CU124163 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU124163
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr1 : 4763701 .. 4764534 (-)
Sequence length	205

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CAAGAGGTGAGTATGCAGTCAAATGCACATTTCTTGAAGAGCAAACCTCTCTCAGCTTCCTTTGCCTCCACATTACGTGCATTTCTACCTGATTAATGGCAGGAGGTAAAGAAGCAAAATCCAGCAAATGTAAGAGCTTTTTAGAAGAGAAATTGCTAACACCAATGGTCTTAGTTAAGCCTAATTCCACACACTTTTCCCCCGG

Library


Library category	ESTs
fruit (8DPP) library	1

Homology

[Close]

BLAST of CU124163 vs. Swiss-Prot
Match: MER_ERYCB (Methylecgonone reductase OS=Erythroxylum coca PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.6e-18
Identity = 39/66 (59.09%), Postives = 52/66 (78.79%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           E+C  LGLTK+IGVSN+ + K+  LL  A++PPA+NQVEM+V W+Q+KLRE CS + +H+
Sbjct: 157 EECSRLGLTKSIGVSNYGTVKISQLLQHATIPPAVNQVEMNVAWQQKKLREFCSKKGIHV 216

Query: 62  TAYSPL 121
           TA+SPL
Sbjct: 217 TAWSPL 222

Query: 122  181
           
Sbjct: 277  222

Query: 182  200
           
Sbjct: 337  222

[Close]

BLAST of CU124163 vs. Swiss-Prot
Match: COR2_PAPSO (Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum GN=COR2 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.6e-18
Identity = 41/66 (62.12%), Postives = 53/66 (80.30%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           EKC  LGLTK+IGVSNFS KKL +L+  A++PPA+NQVEM+ +W+Q+KLR+ C + N+ +
Sbjct: 151 EKCQMLGLTKSIGVSNFSCKKLHYLMATANIPPAVNQVEMNPIWQQQKLRDYCKTNNIMV 210

Query: 62  TAYSPL 121
           TAYSPL
Sbjct: 211 TAYSPL 216

Query: 122  181
           
Sbjct: 271  216

Query: 182  200
           
Sbjct: 331  216

[Close]

BLAST of CU124163 vs. Swiss-Prot
Match: AKRC9_ARATH (Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.1e-16
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           E   + G  + IGVSNFS+KKL  LL+ A +PPA+NQVE H  WRQ KL+E C S+ VHL
Sbjct: 144 EALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQTKLQEFCKSKGVHL 203

Query: 62  TAYSPL 121
           +AYSPL
Sbjct: 204 SAYSPL 209

Query: 122  181
           
Sbjct: 264  209

Query: 182  200
           
Sbjct: 324  209

[Close]

BLAST of CU124163 vs. Swiss-Prot
Match: GALUR_FRAAN (D-galacturonate reductase OS=Fragaria ananassa GN=GALUR PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.1e-16
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           E+C +LGL + IGVSNF+S  L  LL FA +PPA+NQ+EM+  W+ +KLR+ C ++ +H+
Sbjct: 153 EECKKLGLARGIGVSNFTSSMLEELLSFAEIPPAVNQLEMNPAWQLKKLRDFCKAKGIHV 212

Query: 62  TAYSPL 121
           TAYSPL
Sbjct: 213 TAYSPL 218

Query: 122  181
           
Sbjct: 273  218

Query: 182  200
           
Sbjct: 333  218

[Close]

BLAST of CU124163 vs. Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-15
Identity = 41/66 (62.12%), Postives = 45/66 (68.18%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           E+C  LGL + IGVSNFS+KKL  LL FA + PA NQVEM+ MW+QR LREVC    V L
Sbjct: 153 EECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTLREVCRREGVQL 212

Query: 62  TAYSPL 121
             YSPL
Sbjct: 213 CGYSPL 218

Query: 122  181
           
Sbjct: 273  218

Query: 182  200
           
Sbjct: 333  218

[Close]

BLAST of CU124163 vs. TrEMBL
Match: A0A0A0LTV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043150 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.8e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL
Sbjct: 150 EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 209

Query: 62  TAYSPL 121
           TAYSPL
Sbjct: 210 TAYSPL 215

Query: 122  181
           
Sbjct: 270  215

Query: 182  200
           
Sbjct: 330  215

[Close]

BLAST of CU124163 vs. TrEMBL
Match: R0F0E8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10028376mg PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.3e-20
Identity = 44/66 (66.67%), Postives = 58/66 (87.88%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           E+C+E+GL ++IGVSNFSSKK+  LLDFAS+PP++NQVEMH +WRQRKLREVC   N+H+
Sbjct: 145 ERCLEMGLCRSIGVSNFSSKKIYDLLDFASVPPSVNQVEMHPLWRQRKLREVCEENNIHV 204

