CU125644 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU125644
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	UDP-Glycosyltransferase superfamily protein
Location	Chr6 : 11788871 .. 11789122 (-)
Sequence length	252

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CACAAACAGCTGCACTGATGAGTATTTCCAGTGGCTGGACTCCCAAACAGAGTGCTCTGTTTTGTACATTTCACAGGGGAGTTTTCTTTCAGTTTCAAGCTCTCAAATGGAGGAGATCGTCGCCGGGGTGAAAGCCAGCGGTGTCCGGTTCTTGTGGGTGGCGCGTGGGAATGACGGCCGGTTGAAGGACGTGGATAGAGAAAATGGGGGTGGTGGTTCGATGGTGCGACCAGTTGAAGGTTCTGTGCCATA

Library


Library category	ESTs
fruit (8DPP) library	1

Homology

[Close]

BLAST of CU125644 vs. Swiss-Prot
Match: U87A1_ARATH (UDP-glycosyltransferase 87A1 OS=Arabidopsis thaliana GN=UGT87A1 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.5e-10
Identity = 30/57 (52.63%), Postives = 36/57 (63.16%), Query Frame = 2


Query: 20  EYFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGRLKD 79
           +YF+WLD Q E SVLYI           QMEEIV GV+ +GV+F WVARG + +LK+
Sbjct: 243 DYFKWLDEQPESSVLYISQGSFLSVSEAQMEEIVVGVREAGVKFFWVARGGELKLKE 299

Query: 80   139
           
Sbjct: 303  299

Query: 140  191
           
Sbjct: 363  299

HSP 2 Score: 35.8 bits (81), Expect = 2.7e-01
Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 3


Query: 204 MGVVVRWCDQLKVLCH 252
           +GVVV WCDQL+VLCH
Sbjct: 305 LGVVVSWCDQLRVLCH 320

[Close]

BLAST of CU125644 vs. Swiss-Prot
Match: U87A2_ARATH (UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana GN=UGT87A2 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-09
Identity = 31/56 (55.36%), Postives = 35/56 (62.50%), Query Frame = 2


Query: 23  YFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGRLKD 82
           Y QWL+ Q E SVLYI           QMEEIV G++ SGVRFLWVARG + +LK+
Sbjct: 259 YIQWLEEQPEGSVLYISQGSFLSVSEAQMEEIVKGLRESGVRFLWVARGGELKLKE 314

Query: 83   142
           
Sbjct: 319  314

Query: 143  191
           
Sbjct: 379  314

HSP 2 Score: 35.8 bits (81), Expect = 2.7e-01
Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 3


Query: 204 MGVVVRWCDQLKVLCH 252
           +GVVV WCDQL+VLCH
Sbjct: 320 LGVVVSWCDQLRVLCH 335

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BLAST of CU125644 vs. TrEMBL
Match: A0A0A0KF85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G181570 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-23
Identity = 57/69 (82.61%), Postives = 57/69 (82.61%), Query Frame = 2


Query: 2   TNSCTDEYFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGR 61
           TNSCTDEYFQWLDSQTECSVLYI           QMEEIVAGVKASGVRFLWVARGNDGR
Sbjct: 250 TNSCTDEYFQWLDSQTECSVLYISQGSFLSVSSSQMEEIVAGVKASGVRFLWVARGNDGR 309

Query: 62  LKDVDRENG 121
           LKDVDRE G
Sbjct: 310 LKDVDREMG 318

Query: 122  181
           
Sbjct: 370  318

Query: 182  209
           
Sbjct: 430  318

[Close]

BLAST of CU125644 vs. TrEMBL
Match: A0A0A0KF85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G181570 PE=4 SV=1)

HSP 1 Score: 40.8 bits (94), Expect = 9.4e-01
Identity = 16/17 (94.12%), Postives = 17/17 (100.00%), Query Frame = 3


Query: 201 KMGVVVRWCDQLKVLCH 252
           +MGVVVRWCDQLKVLCH
Sbjct: 316 EMGVVVRWCDQLKVLCH 332

HSP 2 Score: 88.6 bits (218), Expect = 3.9e-15
Identity = 44/68 (64.71%), Postives = 50/68 (73.53%), Query Frame = 2


Query: 5   NSCTDEYFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGRL 64
           +S +++Y QWLDSQ E SVLYI           QM+EIVAGVKASGVRFLWVARG+D R 
Sbjct: 247 SSASNDYLQWLDSQAEGSVLYISQGSFLSVSNTQMDEIVAGVKASGVRFLWVARGDDDRW 306

Query: 65  KDVDRENG 124
           KDVDRE G
Sbjct: 307 KDVDRETG 314

Query: 125  184
           
Sbjct: 367  314

Query: 185  209
           
Sbjct: 427  314

[Close]

BLAST of CU125644 vs. TrEMBL
Match: A0A0A0KH18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G181560 PE=4 SV=1)

