CU122273 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU122273
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 10845569 .. 10846069 (+)
Sequence length804
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

AGAAAGGAATATTCGTTCCATGGATGGATTTTTTTTATGAAGCAATAATAGATAGTATAGTAGTAACAAAACTTGGAGGTCCACCAGTCTACCGCGCCACGCCCTGGACCTTACCGGCGAAAGAGACATATACCAGACCAAGATGAAGAAGAAGAAGAAAAATAAGACAATTTTACCCCCTTTAATTTCCTTCCCTCAAATCTTCTGCAGTTTCTCCCCTTTCACCACCGGATTCGCCTTCGCGATCTGCTCCTTTCCCATCTGCTTGAAGTCAAATTCACACCCGTGTTGTTCCGGGTACCGGTGACTCCCACAATACACCATCCCACACCGGCACTTGAACCCCGTCAACCCCACGCGCCGCCTGCACGTCATACATCGGCTCGGCTGCTGTTGTTGTCTTTCCTCCGCCGCTGCCGTCCGAACCACTTCCGTCCTCACCTCCTCTTCCTCCTCCACGCGTTGTTCCTTCGCTTCCGGTTCCGGATTTAACAACAACGACGCCGCCCGGGTTTGGTTTAAGGCGAGTTTAGCGGTGGAGGATTGGTGGTCCTTCCACTGCCGATCGTCGGTAACCTTTTGGACAGAATTAATACAGAGGCGGGGCAGCCTAAGTACTCGCATTTGGTTGCTCGATGGTAGGGGGGCTGGCATTCTAGTATGTAGACTAGCCTAGCGTCAGACCGAGTTCCCTCTCACGCCCTAGTCCTGGAGCTAGTTGATAGGCATCGAGCAGCGGTGGTGATGCTGGGAGGTGATTTTTGCATCTCATCGTCACCAACAGACAGAACAAGAAGTAGAATC
Library
Library categoryESTs
other1
Homology
[Close]
BLAST of CU122273 vs. Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-22
Identity = 61/149 (40.94%), Postives = 74/149 (49.66%), Query Frame = -1 

Query: 223 LRLPRLCINSV------------QKVTDDRQWKDHQSSTAKLALNQTRAA------SLLL 282
           L+ PRLC N+              K   D Q ++  SSTAK AL Q+ AA      S + 
Sbjct: 7   LQEPRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAAASSSVS 66

Query: 283 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRCMTCRRRVGLTGFKCRCGMVYCG 342
                                             P RC+TCRRRVG+TGF+CRCG V+CG
Sbjct: 67  PPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCG 126

Query: 343 SHRYPEQHGCEFDFKQMGKEQIAKANPVV 402
           +HRY EQH C FDFK+MGK++IAKANP+V
Sbjct: 127 THRYAEQHECSFDFKRMGKDKIAKANPIV 155

Query: 403  462
           
Sbjct: 187  155

Query: 463  522
           
Sbjct: 247  155

Query: 523  582
           
Sbjct: 307  155

Query: 583  616
           
Sbjct: 367  155

[Close]
BLAST of CU122273 vs. Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 2.9e-20
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = -1 

Query: 223 PSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKEQIAKANPVV 282
           P+RC TCR+RVGLTGFKCRCG ++CG HRYPE HGC +DFK  G+E+IAKANP+V
Sbjct: 108 PNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLV 162

Query: 283  342
           
Sbjct: 168  162

Query: 343  388
           
Sbjct: 228  162

[Close]
BLAST of CU122273 vs. Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.5e-20
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = -1 

Query: 223 PSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKEQIAKANPVV 282
           P+RC  CR+RVGLTGF CRCG  +CGSHRYPE HGC FDFK  G+E+IAKANP+V
Sbjct: 99  PNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLV 153

Query: 283  342
           
Sbjct: 159  153

Query: 343  388
           
Sbjct: 219  153

[Close]
BLAST of CU122273 vs. Swiss-Prot
Match: SAP14_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica GN=SAP14 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-17
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = -1 

Query: 223 SRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKEQIAKANPVV 282
           +RC TCRR+VGLTGFKCRCG  +CG HRY ++HGC FD+K  G+E IAK NPVV
Sbjct: 175 NRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVV 228

Query: 283  342
           
Sbjct: 235  228

Query: 343  385
           
Sbjct: 295  228

[Close]
BLAST of CU122273 vs. Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-17
Identity = 35/54 (64.81%), Postives = 44/54 (81.48%), Query Frame = -1 

Query: 223 SRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKEQIAKANPVV 282
           +RC++C ++VG+TGFKCRCG  +CG+HRYPE H C+FDFK + +E IAKANPVV
Sbjct: 107 TRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVV 160

