CU119716 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU119716
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	YELLOW STRIPE like 7
Location	Chr1 : 4767013 .. 4767347 (-)
Sequence length	338

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CTTGGCATTCTGTAATGCATATGGATGTGGACTCACGGATTGGTCTTTGGCATCCACTTACGGAAAGCTTGCCATTTTCACAATTGGCGCATGGGCTGGGCCCTCGCGTGGGGGAATTATTGCTGGTCTATCAGCTTGTGGGGTCATGATGAACATTGTCTCGACACGCCTCAGACCTTACGCAGGATTTCAAGACTGGCTATCTAACTTTAGCTTCACCTCGCTCCATGTTTGTCAGCCAAGTGGTAGGCACAACAATGGGTTGCATTATTTCCCCTTGTGTCTTTTGGCTCTTCTACAAGGCATTTGACGATCTTGGTCTTCCAACCGGTGAACCG

Library


Library category	ESTs
gynoecious flower library	2

Homology

[Close]

BLAST of CU119716 vs. Swiss-Prot
Match: YSL7_ARATH (Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana GN=YSL7 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 2


Query: 2   LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 61
           LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAG S GG++AGL+ACGVMMNIVST
Sbjct: 430 LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASNGGVLAGLAACGVMMNIVST 484

Query: 62   121
           
Sbjct: 490  484

Query: 122  167
           
Sbjct: 550  484

HSP 2 Score: 98.2 bits (243), Expect = 6.0e-20
Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 3


Query: 168 ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGLP 227
           ASDL QDFKTGY+TLASPRSMF+SQ +GT MGC+ISPCVFWLFYKAF D G P
Sbjct: 485 ASDLMQDFKTGYMTLASPRSMFLSQAIGTAMGCVISPCVFWLFYKAFPDFGQP 537

Query: 228  287
           
Sbjct: 545  537

Query: 288  327
           
Sbjct: 605  537

[Close]

BLAST of CU119716 vs. Swiss-Prot
Match: YSL8_ARATH (Probable metal-nicotianamine transporter YSL8 OS=Arabidopsis thaliana GN=YSL8 PE=1 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-23
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 3


Query: 168 ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGLPTGE 227
           ASDLTQDFKTGYLTL+SPR+MFVSQV+GT MGC++SPCVFWLFYKAFDDLGLP  E
Sbjct: 520 ASDLTQDFKTGYLTLSSPRAMFVSQVIGTAMGCLVSPCVFWLFYKAFDDLGLPNSE 575

Query: 228  287
           
Sbjct: 580  575

Query: 288  336
           
Sbjct: 640  575

HSP 2 Score: 105.1 bits (261), Expect = 4.9e-22
Identity = 48/55 (87.27%), Postives = 49/55 (89.09%), Query Frame = 2


Query: 2   LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 61
           LAFCNAYG GLTDWSLASTYGKLAIFTIGAWAG   GG++AGL+ACGVMMNIVST
Sbjct: 465 LAFCNAYGAGLTDWSLASTYGKLAIFTIGAWAGSDHGGLLAGLAACGVMMNIVST 519

Query: 62   121
           
Sbjct: 525  519

Query: 122  167
           
Sbjct: 585  519

[Close]

BLAST of CU119716 vs. Swiss-Prot
Match: YSL5_ARATH (Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana GN=YSL5 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-23
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 3


Query: 168 ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGLPTGE 227
           ASDLTQDFKTGYLTL+SP+SMFVSQV+GT MGC++SPCVFWLFYKAFDDLGLP  E
Sbjct: 510 ASDLTQDFKTGYLTLSSPKSMFVSQVIGTAMGCVVSPCVFWLFYKAFDDLGLPNTE 565

Query: 228  287
           
Sbjct: 570  565

Query: 288  336
           
Sbjct: 630  565

HSP 2 Score: 104.8 bits (260), Expect = 6.4e-22
Identity = 48/55 (87.27%), Postives = 49/55 (89.09%), Query Frame = 2


Query: 2   LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 61
           LAFCNAYG GLTDWSLASTYGKLAIFTIGAWAG   GG++AGL+ACGVMMNIVST
Sbjct: 455 LAFCNAYGAGLTDWSLASTYGKLAIFTIGAWAGSEHGGMLAGLAACGVMMNIVST 509

Query: 62   121
           
Sbjct: 515  509

Query: 122  167
           
Sbjct: 575  509

[Close]

BLAST of CU119716 vs. Swiss-Prot
Match: YSL10_ORYSJ (Probable metal-nicotianamine transporter YSL10 OS=Oryza sativa subsp. japonica GN=YSL10 PE=2 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-21
Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 2


