CU121531 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU121531
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 7827967 .. 7828249 (+)
Sequence length299
The following sequences are available for this feature:

transcribed_cluster sequence

GTGGTAGTACAGGTGAACTTTGTGGTGGTGGAATGGTTGGACTTGTTGATGGTGCAACAACAGTAGGTGGTGGTGTTGACAATGGTGGAGAAGTCGCTACAGTTGGAGGTGGGGTAGTAGGGGGAGGAGAGACGGTTGGCAAGCTCGGTGGCTGTGCTGGGGCCTGAGCGAACGAGGAAGAGAATAGAAAGGCAAGGCAGATGACAAAAAATGACCATGATTTGGAAGCCATGGTTGGAGATGGGAAATAAGAGAAGGAAATGGCATGAGTCATTTATTGAACGAATGTTCCCCGGCCG
BLAST of CU121531 vs. TrEMBL
Match: A0A0A0LHJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G115750 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.3e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = -2

Query: 161 MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQA 220
           MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQA
Sbjct: 1   MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQA 38

Query: 221 275
           
Sbjct: 61  38

BLAST of CU121531 vs. NCBI nr
Match: gi|700206281|gb|KGN61400.1| (hypothetical protein Csa_2G115750 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 9.1e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = -2

Query: 161 MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQA 220
           MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQA
Sbjct: 1   MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQA 38

Query: 221 275
           
Sbjct: 61  38

BLAST of CU121531 vs. NCBI nr
Match: gi|659114696|ref|XP_008457186.1| (PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo])

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-08
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = -2

Query: 161 MTHAISFSYFPSPTMASKSWSFFVICLAFLFSSSFAQA 220
           MTH ISFSYFPSPTMASK WSF VICLAFLFSS+ AQA
Sbjct: 1   MTHTISFSYFPSPTMASKLWSFSVICLAFLFSSAIAQA 38

Query: 221 275
           
Sbjct: 61  38

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LHJ4_CUCSA1.3e-12100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G115750 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700206281|gb|KGN61400.1|9.1e-12100.00hypothetical protein Csa_2G115750 [Cucumis sativus][more]
gi|659114696|ref|XP_008457186.1|1.2e-0886.84PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G115750Csa2G115750gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LRHJEFKNP3UI02LRHJEEST
G0021870G0021870EST