CU122052 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU122052
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 6196979 .. 6197388 (-)
Sequence length414
The following sequences are available for this feature:

transcribed_cluster sequence

AACTGAACATTATCCGTTGACTTATTATAATAAATTACAACAATCCACAACCATATAATATATAACATACATGCATAACAAGTTAATTTGATGTAAAATAAAATAAGCAACACACTTCTTCAAATTATCAATCTTAAAAATAAATTTGATCCATTTGCTGCCCACCAAGAAACGGCATTTTTAATTAGTAGCTTCGTCGTCTCCATATAATCATTCTCCTCAGACCAATTGTAAGAAAGGCAATTGTTTGGAGTATGTTATAATTGACACGATCCACAACTCGAAAGTAGAATATTCTCCTTGCTTCATTTGTGAAAATGGTAAAGAACAGTATGTTGATGCCAAATGGAAAACCAATTGCCATACTAATATAGAAGCCAGCCATTTCCGAGTCATTTTCAGCTTTGCCATCTT
Library categoryESTs
fruit (8DPP) library5
BLAST of CU122052 vs. TrEMBL
Match: A0A0A0LWU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051880 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.7e-27
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = -3

Query: 197 ENDSEMAGFYISMAIGFPFGINILFFTIFTNEARRIFYFRVVDRVNYNILQTIAFLTIGL 256
           ENDSEM GFYISMAIGFPFGINILFFTI TNEARR+FYFRVVDRVN NILQTIAFL IGL
Sbjct: 817 ENDSEMVGFYISMAIGFPFGINILFFTISTNEARRLFYFRVVDRVNCNILQTIAFLAIGL 876

Query: 257 RRMIIWRR 316
           RRMIIWRR
Sbjct: 877 RRMIIWRR 884

Query: 317 376
           
Sbjct: 937 884

Query: 377 401
           
Sbjct: 997 884

BLAST of CU122052 vs. TrEMBL
Match: A0A0A0LTZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051860 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-26
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = -3

Query: 197  DGKAENDSEMAGFYISMAIGFPFGINILFFTIFTNEARRIFYFRVVDRVNYNILQTIAFL 256
            DGK ENDS M GFYISMA+GFPFGI+IL FTI TNEARRIFYF +VDRVNYNILQTIAFL
Sbjct: 970  DGK-ENDSAMVGFYISMAVGFPFGISILLFTICTNEARRIFYFGIVDRVNYNILQTIAFL 1029

Query: 257  TIGLRRMIIWRR 316
            TIGLRRMIIWRR
Sbjct: 1030 TIGLRRMIIWRR 1040

Query: 317  376
            
Sbjct: 1090 1040

Query: 377  413
            
Sbjct: 1150 1040

BLAST of CU122052 vs. TrEMBL
Match: A0A0A0LBE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G812120 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.6e-13
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = -3

Query: 212 DGKAENDSEMAGF--YISMAIGFPFGINILFFTIFTNEARRIFYFRVVDRVNYNILQTIA 271
           DGK EN+ E  GF  Y+SM IGFP G+NILFFTIFT+ +RRI Y R +DRVN NIL+ I 
Sbjct: 736 DGK-ENEMEFFGFAFYVSMGIGFPIGLNILFFTIFTSRSRRILYIRFIDRVNDNILEGIG 795

Query: 272 FLTIGLRRM 331
           F+   +RRM
Sbjct: 796 FVITSMRRM 803

Query: 332 391
           
Sbjct: 856 803

Query: 392 413
           
Sbjct: 916 803

BLAST of CU122052 vs. TrEMBL
Match: A0A0A0LRA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051870 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = -3

Query: 188 RIFYFRVVDRVNYNILQTIAFLTIGLRRMIIWRRRSY 247
           RIFYFRVVDRVNYNILQTIAFLTIGLRRMIIWRRRSY
Sbjct: 781 RIFYFRVVDRVNYNILQTIAFLTIGLRRMIIWRRRSY 817

Query: 248 299
           
Sbjct: 841 817

BLAST of CU122052 vs. NCBI nr
Match: gi|778658237|ref|XP_011652343.1| (PREDICTED: receptor-like protein 12 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-27
Identity = 66/72 (91.67%), Postives = 67/72 (93.06%), Query Frame = -3

Query: 197  DGKAENDSEMAGFYISMAIGFPFGINILFFTIFTNEARRIFYFRVVDRVNYNILQTIAFL 256
            D KAENDSEM GFYISMAIGFPFGINILFFTI TNEARR+FYFRVVDRVN NILQTIAFL
Sbjct: 977  DDKAENDSEMVGFYISMAIGFPFGINILFFTISTNEARRLFYFRVVDRVNCNILQTIAFL 1036

Query: 257  TIGLRRMIIWRR 316
             IGLRRMIIWRR
Sbjct: 1037 AIGLRRMIIWRR 1048

Query: 317  376
            
Sbjct: 1097 1048

Query: 377  413
            
Sbjct: 1157 1048

BLAST of CU122052 vs. NCBI nr
Match: gi|700209355|gb|KGN64451.1| (hypothetical protein Csa_1G051880 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 6.9e-26
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = -3