Query: 2   LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 61
           LAFCNAYGCGLTDWSLA+TYGKLAIFT+GAWA  S GGIIAGL+ACGVM+ IVST
Sbjct: 425 LAFCNAYGCGLTDWSLATTYGKLAIFTVGAWADASDGGIIAGLAACGVMIGIVST 479

Query: 62   121
           
Sbjct: 485  479

Query: 122  167
           
Sbjct: 545  479

HSP 2 Score: 101.7 bits (252), Expect = 5.4e-21
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 3


Query: 168 ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGLPTGE 227
           ASDLTQDFKTGY+TLASPRSMFVSQV+GT MGC+I+P VFWLFYKAF D+G+P  E
Sbjct: 480 ASDLTQDFKTGYMTLASPRSMFVSQVIGTAMGCVIAPSVFWLFYKAFHDIGMPGSE 535

Query: 228  287
           
Sbjct: 540  535

Query: 288  336
           
Sbjct: 600  535

[Close]

BLAST of CU119716 vs. Swiss-Prot
Match: YSL12_ORYSJ (Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-20
Identity = 45/55 (81.82%), Postives = 47/55 (85.45%), Query Frame = 2


Query: 2   LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 61
           LAFCNAYG GLTDWSLASTYGKLAIF  GAWAG S GG++ GL+ACGVMM+IVST
Sbjct: 460 LAFCNAYGAGLTDWSLASTYGKLAIFIFGAWAGASNGGVLVGLAACGVMMSIVST 514

Query: 62   121
           
Sbjct: 520  514

Query: 122  167
           
Sbjct: 580  514

HSP 2 Score: 99.4 bits (246), Expect = 2.7e-20
Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 3


Query: 168 ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGL 227
           ASDL QDFKTGYLTLASPRSMFVSQV+GT MGC+I+PCVFWLFYKAF D+G+
Sbjct: 515 ASDLMQDFKTGYLTLASPRSMFVSQVIGTAMGCVIAPCVFWLFYKAFADIGV 566

Query: 228  287
           
Sbjct: 575  566

Query: 288  324
           
Sbjct: 635  566

[Close]

BLAST of CU119716 vs. TrEMBL
Match: A0A0A0LQZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043160 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-24
Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = 3


Query: 99  GPRVGELLLVYQLVGS**TLSRHASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISP 158
           GP  G ++      G    +   ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISP
Sbjct: 468 GPSRGGIIAGLSACGVMMNIVSTASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISP 527

Query: 159 CVFWLFYKAFDDLGLPTGE 218
           CVFWLFYKAFDDLGLPTGE
Sbjct: 528 CVFWLFYKAFDDLGLPTGE 546

Query: 219  278
           
Sbjct: 588  546

Query: 279  336
           
Sbjct: 648  546

[Close]

BLAST of CU119716 vs. TrEMBL
Match: A0A0A0LQZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043160 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.2e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 2


Query: 2   LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 61
           LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST
Sbjct: 436 LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 490

Query: 62   121
           
Sbjct: 496  490

Query: 122  167
           
Sbjct: 556  490

HSP 2 Score: 111.7 bits (278), Expect = 5.9e-22
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 2


Query: 2   LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 61
           LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAG S+GG+IAGL+ACGVMMNIVST
Sbjct: 425 LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASQGGVIAGLAACGVMMNIVST 479

Query: 62   121
           
Sbjct: 485  479

Query: 122  167
           
Sbjct: 545  479

[Close]

BLAST of CU119716 vs. TrEMBL
Match: M4GQK9_SOYBN (YSL1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.6e-19
Identity = 45/53 (84.91%), Postives = 51/53 (96.23%), Query Frame = 3


Query: 168 ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGLP 227
           ASDLTQDFKTGY+TLASPRSMF+SQV+GT MGC+ISPCVFWLFYKAF +LG+P
Sbjct: 480 ASDLTQDFKTGYMTLASPRSMFLSQVLGTAMGCVISPCVFWLFYKAFGNLGIP 532

Query: 228  287
           
Sbjct: 540  532

Query: 288  327
           
Sbjct: 600  532

HSP 2 Score: 111.7 bits (278), Expect = 5.9e-22
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 2


Query: 2   LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 61
           LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAG S+GG+IAGL+ACGVMMNIVST
Sbjct: 425 LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASQGGVIAGLAACGVMMNIVST 479

Query: 62   121
           
Sbjct: 485  479

Query: 122  167
           
Sbjct: 545  479

[Close]

