CU123025 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU123025
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 27718210 .. 27718473 (+)
Sequence length265
The following sequences are available for this feature:

transcribed_cluster sequence

CGCTTCGACATCTCGGCGAAGGCGGCGAAGAATGTAGTGTCGGGAACGCCGCCGGAGTTCAGGATTTTACCGCTGGTTTAGATTTCCGAAGAGAGAGCATTCCATTTTCGCGTGGACGAGTTGGAGGTATTTTGGAGCGGGTGAATTTAGCGAATATGGAGTTGGGGTTTTGAGAAATGAAGATTTTAGGGTTTACTGGTTTGAGCTTCTTGAATTTTTCGAACATTTGGTGGTTTAGCTGCTTATCATGGGTAAGGGAATCGTT
Library categoryESTs
fruit (8DPP) library1
BLAST of CU123025 vs. TrEMBL
Match: A0A0A0KNM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G520250 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.6e-17
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = -1

Query: 131 NDSLTHDKQLNHQMFEKFKKLKPVNPKIFISQNPNSIFAKFTRSK 190
           NDSLTHDKQLNHQMFEKFKKLKPVNPKIFISQNPNSIFAKFTRSK
Sbjct: 294 NDSLTHDKQLNHQMFEKFKKLKPVNPKIFISQNPNSIFAKFTRSK 338

Query: 191 250
           
Sbjct: 354 338

Query: 251 266
           
Sbjct: 414 338

BLAST of CU123025 vs. TrEMBL
Match: A0A0A0KNM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G520250 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-02
Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = -2

Query: 70  KYLQLVHAKMECSLFGNLNQR 129
           KYLQLVHAKMECSLFGNLNQR
Sbjct: 338 KYLQLVHAKMECSLFGNLNQR 358

Query: 130 133
           
Sbjct: 398 358


HSP 2 Score: 47.4 bits (111), Expect = 1.1e-02
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = -3

Query: 3   KILNSGGVPDTTFFAAFAEMSK 62
           KILNSGGVPDTTFFAAFAEMSK
Sbjct: 359 KILNSGGVPDTTFFAAFAEMSK 380

Query: 63  69
           
Sbjct: 419 380


HSP 3 Score: 87.4 bits (215), Expect = 9.3e-15
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = -1

Query: 131 NDSLTHDKQLNHQMFEKFKKLKPVNPKIFISQNPNSIFAKFTRSK 190
           +DSL HDKQLNHQMFEKF KLKPVNPKIFISQNPNS FAKFTRSK
Sbjct: 294 HDSLPHDKQLNHQMFEKFMKLKPVNPKIFISQNPNSTFAKFTRSK 338

Query: 191 250
           
Sbjct: 354 338

Query: 251 266
           
Sbjct: 414 338

BLAST of CU123025 vs. TrEMBL
Match: E5GC28_CUCME (UNE1-like protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-02
Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = -2

Query: 70  KYLQLVHAKMECSLFGNLNQR 129
           KYLQLVHAKMECSLFGNLNQR
Sbjct: 338 KYLQLVHAKMECSLFGNLNQR 358

Query: 130 133
           
Sbjct: 398 358


HSP 2 Score: 47.4 bits (111), Expect = 1.1e-02
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = -3

Query: 3   KILNSGGVPDTTFFAAFAEMSK 62
           KILNSGGVPDTTFFAAFAEMSK
Sbjct: 359 KILNSGGVPDTTFFAAFAEMSK 380

Query: 63  69
           
Sbjct: 419 380

BLAST of CU123025 vs. NCBI nr
Match: gi|449433629|ref|XP_004134600.1| (PREDICTED: uncharacterized protein LOC101220727 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = -1

Query: 131 NDSLTHDKQLNHQMFEKFKKLKPVNPKIFISQNPNSIFAKFTRSK 190
           NDSLTHDKQLNHQMFEKFKKLKPVNPKIFISQNPNSIFAKFTRSK
Sbjct: 294 NDSLTHDKQLNHQMFEKFKKLKPVNPKIFISQNPNSIFAKFTRSK 338

Query: 191 250
           
Sbjct: 354 338

Query: 251 266
           
Sbjct: 414 338

BLAST of CU123025 vs. NCBI nr
Match: gi|659078425|ref|XP_008439717.1| (PREDICTED: uncharacterized protein LOC103484433 [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 3.9e-14
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = -1

Query: 131 NDSLTHDKQLNHQMFEKFKKLKPVNPKIFISQNPNSIFAKFTRSK 190
           +DSL HDKQLNHQMFEKF KLKPVNPKIFISQNPNS FAKFTRSK
Sbjct: 294 HDSLPHDKQLNHQMFEKFMKLKPVNPKIFISQNPNSTFAKFTRSK 338

Query: 191 250
           
Sbjct: 354 338

Query: 251 266
           
Sbjct: 414 338

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KNM5_CUCSA2.6e-17100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G520250 PE=4 SV=1[more]
A0A0A0KNM5_CUCSA1.1e-02100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G520250 PE=4 SV=1[more]
E5GC28_CUCME1.1e-02100.00UNE1-like protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449433629|ref|XP_004134600.1|1.1e-16100.00PREDICTED: uncharacterized protein LOC101220727 [Cucumis sativus][more]
gi|659078425|ref|XP_008439717.1|3.9e-1491.11PREDICTED: uncharacterized protein LOC103484433 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G520250Csa6G520250gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02K6INCFKNP3UI02K6INCEST