CU127306 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU127306
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionAnkyrin repeat family protein
LocationChr6 : 16430491 .. 16430731 (+)
Sequence length249
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGAACACACAACAAATAAAGAATGGCAACCTTAGAAAACAAGCTTCAAGAAGCAGCAATGTCAGGCAACCTAGAAAAGATAATAGAACTGCTTCAACAATCCCTTCGTCTTATCGATACAGTCGGACCCGATAATCCACCGCCTCACGATTTCGCCAATTTCCCTGACCGGATTCTTCAACAGAAGCCTCACCTGACTCGAGTGTTGGACTCAAAGGGATCATGCCCCCTTCACTTAGCAG
Library categoryESTs
fruit (8DPP) library1
BLAST of CU127306 vs. TrEMBL
Match: A0A0A0KFJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363550 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 8.3e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 3

Query: 30  MATLENKLQEAAMSGNLEKIIELLQQSLRLIDTVGPDNPPPHDFANFPDRILQQKPHLTR 89
           MATLENKLQEAAMSGNLEKIIELLQQSLRLIDTVGPDNPPPHDFANFPDRILQQKPHLTR
Sbjct: 1   MATLENKLQEAAMSGNLEKIIELLQQSLRLIDTVGPDNPPPHDFANFPDRILQQKPHLTR 60

Query: 90  VLDSKGSCPLHLA 149
           VLDSKGSCPLHLA
Sbjct: 61  VLDSKGSCPLHLA 73

Query: 150 209
           
Sbjct: 121 73

Query: 210 249
           
Sbjct: 181 73

BLAST of CU127306 vs. NCBI nr
Match: gi|449453051|ref|XP_004144272.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 4.1e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 3

Query: 30  MATLENKLQEAAMSGNLEKIIELLQQSLRLIDTVGPDNPPPHDFANFPDRILQQKPHLTR 89
           MATLENKLQEAAMSGNLEKIIELLQQSLRLIDTVGPDNPPPHDFANFPDRILQQKPHLTR
Sbjct: 1   MATLENKLQEAAMSGNLEKIIELLQQSLRLIDTVGPDNPPPHDFANFPDRILQQKPHLTR 60

Query: 90  VLDSKGSCPLHLA 149
           VLDSKGSCPLHLA
Sbjct: 61  VLDSKGSCPLHLA 73

Query: 150 209
           
Sbjct: 121 73

Query: 210 249
           
Sbjct: 181 73

BLAST of CU127306 vs. NCBI nr
Match: gi|659089461|ref|XP_008445520.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo])

HSP 1 Score: 137.9 bits (346), Expect = 8.0e-30
Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 3

Query: 30  MATLENKLQEAAMSGNLEKIIELLQQSLRLIDTVGPDNPPPHDFANFPDRILQQKPHLTR 89
           MATLENKLQEAAM GN+EKI+ELLQQSLRL++TV PDNPPPHDFA FPDRILQQKPHLTR
Sbjct: 1   MATLENKLQEAAMLGNVEKILELLQQSLRLLETVVPDNPPPHDFAKFPDRILQQKPHLTR 60

Query: 90  VLDSKGSCPLHLA 149
           VL+SKGSCPLHLA
Sbjct: 61  VLNSKGSCPLHLA 73

Query: 150 209
           
Sbjct: 121 73

Query: 210 249
           
Sbjct: 181 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KFJ7_CUCSA8.3e-34100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363550 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449453051|ref|XP_004144272.1|4.1e-34100.00PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis sativus][more]
gi|659089461|ref|XP_008445520.1|8.0e-3089.04PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G363550Csa6G363550gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02M42RAFKNP3UI02M42RAEST