HSP 1 Score: 33.5 bits (75), Expect = 1.5e+02
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3


Query: 207 GVVVRWCDQLKVLCH 252
           G+VV WCDQL+VLCH
Sbjct: 314 GMVVGWCDQLRVLCH 328

HSP 2 Score: 71.2 bits (173), Expect = 6.5e-10
Identity = 36/62 (58.06%), Postives = 40/62 (64.52%), Query Frame = 2


Query: 23  YFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGRLKDVDRE 82
           YFQWLD Q + SVLYI           QMEEI+AG+K SGVRFLWV RG+  R KDV  E
Sbjct: 274 YFQWLDLQPKGSVLYISQGSFLSISNAQMEEIIAGIKESGVRFLWVTRGDTSRFKDVVGE 333

Query: 83  NG 142
            G
Sbjct: 334 VG 335

Query: 143  202
           
Sbjct: 394  335

Query: 203  209
           
Sbjct: 454  335

[Close]

BLAST of CU125644 vs. TrEMBL
Match: A0A0J8BZE0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g175160 PE=4 SV=1)

HSP 1 Score: 34.7 bits (78), Expect = 6.7e+01
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = 3


Query: 168 GMTAG*RTWIEKMGVVVRWCDQLKVLCH 227
           G T+  +  + ++G +V WCDQLKVLCH
Sbjct: 322 GDTSRFKDVVGEVGCLVSWCDQLKVLCH 349

Query: 228  252
           
Sbjct: 382  349

HSP 2 Score: 70.5 bits (171), Expect = 1.1e-09
Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 2


Query: 5   NSCTDE-YFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGR 64
           NS  D+ Y QWLDSQ + SVLYI           QMEEIVAG+K SGVRFLWV RG+  R
Sbjct: 264 NSVIDQSYLQWLDSQPKGSVLYISQGSFLSISTAQMEEIVAGIKESGVRFLWVTRGDTSR 323

Query: 65  LKD 124
            KD
Sbjct: 324 FKD 326

Query: 125  184
           
Sbjct: 384  326

Query: 185  191
           
Sbjct: 444  326

[Close]

BLAST of CU125644 vs. TrEMBL
Match: B9GH66_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s28890g PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.2e-09
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 2


Query: 20  EYFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGRLKDVDR 79
           +Y QWLDSQ + SVLYI           QM+EI+AG++ SGVR+LWVARG   RLKD+  
Sbjct: 260 DYLQWLDSQPKDSVLYISLGSFLSVSSTQMDEIIAGLQDSGVRYLWVARGEASRLKDICS 319

Query: 80  ENGG 139
           ++ G
Sbjct: 320 DDMG 323

Query: 140  199
           
Sbjct: 380  323

Query: 200  212
           
Sbjct: 440  323

[Close]

BLAST of CU125644 vs. NCBI nr
Match: gi|778713759|ref|XP_004143221.2| (PREDICTED: UDP-glycosyltransferase 87A1-like [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-23
Identity = 57/69 (82.61%), Postives = 57/69 (82.61%), Query Frame = 2


Query: 2   TNSCTDEYFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGR 61
           TNSCTDEYFQWLDSQTECSVLYI           QMEEIVAGVKASGVRFLWVARGNDGR
Sbjct: 250 TNSCTDEYFQWLDSQTECSVLYISQGSFLSVSSSQMEEIVAGVKASGVRFLWVARGNDGR 309

Query: 62  LKDVDRENG 121
           LKDVDRE G
Sbjct: 310 LKDVDREMG 318

Query: 122  181
           
Sbjct: 370  318

Query: 182  209
           
Sbjct: 430  318

[Close]

BLAST of CU125644 vs. NCBI nr
Match: gi|659130645|ref|XP_008465275.1| (PREDICTED: UDP-glycosyltransferase 87A1-like [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-19
Identity = 49/68 (72.06%), Postives = 52/68 (76.47%), Query Frame = 2


Query: 5   NSCTDEYFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGRL 64
           N CTDEY QWLDSQT+CSVLYI           QM+EIVAGV+ASGVRFLWVARGND RL
Sbjct: 252 NGCTDEYLQWLDSQTDCSVLYISHGSFLSVSSAQMDEIVAGVEASGVRFLWVARGNDSRL 311

Query: 65  KDVDRENG 124
           K VDRE G
Sbjct: 312 KGVDREMG 319

Query: 125  184
           
Sbjct: 372  319

Query: 185  209
           
Sbjct: 432  319

[Close]

BLAST of CU125644 vs. NCBI nr
Match: gi|449450838|ref|XP_004143169.1| (PREDICTED: UDP-glycosyltransferase 87A1-like [Cucumis sativus])

HSP 1 Score: 89.0 bits (219), Expect = 4.3e-15
Identity = 44/68 (64.71%), Postives = 50/68 (73.53%), Query Frame = 2


