CU125199 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU125199
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNo hit
LocationChr2 : 17071957 .. 17073096 (-)
Sequence length240
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGACACTGATCAAATCACAAAACACAATATGCCGCCATTCTCTAATCTTTCATCCCTCTCTCTGGCCTATCGATCCTCCCTCGCCCGCATTCACTCTCCAGTCACCGGCGTCTTCCCCATCTTGAAATGTGCTTCTTCTTTTCACCGGCACCACCCGCCAACTGCTTCTGTCCCATTTCAACATGTGCATTATCATTCCGTGTTTCAAGACGAACGCAAAAGGGATGAGTGGA
Library categoryESTs
fruit (8DPP) library1
BLAST of CU125199 vs. NCBI nr
Match: gi|778671200|ref|XP_004152791.2| (PREDICTED: serpin-ZX-like [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 4.5e-22
Identity = 52/68 (76.47%), Postives = 52/68 (76.47%), Query Frame = 3

Query: 36  MPPFXXXXXXXXXXXXXXXXIHSPVTGVFPILKCASSFHRHHPPTASVPFQHVHYHSVFQ 95
           MPPF                IHSPVTGVFPILKCASSFHRHHPPTASVPFQHVHYHSVFQ
Sbjct: 1   MPPFSNLSSLSLAYRSSLARIHSPVTGVFPILKCASSFHRHHPPTASVPFQHVHYHSVFQ 60

Query: 96  DERKRDEW 155
           DERKRDEW
Sbjct: 61  DERKRDEW 68

Query: 156 215
           
Sbjct: 121 68

Query: 216 240
           
Sbjct: 181 68

BLAST of CU125199 vs. NCBI nr
Match: gi|659087829|ref|XP_008444656.1| (PREDICTED: serpin-ZX-like [Cucumis melo])

HSP 1 Score: 79.0 bits (193), Expect = 4.3e-12
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 3

Query: 105 PVTGVFPILKCASSFHRHHPPTASVPFQHVHYHSVFQDER 164
           PVTGVFP+LKCA SFHRH PPTASVPFQHVHYHS+ QD+R
Sbjct: 24  PVTGVFPLLKCAFSFHRHPPPTASVPFQHVHYHSMLQDQR 63

Query: 165 224
           
Sbjct: 84  63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|778671200|ref|XP_004152791.2|4.5e-2276.47PREDICTED: serpin-ZX-like [Cucumis sativus][more]
gi|659087829|ref|XP_008444656.1|4.3e-1285.00PREDICTED: serpin-ZX-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G360690Csa2G360690gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02L9Q1VFKNP3UI02L9Q1VEST