CU123869 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU123869
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 6660825 .. 6661077 (-)
Sequence length257
The following sequences are available for this feature:

transcribed_cluster sequence

GAGACACAGTTTGTGCATTGTGAAAAATTAAAGGAATGTGATATAAGAGTAGATTCTGTAGATACAGATGAAACTGATGATGAAGAAAATTATTATCACGAGGGGAGGGAAATTCCTTTTAACATCAAGGATTGGGAAATTAATGGAAACTCCAAAGGTGCCAATGATCCTAAACAACATATATACCTCGATTCAAATTCAAGATACTTGGAGAATCACTCTGGTGCTGAAAACAACCAACAAAAGCCAAAAAAAAA
Library categoryESTs
fruit (8DPP) library1
BLAST of CU123869 vs. TrEMBL
Match: A0A0A0LS12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062980 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.6e-35
Identity = 72/85 (84.71%), Postives = 74/85 (87.06%), Query Frame = 1

Query: 1   ETQFVHCEKLKECDIRVDSVXXXXXXXXXNYYHEGREIPFNIKDWEINGNSKGANDPKQH 60
           ETQFVHCEKLKECDIRVDSV         NYYHEGREIPF+IKDWEINGNSKGANDPKQH
Sbjct: 136 ETQFVHCEKLKECDIRVDSVDTDETDDEENYYHEGREIPFDIKDWEINGNSKGANDPKQH 195

Query: 61  IYLDSNSRYLENHSGAENNQQKPKK 120
           IYLDSNSRYLENHSGAENNQ K K+
Sbjct: 196 IYLDSNSRYLENHSGAENNQTKAKE 220

Query: 121 180
           
Sbjct: 256 220

Query: 181 240
           
Sbjct: 316 220

Query: 241 256
           
Sbjct: 376 220

BLAST of CU123869 vs. NCBI nr
Match: gi|778658410|ref|XP_011652674.1| (PREDICTED: uncharacterized protein LOC105435044 [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 7.3e-34
Identity = 72/85 (84.71%), Postives = 74/85 (87.06%), Query Frame = 1

Query: 1   ETQFVHCEKLKECDIRVDSVXXXXXXXXXNYYHEGREIPFNIKDWEINGNSKGANDPKQH 60
           ETQFVHCEKLKECDIRVDSV         NYYHEGREIPF+IKDWEINGNSKGANDPKQH
Sbjct: 136 ETQFVHCEKLKECDIRVDSVDTDETDDEENYYHEGREIPFDIKDWEINGNSKGANDPKQH 195

Query: 61  IYLDSNSRYLENHSGAENNQQKPKK 120
           IYLDSNSRYLENHSGAENNQ K K+
Sbjct: 196 IYLDSNSRYLENHSGAENNQTKAKE 220

Query: 121 180
           
Sbjct: 256 220

Query: 181 240
           
Sbjct: 316 220

Query: 241 256
           
Sbjct: 376 220

BLAST of CU123869 vs. NCBI nr
Match: gi|700209427|gb|KGN64523.1| (hypothetical protein Csa_1G062980 [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 7.3e-34
Identity = 72/85 (84.71%), Postives = 74/85 (87.06%), Query Frame = 1

Query: 1   ETQFVHCEKLKECDIRVDSVXXXXXXXXXNYYHEGREIPFNIKDWEINGNSKGANDPKQH 60
           ETQFVHCEKLKECDIRVDSV         NYYHEGREIPF+IKDWEINGNSKGANDPKQH
Sbjct: 136 ETQFVHCEKLKECDIRVDSVDTDETDDEENYYHEGREIPFDIKDWEINGNSKGANDPKQH 195

Query: 61  IYLDSNSRYLENHSGAENNQQKPKK 120
           IYLDSNSRYLENHSGAENNQ K K+
Sbjct: 196 IYLDSNSRYLENHSGAENNQTKAKE 220

Query: 121 180
           
Sbjct: 256 220

Query: 181 240
           
Sbjct: 316 220

Query: 241 256
           
Sbjct: 376 220

BLAST of CU123869 vs. NCBI nr
Match: gi|659067742|ref|XP_008441076.1| (PREDICTED: uncharacterized protein LOC103485300 [Cucumis melo])

HSP 1 Score: 129.4 bits (324), Expect = 3.0e-27
Identity = 64/85 (75.29%), Postives = 66/85 (77.65%), Query Frame = 1

Query: 1   ETQFVHCEKLKECDIRVDSVXXXXXXXXXNYYHEGREIPFNIKDWEINGNSKGANDPKQH 60
           ETQFVHCEKLKECDIRVD V          YYHEGREIP +IKDWEINGNSK AND KQH
Sbjct: 136 ETQFVHCEKLKECDIRVDRVDTDETDEEDYYYHEGREIPSDIKDWEINGNSKSANDAKQH 195

Query: 61  IYLDSNSRYLENHSGAENNQQKPKK 120
           IYLDSNSRYL NHS AEN Q K K+
Sbjct: 196 IYLDSNSRYLANHSDAENIQTKAKE 220

Query: 121 180
           
Sbjct: 256 220

Query: 181 240
           
Sbjct: 316 220

Query: 241 256
           
Sbjct: 376 220

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LS12_CUCSA4.6e-3584.71Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062980 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778658410|ref|XP_011652674.1|7.3e-3484.71PREDICTED: uncharacterized protein LOC105435044 [Cucumis sativus][more]
gi|700209427|gb|KGN64523.1|7.3e-3484.71hypothetical protein Csa_1G062980 [Cucumis sativus][more]
gi|659067742|ref|XP_008441076.1|3.0e-2775.29PREDICTED: uncharacterized protein LOC103485300 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G062980Csa1G062980gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02KPK1GFKNP3UI02KPK1GEST