BLAST of CU119716 vs. TrEMBL
Match: I1LM19_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G203400 PE=4 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 3.6e-19
Identity = 45/53 (84.91%), Postives = 51/53 (96.23%), Query Frame = 3


Query: 168 ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGLP 227
           ASDLTQDFKTGY+TLASPRSMF+SQV+GT MGC+ISPCVFWLFYKAF +LG+P
Sbjct: 480 ASDLTQDFKTGYMTLASPRSMFLSQVLGTAMGCVISPCVFWLFYKAFGNLGIP 532

Query: 228  287
           
Sbjct: 540  532

Query: 288  327
           
Sbjct: 600  532

HSP 2 Score: 111.3 bits (277), Expect = 7.6e-22
Identity = 50/55 (90.91%), Postives = 54/55 (98.18%), Query Frame = 2


Query: 2   LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 61
           LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAG S+GG++AGL+ACGVMMNIVST
Sbjct: 445 LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASKGGVLAGLAACGVMMNIVST 499

Query: 62   121
           
Sbjct: 505  499

Query: 122  167
           
Sbjct: 565  499

[Close]

BLAST of CU119716 vs. TrEMBL
Match: V7C6J6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G138900g PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-18
Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = 3


Query: 168 ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGLPTGE 227
           ASDL QDFKTGYLTLASPRSMFVSQ++GTTMGC++SP VFW+FYKAF DLG  T E
Sbjct: 500 ASDLMQDFKTGYLTLASPRSMFVSQIIGTTMGCVVSPSVFWIFYKAFPDLGKSTSE 555

Query: 228  287
           
Sbjct: 560  555

Query: 288  336
           
Sbjct: 620  555

HSP 2 Score: 111.3 bits (277), Expect = 7.6e-22
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 2


Query: 2   LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGPSRGGIIAGLSACGVMMNIVST 61
           LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAG S GG+IAGL+ACGVMMNIVST
Sbjct: 419 LAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASHGGVIAGLAACGVMMNIVST 473

Query: 62   121
           
Sbjct: 479  473

Query: 122  167
           
Sbjct: 539  473

[Close]

BLAST of CU119716 vs. NCBI nr
Match: gi|778657517|ref|XP_011651033.1| (PREDICTED: probable metal-nicotianamine transporter YSL5 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-25
Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = 3


Query: 99  GPRVGELLLVYQLVGS**TLSRHASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISP 158
           GP  G ++      G    +   ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISP
Sbjct: 468 GPSRGGIIAGLSACGVMMNIVSTASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISP 527

Query: 159 CVFWLFYKAFDDLGLPTGE 218
           CVFWLFYKAFDDLGLPTGE
Sbjct: 528 CVFWLFYKAFDDLGLPTGE 546

Query: 219  278
           
Sbjct: 588  546

Query: 279  336
           
Sbjct: 648  546

[Close]

BLAST of CU119716 vs. NCBI nr
Match: gi|659066967|ref|XP_008436975.1| (PREDICTED: LOW QUALITY PROTEIN: probable metal-nicotianamine transporter YSL5 [Cucumis melo])

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-25
Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = 3


Query: 99  GPRVGELLLVYQLVGS**TLSRHASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISP 158
           GP  G ++      G    +   ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISP
Sbjct: 468 GPSRGGIIAGLSACGVMMNIVSTASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISP 527

Query: 159 CVFWLFYKAFDDLGLPTGE 218
           CVFWLFYKAFDDLGLPTGE
Sbjct: 528 CVFWLFYKAFDDLGLPTGE 546

Query: 219  278
           
Sbjct: 588  546

Query: 279  336
           
Sbjct: 648  546

[Close]

BLAST of CU119716 vs. NCBI nr
Match: gi|702503323|ref|XP_010039025.1| (PREDICTED: probable metal-nicotianamine transporter YSL7 [Eucalyptus grandis])

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-22
Identity = 55/79 (69.62%), Postives = 59/79 (74.68%), Query Frame = 3


Query: 99  GPRVGELLLVYQLVGS**TLSRHASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISP 158
           GP  G +L      G    +   ASDLTQDFKTGYLTLASPRSMFVSQV+GT MGC+ISP
Sbjct: 482 GPSHGGILAGLAACGVMMNIVSTASDLTQDFKTGYLTLASPRSMFVSQVIGTAMGCVISP 541

