CU121976 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU121976
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 6510401 .. 6512980 (-)
Sequence length526
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

ACTAAAAATAGTTTCAAACACTTTTATTTTTTTAACTCAAACGTGGCATAGTTGTGTAATTGAAGATTTTACCAGTAAGTTTTATTATACTAATAGATGTCTTATTCATTAACACTAACTACAAACTCTTTGTAAATGATAGATAAGCAAAGTTACGATCGTGCTCCAAGATCGGCTTAGGAGATATTATCCAGAAGGTGAGAGAGAGGGGAAGAAAAACAAGCGACTTGGTAATATGATATTTAATCTGATTGATCAATCTCTGTAAAACATCTCACGTGGAACTGTTATACATAGTGCAGTATGGACTTCTTTAGGTTGTTTTCATCTCAAAGATCCATGTGTACCTCAAAATGGCAACGTTCAACTCCTAGTTGCAAACAATGTCAGAGTAAAAGCCTATTGTCCTCCTCTGACAATCTTGGACGCTTAACAGTTCCACATCAAAGACTTCAAACTGTTTTGAGCTGAAAAATGTGGAAGGCCCCACAGGAGGTCCAAGTTCTGGTGGGATTATCATTCTCCT
Homology
[Close]
BLAST of CU121976 vs. Swiss-Prot
Match: FK202_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP20-2 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.0e-19
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRT-IGFYSDIVCN 433
           RR+IIPPELGPPVGPSTFFSSKQFEVFDVELLS+Q+C+RRT IGFYSD+ C+
Sbjct: 191 RRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSDVTCS 242

Query: 434  493
           
Sbjct: 251  242

Query: 494  527
           
Sbjct: 311  242

[Close]
BLAST of CU121976 vs. TrEMBL
Match: A0A0A0L5Q7_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_3G118090 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.7e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 433
           RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN
Sbjct: 210 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 260

Query: 434  493
           
Sbjct: 270  260

Query: 494  527
           
Sbjct: 330  260

[Close]
BLAST of CU121976 vs. TrEMBL
Match: A0A067HCN2_CITSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g025317mg PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.6e-20
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 433
           RR+IIPPELGPPVGPSTFFS+KQFEVFDVELLSVQDCQRRTIGFYSD+VCN
Sbjct: 105 RRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQDCQRRTIGFYSDVVCN 155

Query: 434  493
           
Sbjct: 165  155

Query: 494  527
           
Sbjct: 225  155

[Close]
BLAST of CU121976 vs. TrEMBL
Match: A0A022QZE0_ERYGU (Peptidyl-prolyl cis-trans isomerase OS=Erythranthe guttata GN=MIMGU_mgv1a012536mg PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.6e-20
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 433
           RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLS+QDC RRTIGFYSD+VCN
Sbjct: 197 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQDCTRRTIGFYSDVVCN 247

Query: 434  493
           
Sbjct: 257  247

Query: 494  527
           
Sbjct: 317  247

[Close]
BLAST of CU121976 vs. TrEMBL
Match: A0A067H3P5_CITSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g025317mg PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.6e-20
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 433
           RR+IIPPELGPPVGPSTFFS+KQFEVFDVELLSVQDCQRRTIGFYSD+VCN
Sbjct: 204 RRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQDCQRRTIGFYSDVVCN 254

Query: 434  493
           
Sbjct: 264  254

Query: 494  527
           
Sbjct: 324  254

[Close]
BLAST of CU121976 vs. TrEMBL
Match: V4U8Y4_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10021814mg PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.6e-20
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 433
           RR+IIPPELGPPVGPSTFFS+KQFEVFDVELLSVQDCQRRTIGFYSD+VCN
Sbjct: 204 RRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQDCQRRTIGFYSDVVCN 254

Query: 434  493
           
Sbjct: 264  254

Query: 494  527
           
Sbjct: 324  254

[Close]
BLAST of CU121976 vs. NCBI nr
Match: gi|449431986|ref|XP_004133781.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 433
           RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN
Sbjct: 210 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 260

