170 E 229
           +
Sbjct: 85  D 85

Query: 230 281
           
Sbjct: 145 85

BLAST of CU127766 vs. TrEMBL
Match: A0A068TT13_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026614001 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.3e-10
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 2

Query: 161 KNPIPGRDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREF 220
           +N IP RDRVI FGK+KGKM+G+LPS YLKW+SKNLRAR+F
Sbjct: 30  RNAIPARDRVIDFGKYKGKMVGSLPSNYLKWVSKNLRARDF 70

Query: 221 280
           
Sbjct: 90  70

Query: 281 284
           
Sbjct: 150 70

BLAST of CU127766 vs. TrEMBL
Match: A0A0V0HB17_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-09
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 2

Query: 170 IPGRDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREF 229
           IP RDRVI FGK+KGKMLGTLPS YLKW++KNLRAR+F
Sbjct: 16  IPARDRVIDFGKYKGKMLGTLPSKYLKWVTKNLRARDF 53

Query: 230 284
           
Sbjct: 76  53

BLAST of CU127766 vs. TrEMBL
Match: M1BK02_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018255 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-09
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 2

Query: 170 IPGRDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREF 229
           IP RDRVI FGK+KGKMLGTLPS YLKW++KNLRAR+F
Sbjct: 53  IPARDRVIDFGKYKGKMLGTLPSKYLKWVTKNLRARDF 90

Query: 230 284
           
Sbjct: 113 90

BLAST of CU127766 vs. NCBI nr
Match: gi|700190180|gb|KGN45413.1| (hypothetical protein Csa_7G447750 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 3.3e-43
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 2

Query: 11  DIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPIPGRDRV 70
           DIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNP+PGRDRV
Sbjct: 4   DIVRASSRGLKMVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRV 63

Query: 71  IGFGKHKGKMLGTLPSTYLKWISKNLRAREF 130
           IGFGKHKGKMLGTLPSTYLKWISKNLRAREF
Sbjct: 64  IGFGKHKGKMLGTLPSTYLKWISKNLRAREF 94

Query: 131 190
           
Sbjct: 124 94

Query: 191 250
           
Sbjct: 184 94

Query: 251 284
           
Sbjct: 244 94

BLAST of CU127766 vs. NCBI nr
Match: gi|778729445|ref|XP_004141831.2| (PREDICTED: uncharacterized protein LOC101215921 [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 2.7e-37
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 2

Query: 44  MVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPIPGRDRVIGFGKHKGKML 103
           MVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNP+PGRDRVIGFGKHKGKML
Sbjct: 1   MVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKML 60

Query: 104 GTLPSTYLKWISKNLRAREF 163
           GTLPSTYLKWISKNLRAREF
Sbjct: 61  GTLPSTYLKWISKNLRAREF 80

Query: 164 223
           
Sbjct: 121 80

Query: 224 283
           
Sbjct: 181 80

BLAST of CU127766 vs. NCBI nr
Match: gi|659124514|ref|XP_008462203.1| (PREDICTED: uncharacterized protein LOC103500617 [Cucumis melo])

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-33
Identity = 74/80 (92.50%), Postives = 76/80 (95.00%), Query Frame = 2

Query: 44  MVVVFAGSTSLCLPGNALAAACVRRRRSQGITIRSEAEGKNPIPGRDRVIGFGKHKGKML 103
           MV VFAGSTSLCLPGNA AAACV RRRS+G TIRSEAEG+NPIPGRDRVIGFGKHKGKML
Sbjct: 1   MVGVFAGSTSLCLPGNASAAACVWRRRSRGNTIRSEAEGQNPIPGRDRVIGFGKHKGKML 60

Query: 104 GTLPSTYLKWISKNLRAREF 163
           GTLPSTYLKWISKNLRAREF
Sbjct: 61  GTLPSTYLKWISKNLRAREF 80

Query: 164 223
           
Sbjct: 121 80

Query: 224 283
           
Sbjct: 181 80

BLAST of CU127766 vs. NCBI nr
Match: gi|470140146|ref|XP_004305804.1| (PREDICTED: uncharacterized protein LOC101304796 [Fragaria vesca subsp. vesca])

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-11
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = 2

Query: 167 PIPGRDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREF 226
           PIP RDRVI FGKHKGKMLGTLPSTYLKW+S NLRAR+F
Sbjct: 58  PIPARDRVIDFGKHKGKMLGTLPSTYLKWVSTNLRARDF 96

Query: 227 284
           
Sbjct: 118 96

BLAST of CU127766 vs. NCBI nr
Match: gi|697154817|ref|XP_009631645.1| (PREDICTED: uncharacterized protein LOC104121375 [Nicotiana tomentosiformis])

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-11
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 2

Query: 83  PGNALAAACVRRRRSQGITIRSEAEGKNPIPGRDRVIGFGKHKGKMLGTLPSTYLKWISK 142
           P ++ + +  R   S  I+  S A G   IP RDRVI FGK+KGKMLGTLPS YLKW+SK
Sbjct: 63  PPSSQSLSLRRNISSFTISAGSRATGPRQIPARDRVIDFGKYKGKMLGTLPSKYLKWVSK 122

Query: 143 NLRAREF 202
           NLRAR+F
Sbjct: 123 NLRARDF 129

Query: 203 262
           
Sbjct: 183 129

Query: 263 284
           
Sbjct: 243 129

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K7H6_CUCSA1.7e-4398.90Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447750 PE=4 SV=1[more]
A0A059AJ13_EUCGR5.1e-1159.02Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03180 PE=4 SV=1[more]
A0A068TT13_COFCA4.3e-1075.61Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026614001 PE=4 SV=1[more]
A0A0V0HB17_SOLCH1.3e-0981.58Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1[more]
M1BK02_SOLTU1.3e-0981.58Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018255 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700190180|gb|KGN45413.1|3.3e-4398.90hypothetical protein Csa_7G447750 [Cucumis sativus][more]
gi|778729445|ref|XP_004141831.2|2.7e-3798.75PREDICTED: uncharacterized protein LOC101215921 [Cucumis sativus][more]
gi|659124514|ref|XP_008462203.1|3.1e-3392.50PREDICTED: uncharacterized protein LOC103500617 [Cucumis melo][more]
gi|470140146|ref|XP_004305804.1|1.1e-1187.18PREDICTED: uncharacterized protein LOC101304796 [Fragaria vesca subsp. vesca][more]
gi|697154817|ref|XP_009631645.1|1.5e-1158.21PREDICTED: uncharacterized protein LOC104121375 [Nicotiana tomentosiformis][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR024530QSregVF_b

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G447750Csa7G447750gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02MA1AKFKNP3UI02MA1AKEST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024530Putative quorum-sensing-regulated virulence factorPFAMPF12843QSregVF_bcoord: 65..88
score: 6.
NoneNo IPR availablePANTHERPTHR38357FAMILY NOT NAMEDcoord: 58..95
score: 3.2
NoneNo IPR availablePANTHERPTHR38357:SF1SUBFAMILY NOT NAMEDcoord: 58..95
score: 3.2