CU122306 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU122306
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Glutamate receptor
Location	Chr2 : 20014859 .. 20016554 (+)
Sequence length	783

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AATTCGGCACGAGGAGAAAGAGGAAGTGCAAGCCATTATAGGTCCAACAAGCTCTATGCAAGCCAACTTCATCATCAACATTGGAGACAAAGCAGAAGTTCCCATCATCTCATTTTCAGCCACACGACCTTCCCTCACTTCCCACCGCAGCTCTTTCTTCTTCCGAGCCGCTCAAAACGATTCATCTCAAGTCAAAGCCATTGGAGCCATTGTTAAGACCTTCAAATGGCGACAAGTCGTCCCCATCTATAGCGACAATGAGTTCGGCGAAGGTATCATCCCTTACTTAATTGACGCTTTACAAGAAGTCGACACCGATGTGCCATACCAAAGCAAAATTTCCCCCTCTGCCAAAGACAAGCAAATCATCGACGAGCTTAACAACTTGATGAAAATGCCAACTAGAGTGTTTGTAGTGCACATGGCACCCCACCATGCTTCACGATTGTTTACAATGGCTAAAGAAATTGGAATGATGAAACGAGGTTACGTTTGGATAATCACAGATGCTATAGCAAATCTATTGGATTTAATACACCCTTCAGTCCTTAAGGCAATGCAAGGAGTTGTGGGAATAAAAACTTACGTCCCAAGATCCAAAGGGCTTGATTCTTTCAAACATGATTGGAGGAGAGATTTATGAGTTATTATCCAAGAAGAAAGGAGAGACATCAGAGGTAGACGTGTTGGGTTATGGGGTATGACGCAGCTTGGCGCTTGCATAGCTGTAGAAAAGCTGGGACGACATCTTCGGTACTCCTCAACCAACATTACCGCATCAAA

Library


Library category	ESTs
other	1

Homology

[Close]

BLAST of CU122306 vs. Swiss-Prot
Match: GLR26_ARATH (Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-61
Identity = 117/207 (56.52%), Postives = 155/207 (74.88%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           +K EV AIIGP +SMQA F+IN+G++++VPIISFSA+ P L S RS +F RA  +DSSQV
Sbjct: 97  KKREVVAIIGPGNSMQAPFLINLGNQSQVPIISFSASSPVLDSLRSPYFIRATHDDSSQV 156

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
            AI AI+++F+WR+VVPIY+DNEFGEGI+PYL+DA QE++  + Y+S IS  + D  +  
Sbjct: 157 HAISAIIESFRWREVVPIYADNEFGEGILPYLVDAFQEINVRIRYRSAISVHSTDDLVKK 216

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           EL  LM MPTRVF+VHM P   SRLF++AKEIGMM +GYVWI+T+ IA+ + ++  S L+
Sbjct: 217 ELYKLMTMPTRVFIVHMLPDLGSRLFSIAKEIGMMTKGYVWIVTNGIADQMSVMGESSLE 276

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWRR 253
            M GV+G+KTY  RSK L   +  WR+
Sbjct: 277 NMHGVLGVKTYFSRSKELMYLETRWRK 303

Query: 254  313
           
Sbjct: 337  303

Query: 314  373
           
Sbjct: 397  303

Query: 374  433
           
Sbjct: 457  303

Query: 434  493
           
Sbjct: 517  303

Query: 494  553
           
Sbjct: 577  303

Query: 554  613
           
Sbjct: 637  303

Query: 614  635
           
Sbjct: 697  303

[Close]

BLAST of CU122306 vs. Swiss-Prot
Match: GLR22_ARATH (Glutamate receptor 2.2 OS=Arabidopsis thaliana GN=GLR2.2 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.3e-61
Identity = 112/207 (54.11%), Postives = 157/207 (75.85%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           + ++V+AI+GP +SMQA+F+I IG K+ VP++S+SAT PSLTS RS +FFRA   DSSQV
Sbjct: 93  KNKQVKAILGPWTSMQAHFLIEIGQKSRVPVVSYSATSPSLTSLRSPYFFRATYEDSSQV 152

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
            AI AI+K F WR+VVP+Y DN FGEGI+P L D+LQ+++  +PY+S I  +A D+ I  
Sbjct: 153 HAIKAIIKLFGWREVVPVYIDNTFGEGIMPRLTDSLQDINVRIPYRSVIPLNATDQDISV 212

