CU118505 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU118505
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr6 : 16223629 .. 16226882 (-)
Sequence length	310

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TGTCTTTTGTATACCCTCCTGAAGTGAAACAATGGGGGTGTAGAAAAGTCGATCCTTGGCCTTTGAGGAATTAAAAGTTCTACAACAAGAGAGAAGTCTTATACGGGAAGGTGTGAACTGTGGGACAGGCATCCCATAAGGACCTAAAAGCTTGTAAGTCCAGTGCACCATATGTGCAATTGGCATCACTATGCAGGCAGGGATCTTTATTCTTGGCCTTTCGTAGCCAAGACCATCCAGAATAAGAGAGACAAACTCCCAGAACTTGATGGGTTCCATGTTGGTTATGAAATAAGCCTGCCCTGCAGCT

Library


Library category	ESTs
fruit (8DPP) library	1
gynoecious flower library	1

Homology

[Close]

BLAST of CU118505 vs. Swiss-Prot
Match: HSDD2_ARATH (3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 1.1e-41
Identity = 80/102 (78.43%), Postives = 89/102 (87.25%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           AAGQAYFITNMEPIKFWEF+S +LDGLGYERP IKIPA I+MPIAH+V  TYK+LGPYGM
Sbjct: 252 AAGQAYFITNMEPIKFWEFMSQLLDGLGYERPSIKIPAFIMMPIAHLVELTYKVLGPYGM 311

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
            VPQ TPSR+RLLSC RTF+S+KAKDRL Y P+V LQEGI++
Sbjct: 312 TVPQLTPSRVRLLSCSRTFDSTKAKDRLGYAPVVPLQEGIRR 353

Query: 124  183
           
Sbjct: 372  353

Query: 184  243
           
Sbjct: 432  353

Query: 244  303
           
Sbjct: 492  353

Query: 304  310
           
Sbjct: 552  353

[Close]

BLAST of CU118505 vs. Swiss-Prot
Match: HSDD1_ARATH (3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 OS=Arabidopsis thaliana GN=3BETAHSD/D1 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.4e-39
Identity = 77/102 (75.49%), Postives = 88/102 (86.27%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           AAGQAYFITNMEPIKFWEF+S +L+GLGYERP IKIPA ++MPIA++V   YKLLGPYGM
Sbjct: 252 AAGQAYFITNMEPIKFWEFMSQLLEGLGYERPSIKIPASLMMPIAYLVELAYKLLGPYGM 311

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
            VP  TPSR+RLLSC RTF+SSKAKDRL Y+P+V LQEGI++
Sbjct: 312 KVPVLTPSRVRLLSCNRTFDSSKAKDRLGYSPVVPLQEGIKR 353

Query: 124  183
           
Sbjct: 372  353

Query: 184  243
           
Sbjct: 432  353

Query: 244  303
           
Sbjct: 492  353

Query: 304  310
           
Sbjct: 552  353

[Close]

BLAST of CU118505 vs. Swiss-Prot
Match: HSDD3_ARATH (3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 7.5e-17
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = -2


Query: 10  AGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGMP 69
           AG+ +FITN++P++FW+FVS I++GLGY RP IK+P  +V+ +  ++ WT++     G+ 
Sbjct: 251 AGKEFFITNLKPVRFWDFVSHIVEGLGYPRPSIKLPVRLVLYVFSLLKWTHE---KEGLG 310

Query: 70  VPQFTPSRIRLL-SCCRTFNSSKAKDRLFYTPIVSLQEGI 129
               T  +  LL S  RTFN + AK  L YTP+V+L++GI
Sbjct: 311 SNYDTAHQYALLASSTRTFNCNAAKKHLGYTPVVTLEDGI 347

Query: 130  189
           
Sbjct: 371  347

Query: 190  249
           
Sbjct: 431  347

Query: 250  307
           
Sbjct: 491  347

[Close]

BLAST of CU118505 vs. Swiss-Prot
Match: NSDHL_BOVIN (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos taurus GN=NSDHL PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 8.6e-13
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = -2


