CU126192 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU126192
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMyelin-associated oligodendrocyte basic protein isoform 1
LocationChr1 : 27895543 .. 27895741 (-)
Sequence length205
The following sequences are available for this feature:

transcribed_cluster sequence

CCCCGGCCGAAAGGGAGGAGTTCAACGACTTCCATTTCGAATTCTTCTTCGGTGGAATTGGTTAATGGAGATAAACCCAAAAGTCCAATGGAGTAATTGGGAATTCGATTATTAATGCCCTCAAGGCGTTGCAGAAACCTGCAATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGGACGATCCCAATTCTGCGTTGGCCGCTTC
Library categoryESTs
fruit (8DPP) library1
BLAST of CU126192 vs. TrEMBL
Match: A0A0A0M3K0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695410 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.6e-09
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 3

Query: 93  VIGNSIINALKALQKPAIAAVLLGLLLMDDPNSALAA 152
           VIGNSIINALKALQKPAIAAVLLGLLLM DPNSALAA
Sbjct: 93  VIGNSIINALKALQKPAIAAVLLGLLLMYDPNSALAA 129

Query: 153 204
           
Sbjct: 153 129

BLAST of CU126192 vs. TrEMBL
Match: A0A0A0M3K0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695410 PE=4 SV=1)

HSP 1 Score: 36.2 bits (82), Expect = 1.9e+01
Identity = 18/31 (58.06%), Postives = 19/31 (61.29%), Query Frame = 1

Query: 10  KGRXXXXXXXXXXXVELVNGDKPKSPME*LG 69
           KGR           VELVNGDKPKSPME +G
Sbjct: 65  KGRSSTTSISNSSSVELVNGDKPKSPMEVIG 95

Query: 70  103
           
Sbjct: 125 95


HSP 2 Score: 57.4 bits (137), Expect = 7.8e-06
Identity = 28/37 (75.68%), Postives = 34/37 (91.89%), Query Frame = 3

Query: 93  VIGNSIINALKALQKPAIAAVLLGLLLMDDPNSALAA 152
           +I + ++NALKAL+KPA+AAVLLGLLLM DPNSALAA
Sbjct: 141 LIASKLLNALKALRKPAMAAVLLGLLLMSDPNSALAA 177

Query: 153 204
           
Sbjct: 201 177

BLAST of CU126192 vs. NCBI nr
Match: gi|449449537|ref|XP_004142521.1| (PREDICTED: uncharacterized protein LOC101210275 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 3.2e-08
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 3

Query: 93  VIGNSIINALKALQKPAIAAVLLGLLLMDDPNSALAA 152
           VIGNSIINALKALQKPAIAAVLLGLLLM DPNSALAA
Sbjct: 93  VIGNSIINALKALQKPAIAAVLLGLLLMYDPNSALAA 129

Query: 153 204
           
Sbjct: 153 129

BLAST of CU126192 vs. NCBI nr
Match: gi|700211710|gb|KGN66806.1| (hypothetical protein Csa_1G695410 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 3.2e-08
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 3

Query: 93  VIGNSIINALKALQKPAIAAVLLGLLLMDDPNSALAA 152
           VIGNSIINALKALQKPAIAAVLLGLLLM DPNSALAA
Sbjct: 93  VIGNSIINALKALQKPAIAAVLLGLLLMYDPNSALAA 129

Query: 153 204
           
Sbjct: 153 129

BLAST of CU126192 vs. NCBI nr
Match: gi|659131254|ref|XP_008465590.1| (PREDICTED: uncharacterized protein LOC103503226 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-07
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 3

Query: 93  VIGNSIINALKALQKPAIAAVLLGLLLMDDPNSALAA 152
           VIGNSIINALK L+KPAIAAVLLGLLLM DPNSALAA
Sbjct: 93  VIGNSIINALKTLRKPAIAAVLLGLLLMYDPNSALAA 129

Query: 153 204
           
Sbjct: 153 129

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0M3K0_CUCSA7.6e-0997.30Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695410 PE=4 SV=1[more]
A0A0A0M3K0_CUCSA1.9e+0158.06Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695410 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449449537|ref|XP_004142521.1|3.2e-0897.30PREDICTED: uncharacterized protein LOC101210275 [Cucumis sativus][more]
gi|700211710|gb|KGN66806.1|3.2e-0897.30hypothetical protein Csa_1G695410 [Cucumis sativus][more]
gi|659131254|ref|XP_008465590.1|2.7e-0791.89PREDICTED: uncharacterized protein LOC103503226 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G695410Csa1G695410gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LNNYQFKNP3UI02LNNYQEST