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           EL  +M MPTRVF+VHM+   AS +F  AKE+G+MK GYVWI+T+ + + L  I+ + ++
Sbjct: 213 ELLKMMNMPTRVFIVHMSSSLASTVFIKAKELGLMKPGYVWILTNGVMDGLRSINETGIE 272

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWRR 253
           AM+GV+GIKTY+P+SK L++F+  W+R
Sbjct: 273 AMEGVLGIKTYIPKSKDLETFRSRWKR 299

Query: 254  313
           
Sbjct: 333  299

Query: 314  373
           
Sbjct: 393  299

Query: 374  433
           
Sbjct: 453  299

Query: 434  493
           
Sbjct: 513  299

Query: 494  553
           
Sbjct: 573  299

Query: 554  613
           
Sbjct: 633  299

Query: 614  635
           
Sbjct: 693  299

[Close]

BLAST of CU122306 vs. Swiss-Prot
Match: GLR21_ARATH (Glutamate receptor 2.1 OS=Arabidopsis thaliana GN=GLR2.1 PE=2 SV=2)

HSP 1 Score: 233.8 bits (595), Expect = 2.1e-60
Identity = 110/205 (53.66%), Postives = 154/205 (75.12%), Query Frame = 2


Query: 20  EEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKA 79
           +EV+AI+GP +SMQA F+I +G K++VPI+++SAT PSL S RS +FFRA  +DSSQV A
Sbjct: 95  KEVKAILGPWTSMQAQFMIEMGQKSQVPIVTYSATSPSLASIRSQYFFRATYDDSSQVHA 154

Query: 80  IGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIIDEL 139
           I  I+K F WR+V P+Y D+ FGEGI+P L D LQE++  +PY++ ISP+A D +I  EL
Sbjct: 155 IKEIIKLFGWREVAPVYVDDTFGEGIMPRLTDVLQEINVRIPYRTVISPNATDDEISVEL 214

Query: 140 NNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLKAM 199
             +M +PTRVFVVH+    ASR F  A EIG+MK+GYVWI+T+ I ++L +++ + ++ M
Sbjct: 215 LRMMTLPTRVFVVHLVELLASRFFAKATEIGLMKQGYVWILTNTITDVLSIMNETEIETM 274

Query: 200 QGVVGIKTYVPRSKGLDSFKHDWRR 259
           QGV+G+KTYVPRSK L++F+  W +
Sbjct: 275 QGVLGVKTYVPRSKELENFRSRWTK 299

Query: 260  319
           
Sbjct: 335  299

Query: 320  379
           
Sbjct: 395  299

Query: 380  439
           
Sbjct: 455  299

Query: 440  499
           
Sbjct: 515  299

Query: 500  559
           
Sbjct: 575  299

Query: 560  619
           
Sbjct: 635  299

Query: 620  635
           
Sbjct: 695  299

[Close]

BLAST of CU122306 vs. Swiss-Prot
Match: GLR25_ARATH (Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=2 SV=2)

HSP 1 Score: 232.6 bits (592), Expect = 4.7e-60
Identity = 116/207 (56.04%), Postives = 153/207 (73.91%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           +K EV AIIGP +SMQA F+IN+G++++VPIISFSAT P L S RS +F RA  +DSSQV
Sbjct: 98  KKREVVAIIGPGTSMQAPFLINLGNQSKVPIISFSATSPLLDSLRSPYFIRATHDDSSQV 157

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
           +AI AI+++F+WR+VVPIY DNEFGEGI+P L+DA QE++  + Y+S IS    D QI  
Sbjct: 158 QAISAIIESFRWREVVPIYVDNEFGEGILPNLVDAFQEINVRIRYRSAISLHYSDDQIKK 217

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           EL  LM MPTRVF+VHM P   SRLF++AKEI M+ +GYVWI+T+ IA+L+ ++  S L 
Sbjct: 218 ELYKLMTMPTRVFIVHMLPDLGSRLFSIAKEIDMLSKGYVWIVTNGIADLMSIMGESSLV 277

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWRR 253
            M GV+G+KTY  +SK L   +  W++
Sbjct: 278 NMHGVLGVKTYFAKSKELLHLEARWQK 304

