CU123593 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU123593
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 3089795 .. 3090306 (+)
Sequence length248
The following sequences are available for this feature:

transcribed_cluster sequence

TTGAATTACAAGGGTCTCCTTTGTTCCAGTTGCTCAGATTCCCATTAGGATCGAACAAACTACTTTTGATGAGGAGCAAAGCGTCCACTTCAGAGGGGTGGGTACCCATTTCTGCTGCAACAACAACTAGTAAGGACGACGAGAAGCAGAGGAGCAGAAGGGCTACATAAGCCCACTGCTGTGATCGACGACACATTTCAGAAGTGGAAGCACTCAAAATACACAAAGAATTGAAAGCTTTGGGGAGG
Library categoryESTs
fruit (8DPP) library1
BLAST of CU123593 vs. TrEMBL
Match: A0A0A0LV88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G028040 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.9e-18
Identity = 47/65 (72.31%), Postives = 47/65 (72.31%), Query Frame = -2

Query: 2   MCRRSQQWAYXXXXXXXXXXXXXXXXXXEMGTHPSEVDALLLIKSSLFDPNGNLSNWNKG 61
           MCRRSQQWAY                  EMGTHPSEVDALLLIKSSLFDPNGNLSNWNKG
Sbjct: 1   MCRRSQQWAYVALLLLCFSSSLLVVVAAEMGTHPSEVDALLLIKSSLFDPNGNLSNWNKG 60

Query: 62  DPCNS 121
           DPCNS
Sbjct: 61  DPCNS 65

Query: 122 181
           
Sbjct: 121 65

Query: 182 197
           
Sbjct: 181 65

BLAST of CU123593 vs. TrEMBL
Match: A0A0B2QAK9_GLYSO (Putative LRR receptor-like serine/threonine-protein kinase OS=Glycine soja GN=glysoja_033753 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-06
Identity = 26/34 (76.47%), Postives = 26/34 (76.47%), Query Frame = -2

Query: 2   THPSEVDALLLIKSSLFDPNGNLSNWNKGDPCNS 61
           T P EVDAL  IKS L DPNGNLSNWN GDPC S
Sbjct: 31  TDPVEVDALRAIKSRLIDPNGNLSNWNDGDPCTS 64

Query: 62  104
           
Sbjct: 91  64

BLAST of CU123593 vs. TrEMBL
Match: I1MZN5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G050700 PE=3 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-06
Identity = 26/34 (76.47%), Postives = 26/34 (76.47%), Query Frame = -2

Query: 2   THPSEVDALLLIKSSLFDPNGNLSNWNKGDPCNS 61
           T P EVDAL  IKS L DPNGNLSNWN GDPC S
Sbjct: 31  TDPVEVDALRAIKSRLIDPNGNLSNWNDGDPCTS 64

Query: 62  104
           
Sbjct: 91  64

BLAST of CU123593 vs. TrEMBL
Match: K4CT54_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.6e-06
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = -2

Query: 2   THPSEVDALLLIKSSLFDPNGNLSNWNKGDPCNS 61
           THP EV AL  IK+SL DPNGNLSNW +GDPC S
Sbjct: 32  THPDEVKALRAIKNSLVDPNGNLSNWRRGDPCIS 65

Query: 62  104
           
Sbjct: 92  65

BLAST of CU123593 vs. NCBI nr
Match: gi|700208830|gb|KGN63926.1| (hypothetical protein Csa_1G028040 [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 4.1e-18
Identity = 47/65 (72.31%), Postives = 47/65 (72.31%), Query Frame = -2

Query: 2   MCRRSQQWAYXXXXXXXXXXXXXXXXXXEMGTHPSEVDALLLIKSSLFDPNGNLSNWNKG 61
           MCRRSQQWAY                  EMGTHPSEVDALLLIKSSLFDPNGNLSNWNKG
Sbjct: 1   MCRRSQQWAYVALLLLCFSSSLLVVVAAEMGTHPSEVDALLLIKSSLFDPNGNLSNWNKG 60

