CU125744 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU125744
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionDNAJ heat shock N-terminal domain-containing family protein
LocationChr7 : 9913032 .. 9917779 (-)
Sequence length224
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TTAAGAGGGATGCGTGAGGCTGCAAAATGGAGAAAATCACAAGGAATATCTATGGAGGGTGATGAAGAACTCCTTGCCAACATGGATGATGAAGTTACAGCAGAACCCAAAAGAGATGAATGGATGACCAGCCTACCTCCTGAAAGAAAGCCTGGCATGACTATGCAGTCTTCTAGATTCAGCAAGAGCTCCAAGGAAAGTCGTGGTGATACAAGTGTTTGACT
Library
Library categoryESTs
fruit (8DPP) library1
Homology
[Close]
BLAST of CU125744 vs. TrEMBL
Match: A0A0A0K9B3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G280860 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-25
Identity = 60/73 (82.19%), Postives = 61/73 (83.56%), Query Frame = 1 

Query: 1   LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTSLPPERKPGMTMQXXXX 60
           LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMT+LPPERKPGMTMQ    
Sbjct: 28  LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTNLPPERKPGMTMQSSRF 87

Query: 61  XXXXXXXXGDTSV 120
                   GDTSV
Sbjct: 88  SKSSKESRGDTSV 100

Query: 121  180
           
Sbjct: 148  100

Query: 181  220
           
Sbjct: 208  100

[Close]
BLAST of CU125744 vs. TrEMBL
Match: A5AXU1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0072g01080 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-17
Identity = 49/73 (67.12%), Postives = 54/73 (73.97%), Query Frame = 1 

Query: 1   LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTSLPPERKPGMTMQXXXX 60
           L+ MREAA WR+ QGISMEGD+ELLA+M  EV  EPKRDEWMT+LPPERKPGMTMQ    
Sbjct: 371 LKAMREAAHWRRLQGISMEGDDELLADM--EVKVEPKRDEWMTTLPPERKPGMTMQSTKF 430

Query: 61  XXXXXXXXGDTSV 120
                   GDTSV
Sbjct: 431 SRSSKEGRGDTSV 441

Query: 121  180
           
Sbjct: 491  441

Query: 181  220
           
Sbjct: 551  441

[Close]
BLAST of CU125744 vs. TrEMBL
Match: A0A0D2SDV1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G140400 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.4e-17
Identity = 48/73 (65.75%), Postives = 54/73 (73.97%), Query Frame = 1 

Query: 1   LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTSLPPERKPGMTMQXXXX 60
           LR MREAA+WR+ QGISMEGD+ELLA +  EV A PKRDEWMT+LPPERKPG+TMQ    
Sbjct: 385 LRAMREAAQWRRLQGISMEGDDELLAEV--EVKAPPKRDEWMTTLPPERKPGVTMQSTKF 444

Query: 61  XXXXXXXXGDTSV 120
                   GDTSV
Sbjct: 445 SKSTKEGRGDTSV 455

Query: 121  180
           
Sbjct: 505  455

Query: 181  220
           
Sbjct: 565  455

[Close]
BLAST of CU125744 vs. TrEMBL
Match: A0A0D2VF33_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G140400 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.4e-17
Identity = 48/73 (65.75%), Postives = 54/73 (73.97%), Query Frame = 1 

Query: 1   LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTSLPPERKPGMTMQXXXX 60
           LR MREAA+WR+ QGISMEGD+ELLA +  EV A PKRDEWMT+LPPERKPG+TMQ    
Sbjct: 143 LRAMREAAQWRRLQGISMEGDDELLAEV--EVKAPPKRDEWMTTLPPERKPGVTMQSTKF 202

Query: 61  XXXXXXXXGDTSV 120
                   GDTSV
Sbjct: 203 SKSTKEGRGDTSV 213

Query: 121  180
           
Sbjct: 263  213

Query: 181  220
           
Sbjct: 323  213

[Close]
BLAST of CU125744 vs. TrEMBL
Match: A0A0D2VDJ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G140400 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.4e-17
Identity = 48/73 (65.75%), Postives = 54/73 (73.97%), Query Frame = 1 

Query: 1   LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTSLPPERKPGMTMQXXXX 60
           LR MREAA+WR+ QGISMEGD+ELLA +  EV A PKRDEWMT+LPPERKPG+TMQ    
Sbjct: 258 LRAMREAAQWRRLQGISMEGDDELLAEV--EVKAPPKRDEWMTTLPPERKPGVTMQSTKF 317

Query: 61  XXXXXXXXGDTSV 120
                   GDTSV
Sbjct: 318 SKSTKEGRGDTSV 328

Query: 121  180
           
Sbjct: 378  328

Query: 181  220
           
Sbjct: 438  328

[Close]
BLAST of CU125744 vs. NCBI nr
Match: gi|449465354|ref|XP_004150393.1| (PREDICTED: uncharacterized protein LOC101213388 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-24
Identity = 60/73 (82.19%), Postives = 61/73 (83.56%), Query Frame = 1 

Query: 1   LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTSLPPERKPGMTMQXXXX 60
           LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMT+LPPERKPGMTMQ    
Sbjct: 398 LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTNLPPERKPGMTMQSSRF 457

Query: 61  XXXXXXXXGDTSV 120
                   GDTSV
Sbjct: 458 SKSSKESRGDTSV 470

Query: 121  180
           
Sbjct: 518  470

Query: 181  220
           
Sbjct: 578  470

[Close]
BLAST of CU125744 vs. NCBI nr
Match: gi|700189173|gb|KGN44406.1| (hypothetical protein Csa_7G280860 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-24
Identity = 60/73 (82.19%), Postives = 61/73 (83.56%), Query Frame = 1 

Query: 1   LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTSLPPERKPGMTMQXXXX 60
           LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMT+LPPERKPGMTMQ    
Sbjct: 28  LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTNLPPERKPGMTMQSSRF 87

Query: 61  XXXXXXXXGDTSV 120
                   GDTSV
Sbjct: 88  SKSSKESRGDTSV 100

Query: 121  180
           
Sbjct: 148  100

Query: 181  220
           
Sbjct: 208  100

[Close]
BLAST of CU125744 vs. NCBI nr
Match: gi|659124015|ref|XP_008461948.1| (PREDICTED: microtubule-associated protein futsch [Cucumis melo])

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-24
Identity = 59/73 (80.82%), Postives = 61/73 (83.56%), Query Frame = 1 

Query: 1   LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTSLPPERKPGMTMQXXXX 60
           LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMT+LPPERKPGMTMQ    
Sbjct: 452 LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTTLPPERKPGMTMQSSRF 511

Query: 61  XXXXXXXXGDTSV 120
                   GDTS+
Sbjct: 512 SKSSKEGRGDTSI 524

Query: 121  180
           
Sbjct: 572  524

Query: 181  220
           
Sbjct: 632  524

[Close]
BLAST of CU125744 vs. NCBI nr
Match: gi|225460732|ref|XP_002267868.1| (PREDICTED: uncharacterized protein LOC100255442 [Vitis vinifera])

HSP 1 Score: 95.1 bits (235), Expect = 5.4e-17
Identity = 49/73 (67.12%), Postives = 54/73 (73.97%), Query Frame = 1 

Query: 1   LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTSLPPERKPGMTMQXXXX 60
           L+ MREAA WR+ QGISMEGD+ELLA+M  EV  EPKRDEWMT+LPPERKPGMTMQ    
Sbjct: 371 LKAMREAAHWRRLQGISMEGDDELLADM--EVKVEPKRDEWMTTLPPERKPGMTMQSTKF 430

Query: 61  XXXXXXXXGDTSV 120
                   GDTSV
Sbjct: 431 SRSSKEGRGDTSV 441

Query: 121  180
           
Sbjct: 491  441

Query: 181  220
           
Sbjct: 551  441

[Close]
BLAST of CU125744 vs. NCBI nr
Match: gi|823262886|ref|XP_012464204.1| (PREDICTED: calponin homology domain-containing protein DDB_G0272472 [Gossypium raimondii])

HSP 1 Score: 92.8 bits (229), Expect = 2.7e-16
Identity = 48/73 (65.75%), Postives = 54/73 (73.97%), Query Frame = 1 

Query: 1   LRGMREAAKWRKSQGISMEGDEELLANMDDEVTAEPKRDEWMTSLPPERKPGMTMQXXXX 60
           LR MREAA+WR+ QGISMEGD+ELLA +  EV A PKRDEWMT+LPPERKPG+TMQ    
Sbjct: 385 LRAMREAAQWRRLQGISMEGDDELLAEV--EVKAPPKRDEWMTTLPPERKPGVTMQSTKF 444

Query: 61  XXXXXXXXGDTSV 120
                   GDTSV
Sbjct: 445 SKSTKEGRGDTSV 455

Query: 121  180
           
Sbjct: 505  455

Query: 181  220
           
Sbjct: 565  455

The following BLAST results are available for this feature:
BLAST of CU125744 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9B3_CUCSA2.2e-2582.19Uncharacterized protein OS=Cucumis sativus GN=Csa_7G280860 PE=4 SV=1[more]
A5AXU1_VITVI1.3e-1767.12Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0072g01080 PE=4 SV=... [more]
A0A0D2SDV1_GOSRA6.4e-1765.75Uncharacterized protein OS=Gossypium raimondii GN=B456_013G140400 PE=4 SV=1[more]
A0A0D2VF33_GOSRA6.4e-1765.75Uncharacterized protein OS=Gossypium raimondii GN=B456_013G140400 PE=4 SV=1[more]
A0A0D2VDJ4_GOSRA6.4e-1765.75Uncharacterized protein OS=Gossypium raimondii GN=B456_013G140400 PE=4 SV=1[more]
BLAST of CU125744 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449465354|ref|XP_004150393.1|1.2e-2482.19PREDICTED: uncharacterized protein LOC101213388 [Cucumis sativus][more]
gi|700189173|gb|KGN44406.1|1.2e-2482.19hypothetical protein Csa_7G280860 [Cucumis sativus][more]
gi|659124015|ref|XP_008461948.1|1.6e-2480.82PREDICTED: microtubule-associated protein futsch [Cucumis melo][more]
gi|225460732|ref|XP_002267868.1|5.4e-1767.12PREDICTED: uncharacterized protein LOC100255442 [Vitis vinifera][more]
gi|823262886|ref|XP_012464204.1|2.7e-1665.75PREDICTED: calponin homology domain-containing protein DDB_G0272472 [Gossypium r... [more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G280860Csa7G280860gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LH9U5FKNP3UI02LH9U5EST