Query: 254  313
           
Sbjct: 338  304

Query: 314  373
           
Sbjct: 398  304

Query: 374  433
           
Sbjct: 458  304

Query: 434  493
           
Sbjct: 518  304

Query: 494  553
           
Sbjct: 578  304

Query: 554  613
           
Sbjct: 638  304

Query: 614  635
           
Sbjct: 698  304

[Close]

BLAST of CU122306 vs. Swiss-Prot
Match: GLR23_ARATH (Glutamate receptor 2.3 OS=Arabidopsis thaliana GN=GLR2.3 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.5e-58
Identity = 110/206 (53.40%), Postives = 152/206 (73.79%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           + ++V+AI+GP +SMQA+F+I IG K+ VPI+S+SAT P LTS RS +F RA   DS QV
Sbjct: 92  KNKQVKAILGPWTSMQAHFLIEIGQKSRVPIVSYSATSPILTSLRSPYFLRATYEDSFQV 151

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
           + I AI+K F WR+VVP+Y DN FGEGI+P L DALQ+++  +PY+S I+ +A D +I  
Sbjct: 152 QPIKAIIKLFGWREVVPVYIDNTFGEGIMPRLTDALQDINVRIPYRSVIAINATDHEISV 211

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           EL  +M MPTRVF+VHM    ASR F  AKE+G+M+ GYVWI+T+ + + L LI+ + ++
Sbjct: 212 ELLKMMNMPTRVFLVHMYYDLASRFFIKAKELGLMEPGYVWILTNGVIDDLSLINETAVE 271

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWR 253
           AM+GV+GIKTY+P+S  L+ F+  WR
Sbjct: 272 AMEGVLGIKTYIPKSPDLEKFRSRWR 297

Query: 254  313
           
Sbjct: 332  297

Query: 314  373
           
Sbjct: 392  297

Query: 374  433
           
Sbjct: 452  297

Query: 434  493
           
Sbjct: 512  297

Query: 494  553
           
Sbjct: 572  297

Query: 554  613
           
Sbjct: 632  297

Query: 614  632
           
Sbjct: 692  297

[Close]

BLAST of CU122306 vs. TrEMBL
Match: A0A0A0LQH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383390 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.6e-110
Identity = 218/246 (88.62%), Postives = 222/246 (90.24%), Query Frame = 2


Query: 56  MQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQ 115
           MQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQ
Sbjct: 1   MQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQ 60

Query: 116 VVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIIDELNNLMKMPTRVFV 175
           VVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIIDELNNLMKMPTRVFV
Sbjct: 61  VVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIIDELNNLMKMPTRVFV 120

Query: 176 VHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLKAMQGVVGIKTYVPR 235
           VHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLKAMQGVVGIKTYVPR
Sbjct: 121 VHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLKAMQGVVGIKTYVPR 180

Query: 236 SKGLDSFKHDWR-RDL*VIIQEERRDIRGRRV-GLWGMTQLGA-CIAVEKLGR-HLRYSS 295
           SKGLDSFKHDWR R +    + +  DI    V GLWG     A  IAVEK G  +LRYSS
Sbjct: 181 SKGLDSFKHDWRKRFMSYYPRRKEEDIPEVDVFGLWGYDAAWALAIAVEKAGTDNLRYSS 240

Query: 296 TNITAS 355
           TNITAS
Sbjct: 241 TNITAS 246

Query: 356  415
           
Sbjct: 301  246

Query: 416  475
           
Sbjct: 361  246

Query: 476  535
           
Sbjct: 421  246

Query: 536  595
           
Sbjct: 481  246

Query: 596  655
           
Sbjct: 541  246

Query: 656  715
           
Sbjct: 601  246

Query: 716  775
           
Sbjct: 661  246

Query: 776  782
           
Sbjct: 721  246

[Close]

BLAST of CU122306 vs. TrEMBL
Match: A0A0A0LSQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383920 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 7.6e-89
Identity = 185/259 (71.43%), Postives = 208/259 (80.31%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           +K EVQAIIGPTSSMQA+F+I+IGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV
Sbjct: 111 KKVEVQAIIGPTSSMQASFMIDIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 170