Query: 197 ENDSEMAGFYISMAIGFPFGINILFFTIFTNEARRIFYFRVVDRVNYNILQTIAFLTIGL 256
           ENDSEM GFYISMAIGFPFGINILFFTI TNEARR+FYFRVVDRVN NILQTIAFL IGL
Sbjct: 817 ENDSEMVGFYISMAIGFPFGINILFFTISTNEARRLFYFRVVDRVNCNILQTIAFLAIGL 876

Query: 257 RRMIIWRR 316
           RRMIIWRR
Sbjct: 877 RRMIIWRR 884

Query: 317 376
           
Sbjct: 937 884

Query: 377 401
           
Sbjct: 997 884

BLAST of CU122052 vs. NCBI nr
Match: gi|659067587|ref|XP_008440232.1| (PREDICTED: leucine-rich repeat receptor protein kinase EXS-like, partial [Cucumis melo])

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-25
Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = -3

Query: 197  ENDSEMAGFYISMAIGFPFGINILFFTIFTNEARRIFYFRVVDRVNYNILQTIAFLTIGL 256
            EN SEM GFYISMAIGFPFGINILFFTIFTN+ARRIFY R+VDRVNYNILQTI FL IGL
Sbjct: 975  ENGSEMVGFYISMAIGFPFGINILFFTIFTNQARRIFYLRIVDRVNYNILQTIVFLIIGL 1034

Query: 257  RRMIIWRR 316
            RRMIIWRR
Sbjct: 1035 RRMIIWRR 1042

Query: 317  376
            
Sbjct: 1095 1042

Query: 377  401
            
Sbjct: 1155 1042

BLAST of CU122052 vs. NCBI nr
Match: gi|778658234|ref|XP_011652339.1| (PREDICTED: LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinase FLS2 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-25
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = -3

Query: 197  DGKAENDSEMAGFYISMAIGFPFGINILFFTIFTNEARRIFYFRVVDRVNYNILQTIAFL 256
            DGK ENDS M GFYISMA+GFPFGI+IL FTI TNEARRIFYF +VDRVNYNILQTIAFL
Sbjct: 993  DGK-ENDSAMVGFYISMAVGFPFGISILLFTICTNEARRIFYFGIVDRVNYNILQTIAFL 1052

Query: 257  TIGLRRMIIWRR 316
            TIGLRRMIIWRR
Sbjct: 1053 TIGLRRMIIWRR 1063

Query: 317  376
            
Sbjct: 1113 1063

Query: 377  413
            
Sbjct: 1173 1063

BLAST of CU122052 vs. NCBI nr
Match: gi|700209353|gb|KGN64449.1| (hypothetical protein Csa_1G051860 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-25
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = -3

Query: 197  DGKAENDSEMAGFYISMAIGFPFGINILFFTIFTNEARRIFYFRVVDRVNYNILQTIAFL 256
            DGK ENDS M GFYISMA+GFPFGI+IL FTI TNEARRIFYF +VDRVNYNILQTIAFL
Sbjct: 970  DGK-ENDSAMVGFYISMAVGFPFGISILLFTICTNEARRIFYFGIVDRVNYNILQTIAFL 1029

Query: 257  TIGLRRMIIWRR 316
            TIGLRRMIIWRR
Sbjct: 1030 TIGLRRMIIWRR 1040

Query: 317  376
            
Sbjct: 1090 1040

Query: 377  413
            
Sbjct: 1150 1040

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LWU0_CUCSA5.7e-2792.65Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051880 PE=4 SV=1[more]
A0A0A0LTZ3_CUCSA2.2e-2687.50Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051860 PE=4 SV=1[more]
A0A0A0LBE5_CUCSA3.6e-1360.87Uncharacterized protein OS=Cucumis sativus GN=Csa_3G812120 PE=4 SV=1[more]
A0A0A0LRA2_CUCSA1.1e-11100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051870 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778658237|ref|XP_011652343.1|1.6e-2791.67PREDICTED: receptor-like protein 12 [Cucumis sativus][more]
gi|700209355|gb|KGN64451.1|6.9e-2692.65hypothetical protein Csa_1G051880 [Cucumis sativus][more]
gi|659067587|ref|XP_008440232.1|1.5e-2589.71PREDICTED: leucine-rich repeat receptor protein kinase EXS-like, partial [Cucumi... [more]
gi|778658234|ref|XP_011652339.1|2.6e-2587.50PREDICTED: LOW QUALITY PROTEIN: LRR receptor-like serine/threonine-protein kinas... [more]
gi|700209353|gb|KGN64449.1|2.6e-2587.50hypothetical protein Csa_1G051860 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G051870Csa1G051870gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02K4B4TFKNP3UI02K4B4TEST
FKNP3UI02KUF0RFKNP3UI02KUF0REST
FKNP3UI02MIUXVFKNP3UI02MIUXVEST
FKNP3UI02NFMIDFKNP3UI02NFMIDEST
FKNP3UI02OBGL2FKNP3UI02OBGL2EST