Query: 4   GQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGMPV 63
           G+A+ ITN EPI FW F+S IL GL YE P+  IP  +   +A +V     ++ P     
Sbjct: 245 GKAFHITNDEPIPFWTFLSRILTGLNYEAPKYHIPYWLAYYLALLVSLLVMVISPVIQLQ 304

Query: 64  PQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
           P FTP R+ L      ++  KAK  + Y P+V++ + + K
Sbjct: 305 PTFTPMRVALAGTFHYYSCEKAKKLMGYRPLVTMDDAVDK 344

Query: 124  183
           
Sbjct: 365  344

Query: 184  243
           
Sbjct: 425  344

Query: 244  303
           
Sbjct: 485  344

[Close]

BLAST of CU118505 vs. Swiss-Prot
Match: NSDHL_MOUSE (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Mus musculus GN=Nsdhl PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-12
Identity = 36/100 (36.00%), Postives = 53/100 (53.00%), Query Frame = -2


Query: 4   GQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGMPV 63
           G+A+ ITN EPI FW F+S IL GL YE P+  IP  +   +A ++     ++ P     
Sbjct: 251 GKAFHITNDEPIPFWTFLSRILTGLNYEAPKYHIPYWMAYYLAFLLSLLVMVVSPLIQIQ 310

Query: 64  PQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
           P FTP R+ L      ++  KAK    Y P+V++ E +++
Sbjct: 311 PTFTPIRVALAGTFHYYSCEKAKKLFGYRPLVTMDEAVER 350

Query: 124  183
           
Sbjct: 371  350

Query: 184  243
           
Sbjct: 431  350

Query: 244  303
           
Sbjct: 491  350

[Close]

BLAST of CU118505 vs. TrEMBL
Match: A0A0A0KDI8_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_6G361340 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.6e-53
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM
Sbjct: 248 AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 307

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
           PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK
Sbjct: 308 PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 349

Query: 124  183
           
Sbjct: 368  349

Query: 184  243
           
Sbjct: 428  349

Query: 244  303
           
Sbjct: 488  349

Query: 304  310
           
Sbjct: 548  349

[Close]

BLAST of CU118505 vs. TrEMBL
Match: F6H2U3_VITVI (Reticulon-like protein OS=Vitis vinifera GN=VIT_04s0008g02200 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 5.5e-43
Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           AAGQAYFITNMEPIKFWEFVSLIL+GLGYERPRIKIPA ++MPIAHMV WTYK+L PYGM
Sbjct: 225 AAGQAYFITNMEPIKFWEFVSLILEGLGYERPRIKIPALVMMPIAHMVEWTYKMLAPYGM 284

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
            VPQ TPSRIRLLSC RTF+ SKAKD+L YTPIVSLQEG+++
Sbjct: 285 KVPQLTPSRIRLLSCSRTFSCSKAKDQLSYTPIVSLQEGLRR 326

Query: 124  183
           
Sbjct: 345  326

Query: 184  243
           
Sbjct: 405  326

Query: 244  303
           
Sbjct: 465  326

Query: 304  310
           
Sbjct: 525  326

[Close]

BLAST of CU118505 vs. TrEMBL
Match: M5XD85_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005834mg PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-42
Identity = 84/102 (82.35%), Postives = 94/102 (92.16%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           AAGQAYFITNMEPIKFWEFVSLIL+GLGYERPRIKIPA +VMPIAH+V WTYKLLGPYGM
Sbjct: 248 AAGQAYFITNMEPIKFWEFVSLILEGLGYERPRIKIPAFVVMPIAHVVEWTYKLLGPYGM 307

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
            VPQ TPSR+RLLSC R+F  SKA+DR+ YTPIVSLQEG+++
Sbjct: 308 KVPQLTPSRVRLLSCSRSFKCSKAQDRIGYTPIVSLQEGLKR 349