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
           KAIGAI+KTFKWRQVVPIYS+NEFG+GIIP LI+ALQEVDTDVPYQSKISP+A D+QI  
Sbjct: 171 KAIGAIIKTFKWRQVVPIYSNNEFGDGIIPDLINALQEVDTDVPYQSKISPTATDEQIGH 230

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           EL  LM M TRVFVVHM   HASRLF  AKEIGMMK GYVWIITDAI N LDLI PSVL+
Sbjct: 231 ELYKLMTMQTRVFVVHMLARHASRLFAKAKEIGMMKEGYVWIITDAIGNTLDLIEPSVLE 290

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWRRDL*VIIQEERRDIRGRRV-GLWGMTQLGACI-A 253
           +MQGV+GI+T+VP++K L+ FK +WR+           DI    V GLW      A   A
Sbjct: 291 SMQGVLGIRTHVPKTKRLEGFKLEWRKRF-RRYYPTIEDIPDLNVFGLWAYDAAWALAKA 350

Query: 254 VEKLGRH-LRYS-STNITA 313
           VEK G H L+Y  +TNI+A
Sbjct: 351 VEKAGAHNLKYKPATNISA 368

Query: 314  373
           
Sbjct: 411  368

Query: 374  433
           
Sbjct: 471  368

Query: 434  493
           
Sbjct: 531  368

Query: 494  553
           
Sbjct: 591  368

Query: 554  613
           
Sbjct: 651  368

Query: 614  673
           
Sbjct: 711  368

Query: 674  733
           
Sbjct: 771  368

Query: 734  779
           
Sbjct: 831  368

[Close]

BLAST of CU122306 vs. TrEMBL
Match: A0A0A0LMA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383370 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 4.7e-83
Identity = 169/257 (65.76%), Postives = 197/257 (76.65%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           +KEEVQAIIGPTSSMQANF+I+IGDKA VPIISFSATRPSLTSHRS FFFR AQ+DSSQV
Sbjct: 103 KKEEVQAIIGPTSSMQANFMIDIGDKAHVPIISFSATRPSLTSHRSPFFFRVAQDDSSQV 162

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
           KAIGAIVKTFKWR VVPIY DNEFG+GIIPYLI+ALQEV+T VPYQS ISP   D  +  
Sbjct: 163 KAIGAIVKTFKWRNVVPIYVDNEFGDGIIPYLINALQEVNTHVPYQSIISPDVTDDHLTS 222

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           EL  LM M TRVFVVHM P  ASR+F  AK+IGMMK+ YVWIITD++ N+L+ I PS  +
Sbjct: 223 ELYKLMTMQTRVFVVHMLPDLASRIFMKAKQIGMMKKEYVWIITDSVTNMLESIKPSTFE 282

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWRRDL*VIIQEERRDIRGRRV-GLWGMTQLGA-CIA 253
           +MQGV+G+KTYVPR++ L+SF+ DWR+   +    +  D     V  LW      A  IA
Sbjct: 283 SMQGVIGLKTYVPRTEKLESFERDWRKRF-LRYYPKMGDAPALDVFALWAYDAAWALAIA 342

Query: 254 VEKLGR-HLRYSSTNIT 313
           VEK G  +L+YS TN T
Sbjct: 343 VEKAGTDNLKYSQTNFT 358

Query: 314  373
           
Sbjct: 403  358

Query: 374  433
           
Sbjct: 463  358

Query: 434  493
           
Sbjct: 523  358

Query: 494  553
           
Sbjct: 583  358

Query: 554  613
           
Sbjct: 643  358

Query: 614  673
           
Sbjct: 703  358

Query: 674  733
           
Sbjct: 763  358

Query: 734  776
           
Sbjct: 823  358

[Close]

BLAST of CU122306 vs. TrEMBL
Match: A5AVQ8_VITVI (Glutamate receptor OS=Vitis vinifera GN=VIT_04s0069g00060 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.0e-70
Identity = 145/259 (55.98%), Postives = 181/259 (69.88%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           + EEVQAIIGP SS+QANF+I +GDKA VPIISFSAT PSL+S RS +F RA  NDS+QV
Sbjct: 72  QNEEVQAIIGPASSLQANFVIGLGDKAHVPIISFSATSPSLSSLRSQYFVRATLNDSAQV 131