Query: 62  TAYSPL 121
           + YSP+
Sbjct: 205 SGYSPI 210

Query: 122  181
           
Sbjct: 265  210

Query: 182  200
           
Sbjct: 325  210

[Close]

BLAST of CU124163 vs. TrEMBL
Match: A0A068UAN3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020347001 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-20
Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           EKC+ +GL + IGVSNFSS+K+  LLDFA++PPA+NQVEMH MWRQRKLREVC   N+H+
Sbjct: 147 EKCLAMGLCRCIGVSNFSSRKVQQLLDFATVPPAVNQVEMHPMWRQRKLREVCRKHNIHV 206

Query: 62  TAYSPL 121
           +AYSPL
Sbjct: 207 SAYSPL 212

Query: 122  181
           
Sbjct: 267  212

Query: 182  200
           
Sbjct: 327  212

[Close]

BLAST of CU124163 vs. TrEMBL
Match: A0A061G738_THECC (NAD(P)-linked oxidoreductase superfamily protein OS=Theobroma cacao GN=TCM_014909 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.7e-20
Identity = 45/66 (68.18%), Postives = 58/66 (87.88%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           EKC+++GL + IGVSNFSSKK+  LL+FAS+PPA+NQVEMH MWRQRKLRE+C+   +H+
Sbjct: 144 EKCLDMGLCRCIGVSNFSSKKVERLLEFASVPPAVNQVEMHPMWRQRKLREICADHKIHV 203

Query: 62  TAYSPL 121
           +AYSPL
Sbjct: 204 SAYSPL 209

Query: 122  181
           
Sbjct: 264  209

Query: 182  200
           
Sbjct: 324  209

[Close]

BLAST of CU124163 vs. TrEMBL
Match: A0A0D2NZS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G113200 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 7.4e-20
Identity = 44/66 (66.67%), Postives = 57/66 (86.36%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           +KC++ GL + IGVSNFS+KK+ HLLDFAS+PPA+NQVEMH MWRQRKLRE+C   ++H+
Sbjct: 145 QKCLDRGLCRCIGVSNFSTKKIEHLLDFASVPPAVNQVEMHPMWRQRKLREICGKHDIHV 204

Query: 62  TAYSPL 121
           + YSPL
Sbjct: 205 SGYSPL 210

Query: 122  181
           
Sbjct: 265  210

Query: 182  200
           
Sbjct: 325  210

[Close]

BLAST of CU124163 vs. NCBI nr
Match: gi|778657514|ref|XP_011651026.1| (PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL
Sbjct: 150 EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 209

Query: 62  TAYSPL 121
           TAYSPL
Sbjct: 210 TAYSPL 215

Query: 122  181
           
Sbjct: 270  215

Query: 182  200
           
Sbjct: 330  215

[Close]

BLAST of CU124163 vs. NCBI nr
Match: gi|659066965|ref|XP_008436964.1| (PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 3.6e-28
Identity = 61/66 (92.42%), Postives = 66/66 (100.00%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           EKCV+LGLTKTIGVSNFSSKKLLHLLDFASLPPA+NQVEMH+MWRQRKLREVCSS+NVH+
Sbjct: 151 EKCVDLGLTKTIGVSNFSSKKLLHLLDFASLPPAVNQVEMHLMWRQRKLREVCSSKNVHV 210

Query: 62  TAYSPL 121
           TAYSPL
Sbjct: 211 TAYSPL 216

Query: 122  181
           
Sbjct: 271  216

Query: 182  200
           
Sbjct: 331  216

[Close]

BLAST of CU124163 vs. NCBI nr
Match: gi|565438058|ref|XP_006282124.1| (hypothetical protein CARUB_v10028376mg [Capsella rubella])

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-20
Identity = 44/66 (66.67%), Postives = 58/66 (87.88%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           E+C+E+GL ++IGVSNFSSKK+  LLDFAS+PP++NQVEMH +WRQRKLREVC   N+H+
Sbjct: 145 ERCLEMGLCRSIGVSNFSSKKIYDLLDFASVPPSVNQVEMHPLWRQRKLREVCEENNIHV 204

Query: 62  TAYSPL 121
           + YSP+
Sbjct: 205 SGYSPI 210

Query: 122  181
           
Sbjct: 265  210

Query: 182  200
           
Sbjct: 325  210

[Close]

BLAST of CU124163 vs. NCBI nr
Match: gi|727540975|ref|XP_010444090.1| (PREDICTED: aldo-keto reductase family 4 member C9-like [Camelina sativa])

