CU125708 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU125708
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTransmembrane protein, putative
LocationChr6 : 19539651 .. 19539903 (-)
Sequence length261
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGCTTCTTCTTCTGCACTAGCTTGAACAAAAATACAGAAGTTTGATCCAAACTAATCCAATGGATACGAAGCACAAAGAAATGCAGTTCCTTGGAGCCTTCCGAATCTTCAAAGAAACCTACAAAATTATCAGCAAAAACAAAAAGATATTTGCCATGGCAGCTCTTTGCTTCATCCACCCTCTAAACTTCGTTCTTTCAGGCTTAATGTTGACCTTGAATAACATCCTAAGAAACCTCCACGATTATGGGAAT
Library categoryESTs
fruit (8DPP) library1
BLAST of CU125708 vs. TrEMBL
Match: A0A0A0KJQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421800 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.8e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1

Query: 67  MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 126
           MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL
Sbjct: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60

Query: 127 HDYGN 186
           HDYGN
Sbjct: 61  HDYGN 65

Query: 187 246
           
Sbjct: 121 65

Query: 247 262
           
Sbjct: 181 65

BLAST of CU125708 vs. NCBI nr
Match: gi|700192782|gb|KGN47986.1| (hypothetical protein Csa_6G421800 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1

Query: 67  MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 126
           MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL
Sbjct: 1   MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 60

Query: 127 HDYGN 186
           HDYGN
Sbjct: 61  HDYGN 65

Query: 187 246
           
Sbjct: 121 65

Query: 247 262
           
Sbjct: 181 65

BLAST of CU125708 vs. NCBI nr
Match: gi|659128751|ref|XP_008464353.1| (PREDICTED: uncharacterized protein LOC103502262 [Cucumis melo])

HSP 1 Score: 122.5 bits (306), Expect = 3.7e-25
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 1

Query: 67  MDTKHKEMQFLGAFRIFKETYKIISKNKKIFAMAALCFIHPLNFVLSGLMLTLNNILRNL 126
           MDTKHKEMQFLGAF+IF+ETYKIISKNKKIFAM+ALCFIHPLNF+LSG M TLN ILRNL
Sbjct: 1   MDTKHKEMQFLGAFQIFEETYKIISKNKKIFAMSALCFIHPLNFILSGFMFTLNYILRNL 60

Query: 127 HDYGN 186
           HDYGN
Sbjct: 61  HDYGN 65

Query: 187 246
           
Sbjct: 121 65

Query: 247 262
           
Sbjct: 181 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KJQ4_CUCSA3.8e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700192782|gb|KGN47986.1|2.1e-28100.00hypothetical protein Csa_6G421800 [Cucumis sativus][more]
gi|659128751|ref|XP_008464353.1|3.7e-2589.23PREDICTED: uncharacterized protein LOC103502262 [Cucumis melo][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G421800Csa6G421800gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LGR1KFKNP3UI02LGR1KEST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33133FAMILY NOT NAMEDcoord: 1..62
score: 4.9
NoneNo IPR availablePANTHERPTHR33133:SF5EXPRESSED PROTEINcoord: 1..62
score: 4.9