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
            AI AIV+ F WRQVV IY DNE+G G+IPYL DALQE+DT + Y+S I P A D QI++
Sbjct: 132 PAIRAIVQAFGWRQVVLIYLDNEYGNGVIPYLTDALQEIDTRISYRSVIHPLATDDQILE 191

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           EL  LM MPTRVF+VHM      RLF  A EIGMM+ GYVWI+TD + ++L  + PSV+ 
Sbjct: 192 ELYKLMTMPTRVFIVHMFAPIGPRLFVRANEIGMMEEGYVWILTDGLTDILGTLDPSVID 251

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWRRDL*VIIQEE---RRDIRGRRVGLWGM-TQLGAC 253
           +MQGV+G+K +VPRSK L+SFK  W+R+    IQ+E            GLW      G  
Sbjct: 252 SMQGVLGVKPHVPRSKKLESFKIRWKRE----IQQEYPTNESFELNIFGLWAYDAACGLA 311

Query: 254 IAVEKLG-RHLRYSSTNIT 313
           +AVEKLG  + R+  +N +
Sbjct: 312 MAVEKLGATNFRFQKSNFS 326

Query: 314  373
           
Sbjct: 372  326

Query: 374  433
           
Sbjct: 432  326

Query: 434  493
           
Sbjct: 492  326

Query: 494  553
           
Sbjct: 552  326

Query: 554  613
           
Sbjct: 612  326

Query: 614  673
           
Sbjct: 672  326

Query: 674  733
           
Sbjct: 732  326

Query: 734  776
           
Sbjct: 792  326

[Close]

BLAST of CU122306 vs. TrEMBL
Match: B9HB97_POPTR (Glutamate receptor OS=Populus trichocarpa GN=POPTR_0006s28420g PE=3 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 1.7e-69
Identity = 145/259 (55.98%), Postives = 187/259 (72.20%), Query Frame = 2


Query: 23  EVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAI 82
           EVQAI+GPT+SMQANF+I++G+KA+VPIISFSAT PSLTS RSS+F RA QNDS+QV AI
Sbjct: 77  EVQAILGPTTSMQANFVIDLGEKAQVPIISFSATSPSLTSIRSSYFLRATQNDSAQVNAI 136

Query: 83  GAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIIDELN 142
            AIV+ F WR+ VPIY DNE+GEGIIPYLIDALQEVD  VPY+S ISPSA D QI++EL 
Sbjct: 137 SAIVQAFGWREAVPIYIDNEYGEGIIPYLIDALQEVDARVPYRSVISPSATDDQIVEELY 196

Query: 143 NLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIA-NLLDLIHPSVLKAM 202
            LM M TRVF+VHM P   +RLFT AKEIGMM  GYVWI+TD ++ + L   + SV   +
Sbjct: 197 RLMTMQTRVFIVHMYPSLGTRLFTKAKEIGMMSEGYVWIMTDGLSVDFLSSPNHSVTDTI 256

Query: 203 QGVVGIKTYVPRSKGLDSFKHDWRRDL*VIIQEERRDIRGRRVGLWGMTQLGA----CIA 262
           QGV+GIK YVPR+K L+ F+  W+R     +++    I    + ++G+    A     +A
Sbjct: 257 QGVLGIKPYVPRTKELEYFRAQWKRK---FLRDNPNKI-DAELNIYGLLAYDAATALALA 316

Query: 263 VEKLG-RHLRYSSTNITAS 322
           VEK G  +  +   N++++
Sbjct: 317 VEKAGTTNFGFQKANVSSN 331

Query: 323  382
           
Sbjct: 377  331

Query: 383  442
           
Sbjct: 437  331

Query: 443  502
           
Sbjct: 497  331

Query: 503  562
           
Sbjct: 557  331

Query: 563  622
           
Sbjct: 617  331

Query: 623  682
           
Sbjct: 677  331

Query: 683  742
           
Sbjct: 737  331

Query: 743  782
           
Sbjct: 797  331

[Close]

BLAST of CU122306 vs. NCBI nr
Match: gi|778674395|ref|XP_011650201.1| (PREDICTED: glutamate receptor 2.5-like [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 1.0e-118
Identity = 231/260 (88.85%), Postives = 236/260 (90.77%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           +KEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV
Sbjct: 99  KKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 158

