CU126074 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU126074
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 32487530 .. 32496487 (-)
Sequence length168
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGAGGTTTCAAAGTTCTCACAATTCCTTTTGTCCTTTTCGAATTTCAATCGTATGGGGAATTGGAGAAGACGATACGGCTCTGAAATTCCTCATCATCAGCTACTCAAATCCCCCAGAAACCCCTCTCCAGATAATTGGCACGCTGGTGCGCCGTCGTGGG
Library categoryESTs
fruit (8DPP) library1
BLAST of CU126074 vs. TrEMBL
Match: A0A0A0LC07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824170 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.9e-15
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 3

Query: 60  MGNWRRRYGSEIPHHQLLKSPRNPSPDNWHAGAPSW 119
           MGNWRRRYGSEIPHHQLLKSPRNPSPDNWHAG PSW
Sbjct: 1   MGNWRRRYGSEIPHHQLLKSPRNPSPDNWHAGVPSW 36

Query: 120 168
           
Sbjct: 61  36

BLAST of CU126074 vs. NCBI nr
Match: gi|449437803|ref|XP_004136680.1| (PREDICTED: uncharacterized protein LOC101209753 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-14
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 3

Query: 60  MGNWRRRYGSEIPHHQLLKSPRNPSPDNWHAGAPSW 119
           MGNWRRRYGSEIPHHQLLKSPRNPSPDNWHAG PSW
Sbjct: 1   MGNWRRRYGSEIPHHQLLKSPRNPSPDNWHAGVPSW 36

Query: 120 168
           
Sbjct: 61  36

BLAST of CU126074 vs. NCBI nr
Match: gi|659085315|ref|XP_008443354.1| (PREDICTED: uncharacterized protein DDB_G0287625 isoform X1 [Cucumis melo])

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-12
Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 3

Query: 60  MGNWRRRYGSEIPHHQLLKSPRNPSPDNWHAGAPSW 119
           MGNWRRR+GSEIPHH  LKSPRNPSPDNWHAG PSW
Sbjct: 1   MGNWRRRHGSEIPHHHQLKSPRNPSPDNWHAGVPSW 36

Query: 120 168
           
Sbjct: 61  36

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LC07_CUCSA9.9e-1597.22Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824170 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449437803|ref|XP_004136680.1|1.9e-1497.22PREDICTED: uncharacterized protein LOC101209753 [Cucumis sativus][more]
gi|659085315|ref|XP_008443354.1|1.3e-1288.89PREDICTED: uncharacterized protein DDB_G0287625 isoform X1 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G824200Csa3G824200gene
Csa3G824180Csa3G824180gene
Csa3G824190Csa3G824190gene
Csa3G824170Csa3G824170gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LLYAQFKNP3UI02LLYAQEST