Query: 283  342
           
Sbjct: 167  160

Query: 343  385
           
Sbjct: 227  160

[Close]
BLAST of CU122273 vs. TrEMBL
Match: B9SCR6_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1280190 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.4e-23
Identity = 66/154 (42.86%), Postives = 79/154 (51.30%), Query Frame = -1 

Query: 223 RLCINSV------------QKVTDDRQWKDHQSSTAKLALNQT---------------RA 282
           RLC+N+              K   D Q K+ QSS AKLA +QT                A
Sbjct: 11  RLCVNNCGFFGSPATQNLCSKCHRDLQLKEQQSSNAKLAFSQTLSASSSSSSSSSSSPSA 70

Query: 283 ASLLLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRCMTCRRRVGLTGFKCRCG 342
           AS+ ++                                 P+RC+TCR+RVGLTGFKCRC 
Sbjct: 71  ASVSISISSPPIVDLPEVSSKAEVVVEDKEETAAETVVRPNRCLTCRKRVGLTGFKCRCE 130

Query: 343 MVYCGSHRYPEQHGCEFDFKQMGKEQIAKANPVV 402
           MV+CG+HRYPEQHGC FDFK MGK+QIAKANPVV
Sbjct: 131 MVFCGTHRYPEQHGCTFDFKAMGKKQIAKANPVV 164

Query: 403  462
           
Sbjct: 191  164

Query: 463  522
           
Sbjct: 251  164

Query: 523  582
           
Sbjct: 311  164

Query: 583  604
           
Sbjct: 371  164

[Close]
BLAST of CU122273 vs. TrEMBL
Match: B9H1R6_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0004s19500g PE=4 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 9.7e-23
Identity = 48/55 (87.27%), Postives = 53/55 (96.36%), Query Frame = -1 

Query: 223 PSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKEQIAKANPVV 282
           PSRC+TCRRRVGLTGFKCRCGMV+CG+HRYPEQH CEFDFK +GK+QIAKANPVV
Sbjct: 104 PSRCLTCRRRVGLTGFKCRCGMVFCGTHRYPEQHDCEFDFKSLGKQQIAKANPVV 158

Query: 283  342
           
Sbjct: 164  158

Query: 343  388
           
Sbjct: 224  158

[Close]
BLAST of CU122273 vs. TrEMBL
Match: A0A0D2VIP9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G258400 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-22
Identity = 62/140 (44.29%), Postives = 75/140 (53.57%), Query Frame = -1 

Query: 223 PRLCINSV------------QKVTDDRQWKDHQSSTAKLALNQTRAASLLLNXXXXXXXX 282
           P+LC N+              K   D Q K H+SS+AK A+NQT   SL           
Sbjct: 10  PKLCANNCGLIGSPATQNLCSKCHRDLQLKQHRSSSAKHAVNQTSIPSL---SSFPSVSS 69

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXPSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHG 342
                                    P RC++C +RVGLTGFKCRCGMV+CG HRYPE+HG
Sbjct: 70  SSSADKDAGSVAETKAAEVVEVEVRPKRCLSCNKRVGLTGFKCRCGMVFCGIHRYPEEHG 129

Query: 343 CEFDFKQMGKEQIAKANPVV 402
           C+FDFK MGK+QIA+ANPVV
Sbjct: 130 CKFDFKAMGKQQIAQANPVV 146

Query: 403  462
           
Sbjct: 190  146

Query: 463  522
           
Sbjct: 250  146

Query: 523  582
           
Sbjct: 310  146

Query: 583  607
           
Sbjct: 370  146

[Close]
BLAST of CU122273 vs. TrEMBL
Match: B9HQW9_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0009s14630g PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.7e-22
Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = -1 

Query: 223 PSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKEQIAKANPVV 282
           P+RC+TCRRRVGLTGF CRCGMV+CG+HRYPEQH CEFDFK +GKEQIAKANPVV
Sbjct: 97  PNRCLTCRRRVGLTGFNCRCGMVFCGTHRYPEQHDCEFDFKSLGKEQIAKANPVV 151

Query: 283  342
           
Sbjct: 157  151

Query: 343  388
           
Sbjct: 217  151

[Close]
BLAST of CU122273 vs. TrEMBL
Match: W9QJ81_9ROSA (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Morus notabilis GN=L484_022365 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.2e-22
Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = -1 

Query: 223 PSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKEQIAKANPVV 282
           P RC TCRRRVGLTGFKCRCGM++CGSHRYPEQHGC FDFK MGK+QIAKANPVV
Sbjct: 99  PRRCGTCRRRVGLTGFKCRCGMMFCGSHRYPEQHGCTFDFKGMGKDQIAKANPVV 153