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-20
Identity = 44/66 (66.67%), Postives = 58/66 (87.88%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           E+C+E+GL K+IGVSNFSSKK+  LLDFAS+PP++NQVEMH +WRQRKLR+VC   N+H+
Sbjct: 145 ERCLEMGLCKSIGVSNFSSKKIFDLLDFASVPPSVNQVEMHPLWRQRKLRKVCEENNIHV 204

Query: 62  TAYSPL 121
           + YSP+
Sbjct: 205 SGYSPI 210

Query: 122  181
           
Sbjct: 265  210

Query: 182  200
           
Sbjct: 325  210

[Close]

BLAST of CU124163 vs. NCBI nr
Match: gi|727426207|ref|XP_010458904.1| (PREDICTED: aldo-keto reductase family 4 member C9-like [Camelina sativa])

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-20
Identity = 44/66 (66.67%), Postives = 58/66 (87.88%), Query Frame = -1


Query: 2   EKCVELGLTKTIGVSNFSSKKLLHLLDFASLPPAINQVEMHVMWRQRKLREVCSSRNVHL 61
           E+C+E+GL K+IGVSNFSSKK+  LLDFAS+PP++NQVEMH +WRQRKLR+VC   N+H+
Sbjct: 145 ERCLEIGLCKSIGVSNFSSKKIFDLLDFASVPPSVNQVEMHPLWRQRKLRKVCEENNIHV 204

Query: 62  TAYSPL 121
           + YSP+
Sbjct: 205 SGYSPI 210

Query: 122  181
           
Sbjct: 265  210

Query: 182  200
           
Sbjct: 325  210

The following BLAST results are available for this feature:

BLAST of CU124163 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MER_ERYCB	7.6e-18	59.09	Methylecgonone reductase OS=Erythroxylum coca PE=1 SV=1	[more]
COR2_PAPSO	7.6e-18	62.12	Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum GN=CO...	[more]
AKRC9_ARATH	7.1e-16	59.09	Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV...	[more]
GALUR_FRAAN	7.1e-16	54.55	D-galacturonate reductase OS=Fragaria ananassa GN=GALUR PE=1 SV=1	[more]
NADO2_ORYSJ	1.6e-15	62.12	Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=O...	[more]

BLAST of CU124163 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTV7_CUCSA	1.8e-29	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043150 PE=4 SV=1	[more]
R0F0E8_9BRAS	3.3e-20	66.67	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10028376mg PE=4 SV=1	[more]
A0A068UAN3_COFCA	4.3e-20	69.70	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020347001 PE=4 SV=1	[more]
A0A061G738_THECC	5.7e-20	68.18	NAD(P)-linked oxidoreductase superfamily protein OS=Theobroma cacao GN=TCM_01490...	[more]
A0A0D2NZS0_GOSRA	7.4e-20	66.67	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G113200 PE=4 SV=1	[more]

BLAST of CU124163 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778657514\|ref\|XP_011651026.1\|	1.1e-29	100.00	PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis sativus]	[more]
gi\|659066965\|ref\|XP_008436964.1\|	3.6e-28	92.42	PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis melo]	[more]
gi\|565438058\|ref\|XP_006282124.1\|	2.1e-20	66.67	hypothetical protein CARUB_v10028376mg [Capsella rubella]	[more]
gi\|727540975\|ref\|XP_010444090.1\|	2.1e-20	66.67	PREDICTED: aldo-keto reductase family 4 member C9-like [Camelina sativa]	[more]
gi\|727426207\|ref\|XP_010458904.1\|	2.1e-20	66.67	PREDICTED: aldo-keto reductase family 4 member C9-like [Camelina sativa]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001395	Aldo/keto reductase/potassium channel subunit beta
IPR020471	Aldo/keto_reductase
IPR023210	NADP_OxRdtase_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0016491	oxidoreductase activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G043150	Csa1G043150	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02KUIVK	FKNP3UI02KUIVK	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001395	Aldo/keto reductase/potassium channel subunit beta	PANTHER	PTHR11732	ALDO/KETO REDUCTASE	coord: 3..68 score: 1.0
IPR020471	Aldo/keto reductase	PRINTS	PR00069	ALDKETRDTASE	coord: 2..19 score: 3.6E-16coord: 36..65 score: 3.6
IPR023210	NADP-dependent oxidoreductase domain	GENE3D	G3DSA:3.20.20.100		coord: 3..68 score: 4.4
IPR023210	NADP-dependent oxidoreductase domain	PFAM	PF00248	Aldo_ket_red	coord: 3..68 score: 2.5
IPR023210	NADP-dependent oxidoreductase domain	unknown	SSF51430	NAD(P)-linked oxidoreductase	coord: 3..68 score: 7.2
None	No IPR available	PANTHER	PTHR11732:SF230	ALDO/KETO REDUCTASE FAMILY PROTEIN	coord: 3..68 score: 1.0