CU118882 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU118882
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 15348547 .. 15349737 (-)
Sequence length264
The following sequences are available for this feature:

transcribed_cluster sequence

AATTGAAGCTTTCTTCTCAGACTCATAATCGACTTCAAAGTCACAGCTGAATTCCCATTTGGGCTCTCCATGAGAAGCGACGGAAGCTGTGGGAGTCATTGCTTCAATTCTAATGAAAAACAGCCAGATTTCCCCCCACAAATAAACCGGTAACGGCAGCGGGTAGTAGGAGGCGTGGCGAGGATGGTCGGCGGCGAGGCTGAGGCGTGGCAGTGGAAGAAATGGGGAAGAAGTTGAGACCGTGACTCGTTGAAGACGAAGACC
BLAST of CU118882 vs. TrEMBL
Match: A0A0A0L7A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238730 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.1e-31
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = -1

Query: 1   AADHPRHASYYPLPLPVYLWGEIWLFFIRIEAMTPTASVASHGEPKWEFSCDFEVDYESE 60
           AADHPRHASYYPLPLPVYLWGEIWLFFIRIEAMTPTASVASHGEPKWEFSCDFEVDYESE
Sbjct: 27  AADHPRHASYYPLPLPVYLWGEIWLFFIRIEAMTPTASVASHGEPKWEFSCDFEVDYESE 86

Query: 61  KKASI 120
           KKASI
Sbjct: 87  KKASI 91

Query: 121 180
           
Sbjct: 147 91

Query: 181 196
           
Sbjct: 207 91

BLAST of CU118882 vs. TrEMBL
Match: A0A0A0L7A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238730 PE=4 SV=1)

HSP 1 Score: 30.8 bits (68), Expect = 1.0e+03
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = -3

Query: 224 SSSSTSHGLNFFP 263
           SSSSTSHGLNFFP
Sbjct: 5   SSSSTSHGLNFFP 17

BLAST of CU118882 vs. NCBI nr
Match: gi|700202525|gb|KGN57658.1| (hypothetical protein Csa_3G238730 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 9.2e-32
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = -1

Query: 1   AADHPRHASYYPLPLPVYLWGEIWLFFIRIEAMTPTASVASHGEPKWEFSCDFEVDYESE 60
           AADHPRHASYYPLPLPVYLWGEIWLFFIRIEAMTPTASVASHGEPKWEFSCDFEVDYESE
Sbjct: 27  AADHPRHASYYPLPLPVYLWGEIWLFFIRIEAMTPTASVASHGEPKWEFSCDFEVDYESE 86

Query: 61  KKASI 120
           KKASI
Sbjct: 87  KKASI 91

Query: 121 180
           
Sbjct: 147 91

Query: 181 196
           
Sbjct: 207 91

BLAST of CU118882 vs. NCBI nr
Match: gi|449456983|ref|XP_004146228.1| (PREDICTED: uncharacterized protein LOC101217139 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-10
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = -1

Query: 1   MTPTASVASHGEPKWEFSCDFEVDYESEKKASI 60
           MTPTASVASHGEPKWEFSCDFEVDYESEKKASI
Sbjct: 1   MTPTASVASHGEPKWEFSCDFEVDYESEKKASI 33

Query: 61  100
           
Sbjct: 61  33

BLAST of CU118882 vs. NCBI nr
Match: gi|659133652|ref|XP_008466840.1| (PREDICTED: uncharacterized protein LOC103504146 [Cucumis melo])

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-08
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = -1

Query: 1   MTPTASVASHGEPKWEFSCDFEVDYESEKKASI 60
           MTPTASVAS GE KWEFSCDFEVDYESEKKASI
Sbjct: 1   MTPTASVASDGEAKWEFSCDFEVDYESEKKASI 33

Query: 61  100
           
Sbjct: 61  33

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L7A2_CUCSA1.1e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238730 PE=4 SV=1[more]
A0A0A0L7A2_CUCSA1.0e+03100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238730 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202525|gb|KGN57658.1|9.2e-32100.00hypothetical protein Csa_3G238730 [Cucumis sativus][more]
gi|449456983|ref|XP_004146228.1|2.0e-10100.00PREDICTED: uncharacterized protein LOC101217139 [Cucumis sativus][more]
gi|659133652|ref|XP_008466840.1|1.9e-0893.94PREDICTED: uncharacterized protein LOC103504146 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G238730Csa3G238730gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0059500G0059500EST
H0179619H0179619EST