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
           KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID
Sbjct: 159 KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 218

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK
Sbjct: 219 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 278

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWR-RDL*VIIQEERRDIRGRRV-GLWGMTQLGA-CI 253
           AMQGVVGIKTYVPRSKGLDSFKHDWR R +    + +  DI    V GLWG     A  I
Sbjct: 279 AMQGVVGIKTYVPRSKGLDSFKHDWRKRFMSYYPRRKEEDIPEVDVFGLWGYDAAWALAI 338

Query: 254 AVEKLGR-HLRYSSTNITAS 313
           AVEK G  +LRYSSTNITAS
Sbjct: 339 AVEKAGTDNLRYSSTNITAS 358

Query: 314  373
           
Sbjct: 399  358

Query: 374  433
           
Sbjct: 459  358

Query: 434  493
           
Sbjct: 519  358

Query: 494  553
           
Sbjct: 579  358

Query: 554  613
           
Sbjct: 639  358

Query: 614  673
           
Sbjct: 699  358

Query: 674  733
           
Sbjct: 759  358

Query: 734  782
           
Sbjct: 819  358

[Close]

BLAST of CU122306 vs. NCBI nr
Match: gi|659089045|ref|XP_008445299.1| (PREDICTED: glutamate receptor 2.5-like isoform X2 [Cucumis melo])

HSP 1 Score: 414.1 bits (1063), Expect = 1.8e-112
Identity = 220/260 (84.62%), Postives = 231/260 (88.85%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           +KEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV
Sbjct: 97  KKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 156

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
           KAIGAIVKTFKWRQVVPI+SDNEFGEGIIPYLIDALQEVDTDVPYQSKIS SA+D+QIID
Sbjct: 157 KAIGAIVKTFKWRQVVPIHSDNEFGEGIIPYLIDALQEVDTDVPYQSKISASARDEQIID 216

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           ELNNLMKMPTRVFVVHMAPHHASRLFT AKEIGMMKRGYVWIITDAIANLLDLI PSVL+
Sbjct: 217 ELNNLMKMPTRVFVVHMAPHHASRLFTKAKEIGMMKRGYVWIITDAIANLLDLIDPSVLE 276

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWRRDL*VII-QEERRDIRGRRV-GLWGMTQLGA-CI 253
           AMQGVVGIKTYVPRSKGLDSFKHDWR+       + +  DI    V GLW      A  +
Sbjct: 277 AMQGVVGIKTYVPRSKGLDSFKHDWRKRFQSYYPRRKEEDIPEVDVFGLWAYDAAWALAM 336

Query: 254 AVEKLGR-HLRYSSTNITAS 313
           AVEK G  +LRY+STNITAS
Sbjct: 337 AVEKAGTDNLRYTSTNITAS 356

Query: 314  373
           
Sbjct: 397  356

Query: 374  433
           
Sbjct: 457  356

Query: 434  493
           
Sbjct: 517  356

Query: 494  553
           
Sbjct: 577  356

Query: 554  613
           
Sbjct: 637  356

Query: 614  673
           
Sbjct: 697  356

Query: 674  733
           
Sbjct: 757  356

Query: 734  782
           
Sbjct: 817  356

[Close]

BLAST of CU122306 vs. NCBI nr
Match: gi|659089041|ref|XP_008445296.1| (PREDICTED: glutamate receptor 2.5-like isoform X1 [Cucumis melo])

HSP 1 Score: 414.1 bits (1063), Expect = 1.8e-112
Identity = 220/260 (84.62%), Postives = 231/260 (88.85%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           +KEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV
Sbjct: 109 KKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 168

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
           KAIGAIVKTFKWRQVVPI+SDNEFGEGIIPYLIDALQEVDTDVPYQSKIS SA+D+QIID
Sbjct: 169 KAIGAIVKTFKWRQVVPIHSDNEFGEGIIPYLIDALQEVDTDVPYQSKISASARDEQIID 228

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           ELNNLMKMPTRVFVVHMAPHHASRLFT AKEIGMMKRGYVWIITDAIANLLDLI PSVL+
Sbjct: 229 ELNNLMKMPTRVFVVHMAPHHASRLFTKAKEIGMMKRGYVWIITDAIANLLDLIDPSVLE 288