Query: 62  DPCNS 121
           DPCNS
Sbjct: 61  DPCNS 65

Query: 122 181
           
Sbjct: 121 65

Query: 182 197
           
Sbjct: 181 65

BLAST of CU123593 vs. NCBI nr
Match: gi|449439195|ref|XP_004137372.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 4.1e-18
Identity = 47/65 (72.31%), Postives = 47/65 (72.31%), Query Frame = -2

Query: 2   MCRRSQQWAYXXXXXXXXXXXXXXXXXXEMGTHPSEVDALLLIKSSLFDPNGNLSNWNKG 61
           MCRRSQQWAY                  EMGTHPSEVDALLLIKSSLFDPNGNLSNWNKG
Sbjct: 1   MCRRSQQWAYVALLLLCFSSSLLVVVAAEMGTHPSEVDALLLIKSSLFDPNGNLSNWNKG 60

Query: 62  DPCNS 121
           DPCNS
Sbjct: 61  DPCNS 65

Query: 122 181
           
Sbjct: 121 65

Query: 182 197
           
Sbjct: 181 65

BLAST of CU123593 vs. NCBI nr
Match: gi|659114903|ref|XP_008457284.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-17
Identity = 46/65 (70.77%), Postives = 46/65 (70.77%), Query Frame = -2

Query: 2   MCRRSQQWAYXXXXXXXXXXXXXXXXXXEMGTHPSEVDALLLIKSSLFDPNGNLSNWNKG 61
           MCRRSQQWAY                  EMGTHPSEVDALLLIK SLFDPNGNLSNWNKG
Sbjct: 1   MCRRSQQWAYVALLLLCFSSSLLIVVAAEMGTHPSEVDALLLIKRSLFDPNGNLSNWNKG 60

Query: 62  DPCNS 121
           DPCNS
Sbjct: 61  DPCNS 65

Query: 122 181
           
Sbjct: 121 65

Query: 182 197
           
Sbjct: 181 65

BLAST of CU123593 vs. NCBI nr
Match: gi|698548318|ref|XP_009768306.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Nicotiana sylvestris])

HSP 1 Score: 58.2 bits (139), Expect = 8.1e-06
Identity = 25/34 (73.53%), Postives = 26/34 (76.47%), Query Frame = -2

Query: 2   THPSEVDALLLIKSSLFDPNGNLSNWNKGDPCNS 61
           THP EV AL  IK SL DPNGNLSNW +GDPC S
Sbjct: 31  THPDEVKALRAIKKSLVDPNGNLSNWRRGDPCRS 64

Query: 62  104
           
Sbjct: 91  64

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LV88_CUCSA2.9e-1872.31Uncharacterized protein OS=Cucumis sativus GN=Csa_1G028040 PE=4 SV=1[more]
A0A0B2QAK9_GLYSO7.3e-0676.47Putative LRR receptor-like serine/threonine-protein kinase OS=Glycine soja GN=gl... [more]
I1MZN5_SOYBN7.3e-0676.47Uncharacterized protein OS=Glycine max GN=GLYMA_18G050700 PE=3 SV=2[more]
K4CT54_SOLLC9.6e-0673.53Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700208830|gb|KGN63926.1|4.1e-1872.31hypothetical protein Csa_1G028040 [Cucumis sativus][more]
gi|449439195|ref|XP_004137372.1|4.1e-1872.31PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 ... [more]
gi|659114903|ref|XP_008457284.1|1.6e-1770.77PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 ... [more]
gi|698548318|ref|XP_009768306.1|8.1e-0673.53PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 ... [more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR013210LRR_N_plant-typ

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G028040Csa1G028040gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02KLA5KFKNP3UI02KLA5KEST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013210Leucine-rich repeat-containing N-terminal, plant-typePFAMPF08263LRRNT_2coord: 5..35
score: 4.