CU126310 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU126310
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 16887916 .. 16895930 (-)
Sequence length196
The following sequences are available for this feature:

transcribed_cluster sequence

TTGATTTTGGCTTCTCCAAGCAAACATGTACTAAATATATGTCGATGCTGAACATTATCCTTTCAGATGGAAGTACAAGTACAACGTCGAAATTATTAAAGCGAACTATATGTAAGAAAGATCAATTGATACTAGACAATGTCAATACACTTTCAGTTTCAGATGGAAGTCGAACGTCAACACCAGAGTTGAAGTT
Library categoryESTs
fruit (8DPP) library1
BLAST of CU126310 vs. TrEMBL
Match: A0A0A0L3P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G454150 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 7.0e-20
Identity = 58/83 (69.88%), Postives = 58/83 (69.88%), Query Frame = 3

Query: 3   DFGFSKQTCTKYMSMLNIILSDGXXXXXXKLLK-------------------RTICKKDQ 62
           DFGFSKQTCTKYMSMLNIILSDG      KLLK                   RTICKKDQ
Sbjct: 43  DFGFSKQTCTKYMSMLNIILSDGSTSTTSKLLKQICNRDSMLSDGRPTLQLNRTICKKDQ 102

Query: 63  LILDNVNTLSVSDGSRTSTPELK 122
           LILDNVNTLSVSDGSRTSTPELK
Sbjct: 103 LILDNVNTLSVSDGSRTSTPELK 125

Query: 123 182
           
Sbjct: 163 125

Query: 183 195
           
Sbjct: 223 125

BLAST of CU126310 vs. NCBI nr
Match: gi|778694842|ref|XP_011653877.1| (PREDICTED: serine/threonine-protein kinase SRK2G-like isoform X1 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-19
Identity = 58/83 (69.88%), Postives = 58/83 (69.88%), Query Frame = 3

Query: 3   DFGFSKQTCTKYMSMLNIILSDGXXXXXXKLLK-------------------RTICKKDQ 62
           DFGFSKQTCTKYMSMLNIILSDG      KLLK                   RTICKKDQ
Sbjct: 282 DFGFSKQTCTKYMSMLNIILSDGSTSTTSKLLKQICNRDSMLSDGRPTLQLNRTICKKDQ 341

Query: 63  LILDNVNTLSVSDGSRTSTPELK 122
           LILDNVNTLSVSDGSRTSTPELK
Sbjct: 342 LILDNVNTLSVSDGSRTSTPELK 364

Query: 123 182
           
Sbjct: 402 364

Query: 183 195
           
Sbjct: 462 364

BLAST of CU126310 vs. NCBI nr
Match: gi|700199598|gb|KGN54756.1| (hypothetical protein Csa_4G454150 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-19
Identity = 58/83 (69.88%), Postives = 58/83 (69.88%), Query Frame = 3

Query: 3   DFGFSKQTCTKYMSMLNIILSDGXXXXXXKLLK-------------------RTICKKDQ 62
           DFGFSKQTCTKYMSMLNIILSDG      KLLK                   RTICKKDQ
Sbjct: 43  DFGFSKQTCTKYMSMLNIILSDGSTSTTSKLLKQICNRDSMLSDGRPTLQLNRTICKKDQ 102

Query: 63  LILDNVNTLSVSDGSRTSTPELK 122
           LILDNVNTLSVSDGSRTSTPELK
Sbjct: 103 LILDNVNTLSVSDGSRTSTPELK 125

Query: 123 182
           
Sbjct: 163 125

Query: 183 195
           
Sbjct: 223 125

BLAST of CU126310 vs. NCBI nr
Match: gi|778694846|ref|XP_011653878.1| (PREDICTED: CBL-interacting serine/threonine-protein kinase 17-like isoform X2 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-19
Identity = 58/83 (69.88%), Postives = 58/83 (69.88%), Query Frame = 3

Query: 3   DFGFSKQTCTKYMSMLNIILSDGXXXXXXKLLK-------------------RTICKKDQ 62
           DFGFSKQTCTKYMSMLNIILSDG      KLLK                   RTICKKDQ
Sbjct: 173 DFGFSKQTCTKYMSMLNIILSDGSTSTTSKLLKQICNRDSMLSDGRPTLQLNRTICKKDQ 232

Query: 63  LILDNVNTLSVSDGSRTSTPELK 122
           LILDNVNTLSVSDGSRTSTPELK
Sbjct: 233 LILDNVNTLSVSDGSRTSTPELK 255

Query: 123 182
           
Sbjct: 293 255

Query: 183 195
           
Sbjct: 353 255

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L3P0_CUCSA7.0e-2069.88Uncharacterized protein OS=Cucumis sativus GN=Csa_4G454150 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778694842|ref|XP_011653877.1|1.0e-1969.88PREDICTED: serine/threonine-protein kinase SRK2G-like isoform X1 [Cucumis sativu... [more]
gi|700199598|gb|KGN54756.1|1.0e-1969.88hypothetical protein Csa_4G454150 [Cucumis sativus][more]
gi|778694846|ref|XP_011653878.1|1.0e-1969.88PREDICTED: CBL-interacting serine/threonine-protein kinase 17-like isoform X2 [C... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G454150Csa4G454150gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LPGRTFKNP3UI02LPGRTEST