CU119518 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU119518
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGPI-anchored protein-like protein
LocationChr2 : 2632475 .. 2632822 (+)
Sequence length347
The following sequences are available for this feature:

transcribed_cluster sequence

GTTCCTAGTTTTTGATGGGTTCTTCTGTGCATTGAGATGGCTCTCTCTGTCTATTTCTCTGCTTCTAAACACTCTTACACACATAGTTCCATAGTTCCATATCTTTGCAGGGTTCTTTTGTAATCTCACAATTATAATTCTCCCTTATCCATAGACGTTATTTCCCTTATTGCTGCCGCACAAAACCTCACACCCAATTATCCATCATTTGCAGTGAATGAAGACACACTTTTCAAAGCCATGAACAAGTACAGAAGTTCCAAAGAACTTACACCCATGCATAGGAACTCAAAAGCAGACTGCCTCGTCAAGCAAATTGCTTGGGACTTAGACGATCAGTCGCCCCT
BLAST of CU119518 vs. TrEMBL
Match: A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-13
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 214 VNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSP 273
           VNEDTLFKAMN YRSSKELTPM+RNSKADC VKQIAWD DDQ P
Sbjct: 238 VNEDTLFKAMNIYRSSKELTPMNRNSKADCFVKQIAWDFDDQLP 281

Query: 274 333
           
Sbjct: 298 281

Query: 334 346
           
Sbjct: 358 281

BLAST of CU119518 vs. TrEMBL
Match: A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 39.3 bits (90), Expect = 3.8e+00
Identity = 19/44 (43.18%), Postives = 29/44 (65.91%), Query Frame = 1

Query: 214 VNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSP 273
           V+ + LFK  N YR+SK+ + + +NSKA C+ +QIA +   Q P
Sbjct: 28  VDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYSQLP 71

Query: 274 333
           
Sbjct: 88  71

Query: 334 346
           
Sbjct: 148 71


HSP 2 Score: 77.4 bits (189), Expect = 1.3e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 1

Query: 241 MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSP 300
           MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSP
Sbjct: 1   MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSP 35

Query: 301 346
           
Sbjct: 61  35

BLAST of CU119518 vs. NCBI nr
Match: gi|150036257|gb|ABR67420.1| (GPI-anchored protein-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-13
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 214 VNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSP 273
           VNEDTLFKAMN YRSSKELTPM+RNSKADC VKQIAWD DDQ P
Sbjct: 238 VNEDTLFKAMNIYRSSKELTPMNRNSKADCFVKQIAWDFDDQLP 281

Query: 274 333
           
Sbjct: 298 281

Query: 334 346
           
Sbjct: 358 281

BLAST of CU119518 vs. NCBI nr
Match: gi|659070382|ref|XP_008454803.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo])

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-13
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 214 VNEDTLFKAMNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSP 273
           VNEDTLFKAMN YRSSKELTPM+RNSKADC VKQIAWD DDQ P
Sbjct: 71  VNEDTLFKAMNIYRSSKELTPMNRNSKADCFVKQIAWDFDDQLP 114

Query: 274 333
           
Sbjct: 131 114

Query: 334 346
           
Sbjct: 191 114

BLAST of CU119518 vs. NCBI nr
Match: gi|700205775|gb|KGN60894.1| (hypothetical protein Csa_2G021650 [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 1

Query: 241 MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSP 300
           MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSP
Sbjct: 1   MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSP 35

Query: 301 346
           
Sbjct: 61  35

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A6YTC6_CUCME1.8e-1388.64GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A6YTC6_CUCME3.8e+0043.18GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|150036257|gb|ABR67420.1|2.5e-1388.64GPI-anchored protein-like protein [Cucumis melo subsp. melo][more]
gi|659070382|ref|XP_008454803.1|2.5e-1388.64PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo][more]
gi|700205775|gb|KGN60894.1|1.8e-11100.00hypothetical protein Csa_2G021650 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G021650Csa2G021650gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02N1COAFKNP3UI02N1COAEST
H0103623H0103623EST