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWRRDL*VII-QEERRDIRGRRV-GLWGMTQLGA-CI 253
           AMQGVVGIKTYVPRSKGLDSFKHDWR+       + +  DI    V GLW      A  +
Sbjct: 289 AMQGVVGIKTYVPRSKGLDSFKHDWRKRFQSYYPRRKEEDIPEVDVFGLWAYDAAWALAM 348

Query: 254 AVEKLGR-HLRYSSTNITAS 313
           AVEK G  +LRY+STNITAS
Sbjct: 349 AVEKAGTDNLRYTSTNITAS 368

Query: 314  373
           
Sbjct: 409  368

Query: 374  433
           
Sbjct: 469  368

Query: 434  493
           
Sbjct: 529  368

Query: 494  553
           
Sbjct: 589  368

Query: 554  613
           
Sbjct: 649  368

Query: 614  673
           
Sbjct: 709  368

Query: 674  733
           
Sbjct: 769  368

Query: 734  782
           
Sbjct: 829  368

[Close]

BLAST of CU122306 vs. NCBI nr
Match: gi|700207898|gb|KGN63017.1| (hypothetical protein Csa_2G383390 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 2.0e-111
Identity = 218/246 (88.62%), Postives = 222/246 (90.24%), Query Frame = 2


Query: 56  MQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQ 115
           MQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQ
Sbjct: 1   MQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQ 60

Query: 116 VVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIIDELNNLMKMPTRVFV 175
           VVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIIDELNNLMKMPTRVFV
Sbjct: 61  VVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIIDELNNLMKMPTRVFV 120

Query: 176 VHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLKAMQGVVGIKTYVPR 235
           VHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLKAMQGVVGIKTYVPR
Sbjct: 121 VHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLKAMQGVVGIKTYVPR 180

Query: 236 SKGLDSFKHDWR-RDL*VIIQEERRDIRGRRV-GLWGMTQLGA-CIAVEKLGR-HLRYSS 295
           SKGLDSFKHDWR R +    + +  DI    V GLWG     A  IAVEK G  +LRYSS
Sbjct: 181 SKGLDSFKHDWRKRFMSYYPRRKEEDIPEVDVFGLWGYDAAWALAIAVEKAGTDNLRYSS 240

Query: 296 TNITAS 355
           TNITAS
Sbjct: 241 TNITAS 246

Query: 356  415
           
Sbjct: 301  246

Query: 416  475
           
Sbjct: 361  246

Query: 476  535
           
Sbjct: 421  246

Query: 536  595
           
Sbjct: 481  246

Query: 596  655
           
Sbjct: 541  246

Query: 656  715
           
Sbjct: 601  246

Query: 716  775
           
Sbjct: 661  246

Query: 776  782
           
Sbjct: 721  246

[Close]

BLAST of CU122306 vs. NCBI nr
Match: gi|778674401|ref|XP_004138837.2| (PREDICTED: glutamate receptor 2.5-like [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 9.8e-90
Identity = 185/259 (71.43%), Postives = 208/259 (80.31%), Query Frame = 2


Query: 14  EKEEVQAIIGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 73
           +K EVQAIIGPTSSMQA+F+I+IGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV
Sbjct: 111 KKVEVQAIIGPTSSMQASFMIDIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQV 170

Query: 74  KAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIID 133
           KAIGAI+KTFKWRQVVPIYS+NEFG+GIIP LI+ALQEVDTDVPYQSKISP+A D+QI  
Sbjct: 171 KAIGAIIKTFKWRQVVPIYSNNEFGDGIIPDLINALQEVDTDVPYQSKISPTATDEQIGH 230

Query: 134 ELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGYVWIITDAIANLLDLIHPSVLK 193
           EL  LM M TRVFVVHM   HASRLF  AKEIGMMK GYVWIITDAI N LDLI PSVL+
Sbjct: 231 ELYKLMTMQTRVFVVHMLARHASRLFAKAKEIGMMKEGYVWIITDAIGNTLDLIEPSVLE 290