Query: 283  342
           
Sbjct: 159  153

Query: 343  388
           
Sbjct: 219  153

[Close]
BLAST of CU122273 vs. NCBI nr
Match: gi|449463078|ref|XP_004149261.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 82/140 (58.57%), Postives = 85/140 (60.71%), Query Frame = -1 

Query: 223 PRLCINSV------------QKVTDDRQWKDHQSSTAKLALNQTRAASLLLNXXXXXXXX 282
           P+LC N+              K   D Q K+ QSSTAKLALNQT AASLLLN        
Sbjct: 10  PKLCANNCGFFGSPATRDFCSKCYRDLQLKEQQSSTAKLALNQTLAASLLLNPEPEAKEQ 69

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXPSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHG 342
                                    PSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHG
Sbjct: 70  RVEEEEEVRTEVVRTAAAEERQQQQPSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHG 129

Query: 343 CEFDFKQMGKEQIAKANPVV 402
           CEFDFKQMGKEQIAKANPVV
Sbjct: 130 CEFDFKQMGKEQIAKANPVV 149

Query: 403  462
           
Sbjct: 190  149

Query: 463  522
           
Sbjct: 250  149

Query: 523  582
           
Sbjct: 310  149

Query: 583  607
           
Sbjct: 370  149

[Close]
BLAST of CU122273 vs. NCBI nr
Match: gi|659117390|ref|XP_008458577.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 2.0e-29
Identity = 80/148 (54.05%), Postives = 85/148 (57.43%), Query Frame = -1 

Query: 223 PRLCINSV------------QKVTDDRQWKDHQSSTAKLALNQTRAAS-------LLLNX 282
           P+LC N+              K   D Q K+ QSS+AKLALNQT AAS       LLLN 
Sbjct: 10  PKLCANNCGFFGSPATRDLCSKCYRDLQLKEQQSSSAKLALNQTLAASSSSSSSSLLLNL 69

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PSRCMTCRRRVGLTGFKCRCGMVYCGS 342
                                            PSRCMTCRRRVGLTGFKCRCGMVYCGS
Sbjct: 70  KPEAKEQRVEEEVRTEVVRTEAAEARQQQQQQQPSRCMTCRRRVGLTGFKCRCGMVYCGS 129

Query: 343 HRYPEQHGCEFDFKQMGKEQIAKANPVV 402
           HRYPEQHGCEFDFKQMGK+QIAKANPVV
Sbjct: 130 HRYPEQHGCEFDFKQMGKDQIAKANPVV 157

Query: 403  462
           
Sbjct: 190  157

Query: 463  522
           
Sbjct: 250  157

Query: 523  582
           
Sbjct: 310  157

Query: 583  607
           
Sbjct: 370  157

[Close]
BLAST of CU122273 vs. NCBI nr
Match: gi|568869513|ref|XP_006487967.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Citrus sinensis])

HSP 1 Score: 118.2 bits (295), Expect = 2.1e-23
Identity = 66/140 (47.14%), Postives = 77/140 (55.00%), Query Frame = -1 

Query: 223 PRLCINSV------------QKVTDDRQWKDHQSSTAKLALNQTRAASLLLNXXXXXXXX 282
           PRLC+N+              K   D Q K  QSS+AK ALNQT  +S  ++        
Sbjct: 10  PRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPA 69

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXPSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHG 342
                                     +RCMTCRRRVGLTGFKCRCG V+CG+HRYPEQH 
Sbjct: 70  TDVEVAAEAEKPPAEVAAPVQSTAA-NRCMTCRRRVGLTGFKCRCGSVFCGTHRYPEQHA 129

Query: 343 CEFDFKQMGKEQIAKANPVV 402
           C FDFK+MGKEQIA+ANPVV
Sbjct: 130 CSFDFKEMGKEQIARANPVV 148

Query: 403  462
           
Sbjct: 190  148

Query: 463  522
           
Sbjct: 250  148

Query: 523  582
           
Sbjct: 310  148

Query: 583  607
           
Sbjct: 370  148

[Close]
BLAST of CU122273 vs. NCBI nr
Match: gi|729348434|ref|XP_010542567.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3-like [Tarenaya hassleriana])

HSP 1 Score: 117.5 bits (293), Expect = 3.7e-23
Identity = 67/144 (46.53%), Postives = 75/144 (52.08%), Query Frame = -1 

Query: 223 PRLCINSV------------QKVTDDRQWKDHQSSTAKLALNQTRAASLLL----NXXXX 282
           PRLC N+              K   D Q+K   SS+AK ALNQT A++       +    
Sbjct: 10  PRLCANNCGFFGSPATQNLCSKCFRDLQFKQQNSSSAKHALNQTLASASSSAASPSSILA 69

