CU127655 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU127655
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionBZIP transcription factor
LocationChr7 : 11300517 .. 11300776 (-)
Sequence length260
The following sequences are available for this feature:

transcribed_cluster sequence

TTCGCCCTAAGCCCGAGCCGATTGCCTCTGGACCTTTTGGTGGTCACTTACGGAGCTTGTCTATGGACTCTGATTTCTTCAAGAATTTGGACCTTGGTGGTGATAGTGGGGAAATCGATTCTTTGGGGAAGAAGACTCCGGTGAGTGAACAAACGGCCAGTTCGTCATCGACATAGCTTATCCATGGATGGTTCTTCGTCGTCGTTTGAGGCTGATTCAACCCTAGTAATTGATGGAGTGAAGAAGGCGATGGACCCGGA
Library categoryESTs
fruit (8DPP) library1
BLAST of CU127655 vs. TrEMBL
Match: A0A0A0K9Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G324150 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-20
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3

Query: 3   RPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPVSEQ 62
           RPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPVSEQ
Sbjct: 91  RPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPVSEQ 140

Query: 63  122
           
Sbjct: 151 140

Query: 123 153
           
Sbjct: 211 140

BLAST of CU127655 vs. TrEMBL
Match: A0A0A0K9Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G324150 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-10
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 1

Query: 127 GRRLR*VNKRPVRHRHSLSMDGSSSSFEADSTLVIDGVKKAMDP 186
           G++     +RPVRHRHSLSMDGSSSSFEADSTLVIDGVKKAMDP
Sbjct: 132 GKKTPVSEQRPVRHRHSLSMDGSSSSFEADSTLVIDGVKKAMDP 175

Query: 187 246
           
Sbjct: 192 175

Query: 247 259
           
Sbjct: 252 175

BLAST of CU127655 vs. NCBI nr
Match: gi|449443774|ref|XP_004139652.1| (PREDICTED: transcription factor VIP1-like [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 4.6e-20
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3

Query: 3   RPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPVSEQ 62
           RPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPVSEQ
Sbjct: 91  RPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPVSEQ 140

Query: 63  122
           
Sbjct: 151 140

Query: 123 153
           
Sbjct: 211 140

BLAST of CU127655 vs. NCBI nr
Match: gi|659123141|ref|XP_008461512.1| (PREDICTED: transcription factor VIP1 [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-19
Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 3

Query: 3   RPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPVSEQ 62
           RPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGD+GEIDSLGKKTPVSEQ
Sbjct: 91  RPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDTGEIDSLGKKTPVSEQ 140

Query: 63  122
           
Sbjct: 151 140

Query: 123 153
           
Sbjct: 211 140

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K9Q8_CUCSA2.5e-20100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G324150 PE=4 SV=1[more]
A0A0A0K9Q8_CUCSA1.4e-1081.82Uncharacterized protein OS=Cucumis sativus GN=Csa_7G324150 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449443774|ref|XP_004139652.1|4.6e-20100.00PREDICTED: transcription factor VIP1-like [Cucumis sativus][more]
gi|659123141|ref|XP_008461512.1|1.0e-1998.00PREDICTED: transcription factor VIP1 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G324150Csa7G324150gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02M8L8VFKNP3UI02M8L8VEST