Query: 194 AMQGVVGIKTYVPRSKGLDSFKHDWRRDL*VIIQEERRDIRGRRV-GLWGMTQLGACI-A 253
           +MQGV+GI+T+VP++K L+ FK +WR+           DI    V GLW      A   A
Sbjct: 291 SMQGVLGIRTHVPKTKRLEGFKLEWRKRF-RRYYPTIEDIPDLNVFGLWAYDAAWALAKA 350

Query: 254 VEKLGRH-LRYS-STNITA 313
           VEK G H L+Y  +TNI+A
Sbjct: 351 VEKAGAHNLKYKPATNISA 368

Query: 314  373
           
Sbjct: 411  368

Query: 374  433
           
Sbjct: 471  368

Query: 434  493
           
Sbjct: 531  368

Query: 494  553
           
Sbjct: 591  368

Query: 554  613
           
Sbjct: 651  368

Query: 614  673
           
Sbjct: 711  368

Query: 674  733
           
Sbjct: 771  368

Query: 734  779
           
Sbjct: 831  368

The following BLAST results are available for this feature:

BLAST of CU122306 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GLR26_ARATH	1.1e-61	56.52	Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2 SV=2	[more]
GLR22_ARATH	7.3e-61	54.11	Glutamate receptor 2.2 OS=Arabidopsis thaliana GN=GLR2.2 PE=2 SV=1	[more]
GLR21_ARATH	2.1e-60	53.66	Glutamate receptor 2.1 OS=Arabidopsis thaliana GN=GLR2.1 PE=2 SV=2	[more]
GLR25_ARATH	4.7e-60	56.04	Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=2 SV=2	[more]
GLR23_ARATH	1.5e-58	53.40	Glutamate receptor 2.3 OS=Arabidopsis thaliana GN=GLR2.3 PE=2 SV=1	[more]

BLAST of CU122306 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQH2_CUCSA	1.6e-110	88.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383390 PE=3 SV=1	[more]
A0A0A0LSQ2_CUCSA	7.6e-89	71.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383920 PE=4 SV=1	[more]
A0A0A0LMA6_CUCSA	4.7e-83	65.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383370 PE=3 SV=1	[more]
A5AVQ8_VITVI	6.0e-70	55.98	Glutamate receptor OS=Vitis vinifera GN=VIT_04s0069g00060 PE=3 SV=1	[more]
B9HB97_POPTR	1.7e-69	55.98	Glutamate receptor OS=Populus trichocarpa GN=POPTR_0006s28420g PE=3 SV=2	[more]

BLAST of CU122306 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674395\|ref\|XP_011650201.1\|	1.0e-118	88.85	PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]	[more]
gi\|659089045\|ref\|XP_008445299.1\|	1.8e-112	84.62	PREDICTED: glutamate receptor 2.5-like isoform X2 [Cucumis melo]	[more]
gi\|659089041\|ref\|XP_008445296.1\|	1.8e-112	84.62	PREDICTED: glutamate receptor 2.5-like isoform X1 [Cucumis melo]	[more]
gi\|700207898\|gb\|KGN63017.1\|	2.0e-111	88.62	hypothetical protein Csa_2G383390 [Cucumis sativus]	[more]
gi\|778674401\|ref\|XP_004138837.2\|	9.8e-90	71.43	PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000337	GPCR_3
IPR001828	ANF_lig-bd_rcpt
IPR028082	Peripla_BP_I

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa2G383390	Csa2G383390	gene
Csa2G383380	Csa2G383380	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
ES882482	ES882482	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000337	GPCR, family 3	PRINTS	PR00248	GPCRMGR	coord: 80..97 score: 1.0E-6coord: 13..39 score: 1.0E-6coord: 64..80 score: 1.0E-6coord: 45..64 score: 1.
IPR001828	Receptor, ligand binding region	PFAM	PF01094	ANF_receptor	coord: 9..238 score: 1.0
IPR028082	Periplasmic binding protein-like I	unknown	SSF53822	Periplasmic binding protein-like I	coord: 7..238 score: 3.06
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 213..237 score: 5.2E-9coord: 7..62 score: 5.2E-9coord: 63..201 score: 5.7
None	No IPR available	PANTHER	PTHR18966	IONOTROPIC GLUTAMATE RECEPTOR	coord: 6..205 score: 2.3E
None	No IPR available	PANTHER	PTHR18966:SF204	GLUTAMATE RECEPTOR 2.5-RELATED	coord: 6..205 score: 2.3E