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRCMTCRRRVGLTGFKCRCGMVYCGSHRYP 342
                                        P+RC TCRRRVGLTGFKCRCG VYCGSHRYP
Sbjct: 70  IDAKEPGVDQSKPEEPAAMAQPQPQPPQDPNRCSTCRRRVGLTGFKCRCGFVYCGSHRYP 129

Query: 343 EQHGCEFDFKQMGKEQIAKANPVV 402
           EQH C FDFK MGKEQIAKANP+V
Sbjct: 130 EQHHCSFDFKGMGKEQIAKANPIV 153

Query: 403  462
           
Sbjct: 190  153

Query: 463  522
           
Sbjct: 250  153

Query: 523  582
           
Sbjct: 310  153

Query: 583  607
           
Sbjct: 370  153

[Close]
BLAST of CU122273 vs. NCBI nr
Match: gi|702474101|ref|XP_010031502.1| (PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3-like [Eucalyptus grandis])

HSP 1 Score: 116.7 bits (291), Expect = 6.2e-23
Identity = 60/123 (48.78%), Postives = 68/123 (55.28%), Query Frame = -1 

Query: 223 NSVQKVTDDRQWKDHQSSTAKLALNQTRAASLLLNXXXXXXXXXXXXXXXXXXXXXXXXX 282
           N   K   D Q K+H+SS AKLALNQ+ A +                             
Sbjct: 28  NLCSKCYRDLQLKEHRSSDAKLALNQSLAPASAPAAAPSPQPAAISTAPSAAPSPPAEEG 87

Query: 283 XXXXXXXXPSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKEQIAKAN 342
                   P RC  CRRRVGLTGFKCRCG+ +CGSHRYPEQH C FDFK MG+EQIA+AN
Sbjct: 88  REDAAPAGPGRCAACRRRVGLTGFKCRCGVTFCGSHRYPEQHACGFDFKAMGREQIARAN 147

Query: 343 PVV 402
           PVV
Sbjct: 148 PVV 150

Query: 403  462
           
Sbjct: 208  150

Query: 463  522
           
Sbjct: 268  150

Query: 523  582
           
Sbjct: 328  150

Query: 583  592
           
Sbjct: 388  150

The following BLAST results are available for this feature:
BLAST of CU122273 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SAP3_ARATH3.1e-2240.94Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabido... [more]
SAP6_ARATH2.9e-2072.73Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabido... [more]
SAP4_ARATH6.5e-2072.73Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabido... [more]
SAP14_ORYSJ1.0e-1768.52Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa s... [more]
SAP1_ARATH1.3e-1764.81Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabido... [more]
BLAST of CU122273 vs. TrEMBL
Match NameE-valueIdentityDescription
B9SCR6_RICCO7.4e-2342.86Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1280190 PE=4 SV=1[more]
B9H1R6_POPTR9.7e-2387.27Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0004s19500g PE=4 SV=2[more]
A0A0D2VIP9_GOSRA1.7e-2244.29Uncharacterized protein OS=Gossypium raimondii GN=B456_013G258400 PE=4 SV=1[more]
B9HQW9_POPTR3.7e-2285.45Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0009s14630g PE=4 SV=1[more]
W9QJ81_9ROSA8.2e-2287.27Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Morus n... [more]
BLAST of CU122273 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449463078|ref|XP_004149261.1|1.0e-3358.57PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3... [more]
gi|659117390|ref|XP_008458577.1|2.0e-2954.05PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3... [more]
gi|568869513|ref|XP_006487967.1|2.1e-2347.14PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3... [more]
gi|729348434|ref|XP_010542567.1|3.7e-2346.53PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3... [more]
gi|702474101|ref|XP_010031502.1|6.2e-2348.78PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3... [more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR000058Znf_AN1
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G152950Csa6G152950gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
ES882394ES882394EST


InterPro
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000058Zinc finger, AN1-typeGENE3DG3DSA:4.10.1110.10coord: 116..187
score: 2.8
IPR000058Zinc finger, AN1-typePFAMPF01428zf-AN1coord: 132..168
score: 1.5
IPR000058Zinc finger, AN1-typeSMARTSM00154AN1_Zf_4coord: 132..169
score: 6.0
IPR000058Zinc finger, AN1-typePROFILEPS51039ZF_AN1coord: 129..172
score: 12
NoneNo IPR availablePANTHERPTHR10634AN1-TYPE ZINC FINGER PROTEINcoord: 76..191
score: 3.1
NoneNo IPR availablePANTHERPTHR10634:SF5PROTEIN F22D6.2coord: 76..191
score: 3.1
NoneNo IPR availableunknownSSF118310AN1-like Zinc fingercoord: 119..186
score: 1.96