Query: 5   NSCTDEYFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGRL 64
           +S +++Y QWLDSQ E SVLYI           QM+EIVAGVKASGVRFLWVARG+D R 
Sbjct: 247 SSASNDYLQWLDSQAEGSVLYISQGSFLSVSNTQMDEIVAGVKASGVRFLWVARGDDDRW 306

Query: 65  KDVDRENG 124
           KDVDRE G
Sbjct: 307 KDVDRETG 314

Query: 125  184
           
Sbjct: 367  314

Query: 185  209
           
Sbjct: 427  314

[Close]

BLAST of CU125644 vs. NCBI nr
Match: gi|659127700|ref|XP_008463842.1| (PREDICTED: UDP-glycosyltransferase 87A1-like [Cucumis melo])

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-14
Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 2


Query: 5   NSCTDEYFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGRL 64
           +S +++Y +WLDSQT+ SVLY+           QM+EI+AGVKASGVRFLWVARG+D R 
Sbjct: 247 SSVSNDYLRWLDSQTDGSVLYVSQGSFLSVSNAQMDEIIAGVKASGVRFLWVARGDDDRW 306

Query: 65  KDVDRENG 124
           KDVDRE G
Sbjct: 307 KDVDRETG 314

Query: 125  184
           
Sbjct: 367  314

Query: 185  209
           
Sbjct: 427  314

[Close]

BLAST of CU125644 vs. NCBI nr
Match: gi|731349246|ref|XP_010685898.1| (PREDICTED: UDP-glycosyltransferase 87A2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 71.6 bits (174), Expect = 7.1e-10
Identity = 36/62 (58.06%), Postives = 40/62 (64.52%), Query Frame = 2


Query: 23  YFQWLDSQTECSVLYIXXXXXXXXXXXQMEEIVAGVKASGVRFLWVARGNDGRLKDVDRE 82
           YFQWLD Q + SVLYI           QMEEI+AG+K SGVRFLWV RG+  R KDV  E
Sbjct: 274 YFQWLDLQPKGSVLYISQGSFLSISNAQMEEIIAGIKESGVRFLWVTRGDTSRFKDVVGE 333

Query: 83  NG 142
            G
Sbjct: 334 VG 335

Query: 143  202
           
Sbjct: 394  335

Query: 203  209
           
Sbjct: 454  335

The following BLAST results are available for this feature:

BLAST of CU125644 vs. Swiss-Prot


Match Name	E-value	Identity	Description
U87A1_ARATH	5.5e-10	52.63	UDP-glycosyltransferase 87A1 OS=Arabidopsis thaliana GN=UGT87A1 PE=2 SV=1	[more]
U87A2_ARATH	1.6e-09	55.36	UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana GN=UGT87A2 PE=1 SV=1	[more]

BLAST of CU125644 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF85_CUCSA	1.3e-23	82.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G181570 PE=4 SV=1	[more]
A0A0A0KF85_CUCSA	9.4e-01	94.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G181570 PE=4 SV=1	[more]
A0A0A0KH18_CUCSA	1.5e+02	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G181560 PE=4 SV=1	[more]
A0A0J8BZE0_BETVU	6.7e+01	50.00	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g175160 PE=4 S...	[more]
B9GH66_POPTR	4.2e-09	51.56	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s28890g PE=4 SV=1	[more]

BLAST of CU125644 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778713759\|ref\|XP_004143221.2\|	1.5e-23	82.61	PREDICTED: UDP-glycosyltransferase 87A1-like [Cucumis sativus]	[more]
gi\|659130645\|ref\|XP_008465275.1\|	3.8e-19	72.06	PREDICTED: UDP-glycosyltransferase 87A1-like [Cucumis melo]	[more]
gi\|449450838\|ref\|XP_004143169.1\|	4.3e-15	64.71	PREDICTED: UDP-glycosyltransferase 87A1-like [Cucumis sativus]	[more]
gi\|659127700\|ref\|XP_008463842.1\|	1.6e-14	60.29	PREDICTED: UDP-glycosyltransferase 87A1-like [Cucumis melo]	[more]
gi\|731349246\|ref\|XP_010685898.1\|	7.1e-10	58.06	PREDICTED: UDP-glycosyltransferase 87A2-like [Beta vulgaris subsp. vulgaris]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR002213	UDP_glucos_trans

Vocabulary: **Molecular Function**
Term	Definition
GO:0016758	transferase activity, transferring hexosyl groups

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G181570	Csa6G181570	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02LG1JL	FKNP3UI02LG1JL	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002213	UDP-glucuronosyl/UDP-glucosyltransferase	PANTHER	PTHR11926	GLUCOSYL/GLUCURONOSYL TRANSFERASES	coord: 7..67 score: 1.5
None	No IPR available	PANTHER	PTHR11926:SF176	UDP-GLYCOSYLTRANSFERASE 87A2	coord: 7..67 score: 1.5
None	No IPR available	unknown	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 6..62 score: 2.87