CU124805 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU124805
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 20058754 .. 20059024 (-)
Sequence length281
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGAAAGAAAAAAAGGAGAAAAATCCTGCTAGTTGTGCAGGAAAGCCTCCCCCTTCCGTGATCGGGTTCTTTTGTCGTCGGTAAGCAAGCCGCCGAAGAAAGTTGGGGTGGTTTGCAGCAACCAAAACCCACTCTTCGCACACCCCTAACTCCTTCCTCTCTTTACCAATATTCATTTCAATGCCCCTGCCGGTTTCTTCAGTCTCTACCTACCTACTATGTTATTTTTAACTCTGTAGTGTAGACTTGAAATGGTGGCCATACTCAGCTGATC
Library categoryESTs
fruit (8DPP) library1
BLAST of CU124805 vs. TrEMBL
Match: A0A0A0M182_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G542420 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-11
Identity = 37/49 (75.51%), Postives = 40/49 (81.63%), Query Frame = -3

Query: 49  RGIEMNIGKERKELGVCEEWVLVAANHPNFLRRLAYRRQKNPITEGGGF 108
           RGIEMNIGKERKELGVCEEWVLVAANHPNFLRRLA   ++    +G  F
Sbjct: 72  RGIEMNIGKERKELGVCEEWVLVAANHPNFLRRLASDDKRTRSRKGEAF 120

Query: 109 168
           
Sbjct: 132 120

Query: 169 196
           
Sbjct: 192 120

BLAST of CU124805 vs. TrEMBL
Match: A0A0A0M182_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G542420 PE=4 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 2.8e-01
Identity = 21/33 (63.64%), Postives = 23/33 (69.70%), Query Frame = -1

Query: 39  WLLQTT--PTFFGGLLTDDKRTRSRKGEAFLHN 98
           W+L     P F   L +DDKRTRSRKGEAFLHN
Sbjct: 91  WVLVAANHPNFLRRLASDDKRTRSRKGEAFLHN 123

Query: 99  132
           
Sbjct: 151 123

BLAST of CU124805 vs. NCBI nr
Match: gi|700210855|gb|KGN65951.1| (hypothetical protein Csa_1G542420 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 3.8e-12
Identity = 37/49 (75.51%), Postives = 40/49 (81.63%), Query Frame = -3

Query: 49  RGIEMNIGKERKELGVCEEWVLVAANHPNFLRRLAYRRQKNPITEGGGF 108
           RGIEMNIGKERKELGVCEEWVLVAANHPNFLRRLA   ++    +G  F
Sbjct: 72  RGIEMNIGKERKELGVCEEWVLVAANHPNFLRRLASDDKRTRSRKGEAF 120

Query: 109 168
           
Sbjct: 132 120

Query: 169 196
           
Sbjct: 192 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0M182_CUCSA1.3e-1175.51Uncharacterized protein OS=Cucumis sativus GN=Csa_1G542420 PE=4 SV=1[more]
A0A0A0M182_CUCSA2.8e-0163.64Uncharacterized protein OS=Cucumis sativus GN=Csa_1G542420 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700210855|gb|KGN65951.1|3.8e-1275.51hypothetical protein Csa_1G542420 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G542420Csa1G542420gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02L3Y4XFKNP3UI02L3Y4XEST