CU119131 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU119131
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPeroxidase
LocationChr4 : 11033719 .. 11033964 (-)
Sequence length253
The following sequences are available for this feature:

transcribed_cluster sequence

AACCAATCTGATTTCTTCGCTCAGTTTAGGTCAGTCAATGATAAATATGGGGAACATTCAACCGTTAGTGGCACCGGCGGGAGAAATCAGGACCAATTGTAGGCGTGTTAATCCTACTTCTACTGCTGCTGGTACTGCTGTTATGTAACTGCTAATTTATTTTACCATATGGAAACACTTCATATATGTTTTATGTTAACCAACGCTGGCCCTTTCTCTTCTTTCTGTCTTTTCTTTTCTTCTATTTCTTGCG
BLAST of CU119131 vs. Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 6.3e-06
Identity = 23/30 (76.67%), Postives = 23/30 (76.67%), Query Frame = 2

Query: 23  SLGQSMINMGNIQPLVAPAGEIRTNCRRVN 82
           S GQSMINMGNIQPL    GEIR+NCRR+N
Sbjct: 263 SFGQSMINMGNIQPLTGNQGEIRSNCRRLN 292

Query: 83  113
           
Sbjct: 323 292

BLAST of CU119131 vs. TrEMBL
Match: A0A0A0KWW5_CUCSA (Peroxidase OS=Cucumis sativus GN=Csa_4G285810 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-12
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 2

Query: 29  GQSMINMGNIQPLVAPAGEIRTNCRRVNPTSTAAGTAVM 88
           GQSMINMGNIQPLVAPAGEIRTNCRRVNPT+TAAGTAVM
Sbjct: 296 GQSMINMGNIQPLVAPAGEIRTNCRRVNPTTTAAGTAVM 334

Query: 89  146
           
Sbjct: 356 334

BLAST of CU119131 vs. NCBI nr
Match: gi|449448986|ref|XP_004142246.1| (PREDICTED: peroxidase 2-like [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-12
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 2

Query: 29  GQSMINMGNIQPLVAPAGEIRTNCRRVNPTSTAAGTAVM 88
           GQSMINMGNIQPLVAPAGEIRTNCRRVNPT+TAAGTAVM
Sbjct: 296 GQSMINMGNIQPLVAPAGEIRTNCRRVNPTTTAAGTAVM 334

Query: 89  146
           
Sbjct: 356 334

BLAST of CU119131 vs. NCBI nr
Match: gi|659097707|ref|XP_008449770.1| (PREDICTED: peroxidase 2-like [Cucumis melo])

HSP 1 Score: 72.0 bits (175), Expect = 5.5e-10
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 2

Query: 29  GQSMINMGNIQPLVAPAGEIRTNCRRVNP-TSTAAGTAVM 88
           GQSMINMGN+QPL+APAGEIRTNCRRVNP T+T AGTAVM
Sbjct: 296 GQSMINMGNLQPLLAPAGEIRTNCRRVNPTTTTTAGTAVM 335

Query: 89  146
           
Sbjct: 356 335

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PER2_CUCSA6.3e-0676.67Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KWW5_CUCSA1.4e-1297.44Peroxidase OS=Cucumis sativus GN=Csa_4G285810 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|449448986|ref|XP_004142246.1|2.0e-1297.44PREDICTED: peroxidase 2-like [Cucumis sativus][more]
gi|659097707|ref|XP_008449770.1|5.5e-1087.50PREDICTED: peroxidase 2-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G285810Csa4G285810gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0003341H0003341EST
H0006949H0006949EST