Query: 159 CVFWLFYKAFDDLGLPTGE 218
           CVFWLFYKAF DLGLP  E
Sbjct: 542 CVFWLFYKAFKDLGLPGSE 560

Query: 219  278
           
Sbjct: 602  560

Query: 279  336
           
Sbjct: 662  560

[Close]

BLAST of CU119716 vs. NCBI nr
Match: gi|729375609|ref|XP_010549025.1| (PREDICTED: probable metal-nicotianamine transporter YSL8 isoform X2 [Tarenaya hassleriana])

HSP 1 Score: 112.5 bits (280), Expect = 4.9e-22
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 3


Query: 168 ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGLPTGE 227
           ASDLTQDFKTGYLTL+SPRSMFVSQV+GT MGC++SPCVFWLFYKAFDDLGLP  E
Sbjct: 77  ASDLTQDFKTGYLTLSSPRSMFVSQVIGTAMGCVVSPCVFWLFYKAFDDLGLPDSE 132

Query: 228  287
           
Sbjct: 137  132

Query: 288  336
           
Sbjct: 197  132

[Close]

BLAST of CU119716 vs. NCBI nr
Match: gi|729375606|ref|XP_010549024.1| (PREDICTED: probable metal-nicotianamine transporter YSL8 isoform X1 [Tarenaya hassleriana])

HSP 1 Score: 112.5 bits (280), Expect = 4.9e-22
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 3


Query: 168 ASDLTQDFKTGYLTLASPRSMFVSQVVGTTMGCIISPCVFWLFYKAFDDLGLPTGE 227
           ASDLTQDFKTGYLTL+SPRSMFVSQV+GT MGC++SPCVFWLFYKAFDDLGLP  E
Sbjct: 499 ASDLTQDFKTGYLTLSSPRSMFVSQVIGTAMGCVVSPCVFWLFYKAFDDLGLPDSE 554

Query: 228  287
           
Sbjct: 559  554

Query: 288  336
           
Sbjct: 619  554

The following BLAST results are available for this feature:

BLAST of CU119716 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YSL7_ARATH	1.2e-23	90.91	Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana GN=YSL7 PE...	[more]
YSL8_ARATH	2.6e-23	85.71	Probable metal-nicotianamine transporter YSL8 OS=Arabidopsis thaliana GN=YSL8 PE...	[more]
YSL5_ARATH	3.4e-23	85.71	Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana GN=YSL5 PE...	[more]
YSL10_ORYSJ	2.4e-21	85.45	Probable metal-nicotianamine transporter YSL10 OS=Oryza sativa subsp. japonica G...	[more]
YSL12_ORYSJ	2.1e-20	81.82	Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica G...	[more]

BLAST of CU119716 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQZ8_CUCSA	1.3e-24	75.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043160 PE=4 SV=1	[more]
A0A0A0LQZ8_CUCSA	8.2e-24	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043160 PE=4 SV=1	[more]
M4GQK9_SOYBN	3.6e-19	84.91	YSL1 OS=Glycine max PE=2 SV=1	[more]
I1LM19_SOYBN	3.6e-19	84.91	Uncharacterized protein OS=Glycine max GN=GLYMA_11G203400 PE=4 SV=2	[more]
V7C6J6_PHAVU	1.3e-18	80.36	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G138900g PE=4 SV=1	[more]

BLAST of CU119716 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778657517\|ref\|XP_011651033.1\|	2.1e-25	75.95	PREDICTED: probable metal-nicotianamine transporter YSL5 [Cucumis sativus]	[more]
gi\|659066967\|ref\|XP_008436975.1\|	2.1e-25	75.95	PREDICTED: LOW QUALITY PROTEIN: probable metal-nicotianamine transporter YSL5 [C...	[more]
gi\|702503323\|ref\|XP_010039025.1\|	2.2e-22	69.62	PREDICTED: probable metal-nicotianamine transporter YSL7 [Eucalyptus grandis]	[more]
gi\|729375609\|ref\|XP_010549025.1\|	4.9e-22	87.50	PREDICTED: probable metal-nicotianamine transporter YSL8 isoform X2 [Tarenaya ha...	[more]
gi\|729375606\|ref\|XP_010549024.1\|	4.9e-22	87.50	PREDICTED: probable metal-nicotianamine transporter YSL8 isoform X1 [Tarenaya ha...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR004813	OPT

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G043160	Csa1G043160	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
G0024962	G0024962	EST
G0112742	G0112742	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004813	Oligopeptide transporter, OPT superfamily	PFAM	PF03169	OPT	coord: 2..110 score: 7.3
None	No IPR available	PANTHER	PTHR31645	FAMILY NOT NAMED	coord: 2..112 score: 2.2