Query: 434  493
           
Sbjct: 270  260

Query: 494  527
           
Sbjct: 330  260

[Close]
BLAST of CU121976 vs. NCBI nr
Match: gi|641866861|gb|KDO85545.1| (hypothetical protein CISIN_1g025317mg [Citrus sinensis])

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 433
           RR+IIPPELGPPVGPSTFFS+KQFEVFDVELLSVQDCQRRTIGFYSD+VCN
Sbjct: 204 RRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQDCQRRTIGFYSDVVCN 254

Query: 434  493
           
Sbjct: 264  254

Query: 494  527
           
Sbjct: 324  254

[Close]
BLAST of CU121976 vs. NCBI nr
Match: gi|848886573|ref|XP_012843529.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Erythranthe guttata])

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 433
           RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLS+QDC RRTIGFYSD+VCN
Sbjct: 197 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQDCTRRTIGFYSDVVCN 247

Query: 434  493
           
Sbjct: 257  247

Query: 494  527
           
Sbjct: 317  247

[Close]
BLAST of CU121976 vs. NCBI nr
Match: gi|848886576|ref|XP_012843530.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X2 [Erythranthe guttata])

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 433
           RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLS+QDC RRTIGFYSD+VCN
Sbjct: 191 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQDCTRRTIGFYSDVVCN 241

Query: 434  493
           
Sbjct: 251  241

Query: 494  527
           
Sbjct: 311  241

[Close]
BLAST of CU121976 vs. NCBI nr
Match: gi|567905826|ref|XP_006445401.1| (hypothetical protein CICLE_v10021814mg [Citrus clementina])

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = -1 

Query: 374 RRMIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQDCQRRTIGFYSDIVCN 433
           RR+IIPPELGPPVGPSTFFS+KQFEVFDVELLSVQDCQRRTIGFYSD+VCN
Sbjct: 204 RRIIIPPELGPPVGPSTFFSAKQFEVFDVELLSVQDCQRRTIGFYSDVVCN 254

Query: 434  493
           
Sbjct: 264  254

Query: 494  527
           
Sbjct: 324  254

The following BLAST results are available for this feature:
BLAST of CU121976 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FK202_ARATH8.0e-1984.62Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thali... [more]
BLAST of CU121976 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5Q7_CUCSA7.7e-21100.00Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_3G118090 PE=4 SV=1[more]
A0A067HCN2_CITSI6.6e-2094.12Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g025317mg PE=4 ... [more]
A0A022QZE0_ERYGU6.6e-2094.12Peptidyl-prolyl cis-trans isomerase OS=Erythranthe guttata GN=MIMGU_mgv1a012536m... [more]
A0A067H3P5_CITSI6.6e-2094.12Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g025317mg PE=4 ... [more]
V4U8Y4_9ROSI6.6e-2094.12Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10021814mg PE... [more]
BLAST of CU121976 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449431986|ref|XP_004133781.1|2.2e-21100.00PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis ... [more]
gi|641866861|gb|KDO85545.1|1.9e-2094.12hypothetical protein CISIN_1g025317mg [Citrus sinensis][more]
gi|848886573|ref|XP_012843529.1|1.9e-2094.12PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X... [more]
gi|848886576|ref|XP_012843530.1|1.9e-2094.12PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X... [more]
gi|567905826|ref|XP_006445401.1|1.9e-2094.12hypothetical protein CICLE_v10021814mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR023566PPIase_FKBP
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G118090Csa3G118090gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02L4ME5FKNP3UI02L4ME5EST
FKNP3UI02L7IJ2FKNP3UI02L7IJ2EST
FKNP3UI02NE20JFKNP3UI02NE20JEST
FKNP3UI02NS79UFKNP3UI02NS79UEST
G0068050G0068050EST
G0151772G0151772EST
H0011598H0011598EST
H0031217H0031217EST
H0149638H0149638EST


InterPro
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023566Peptidyl-prolyl cis-trans isomerase, FKBP-typePANTHERPTHR10516PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 1..51
score: 5.8
NoneNo IPR availablePANTHERPTHR10516:SF178PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTICcoord: 1..51
score: 5.8