Query: 124  183
           
Sbjct: 368  349

Query: 184  243
           
Sbjct: 428  349

Query: 244  303
           
Sbjct: 488  349

Query: 304  310
           
Sbjct: 548  349

[Close]

BLAST of CU118505 vs. TrEMBL
Match: W9RHP9_9ROSA (Reticulon-like protein OS=Morus notabilis GN=L484_018626 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-41
Identity = 81/102 (79.41%), Postives = 95/102 (93.14%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           A+GQAYFITNMEPIKFWEF+SLIL+GLGYERP+IKIPA ++MPIAH+V WTYKLLGPYGM
Sbjct: 248 ASGQAYFITNMEPIKFWEFMSLILEGLGYERPKIKIPAFVMMPIAHIVEWTYKLLGPYGM 307

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
            VPQ TPSRIRLLSC R+FN SKAKDRL Y+PIV+L+EG+++
Sbjct: 308 KVPQLTPSRIRLLSCSRSFNCSKAKDRLGYSPIVTLEEGLKR 349

Query: 124  183
           
Sbjct: 368  349

Query: 184  243
           
Sbjct: 428  349

Query: 244  303
           
Sbjct: 488  349

Query: 304  310
           
Sbjct: 548  349

[Close]

BLAST of CU118505 vs. TrEMBL
Match: A0A0K9RLP4_SPIOL (Reticulon-like protein OS=Spinacia oleracea GN=SOVF_052550 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-41
Identity = 83/102 (81.37%), Postives = 94/102 (92.16%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           A+GQAYFITNMEPIKFWEF+SLIL+GLGYERPRIKIPA ++MPIAH+V + YKLL PYGM
Sbjct: 248 ASGQAYFITNMEPIKFWEFMSLILEGLGYERPRIKIPAFVMMPIAHLVEFVYKLLAPYGM 307

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
            VPQ TPSRIRLLSC RTFNSSKAKD+L YTPIVSLQEG+++
Sbjct: 308 KVPQLTPSRIRLLSCNRTFNSSKAKDQLGYTPIVSLQEGLER 349

Query: 124  183
           
Sbjct: 368  349

Query: 184  243
           
Sbjct: 428  349

Query: 244  303
           
Sbjct: 488  349

Query: 304  310
           
Sbjct: 548  349

[Close]

BLAST of CU118505 vs. NCBI nr
Match: gi|778715197|ref|XP_011657360.1| (PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 2.6e-54
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM
Sbjct: 248 AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 307

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
           PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK
Sbjct: 308 PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 349

Query: 124  183
           
Sbjct: 368  349

Query: 184  243
           
Sbjct: 428  349

Query: 244  303
           
Sbjct: 488  349

Query: 304  310
           
Sbjct: 548  349

[Close]

BLAST of CU118505 vs. NCBI nr
Match: gi|659089513|ref|XP_008445550.1| (PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 isoform X1 [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 3.8e-53
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMV+WTYKLLGPYGM
Sbjct: 248 AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVNWTYKLLGPYGM 307

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
           PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQ+
Sbjct: 308 PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQR 349

Query: 124  183
           
Sbjct: 368  349

Query: 184  243
           
Sbjct: 428  349

Query: 244  303
           
Sbjct: 488  349

Query: 304  310
           
Sbjct: 548  349

[Close]

BLAST of CU118505 vs. NCBI nr
Match: gi|659089515|ref|XP_008445551.1| (PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 isoform X2 [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 3.8e-53
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMV+WTYKLLGPYGM
Sbjct: 248 AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVNWTYKLLGPYGM 307

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
           PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQ+
Sbjct: 308 PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQR 349

Query: 124  183
           
Sbjct: 368  349

Query: 184  243
           
Sbjct: 428  349

Query: 244  303
           
Sbjct: 488  349

Query: 304  310
           
Sbjct: 548  349

[Close]

BLAST of CU118505 vs. NCBI nr
Match: gi|296081738|emb|CBI20743.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 185.3 bits (469), Expect = 5.5e-44
Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           AAGQAYFITNMEPIKFWEFVSLIL+GLGYERPRIKIPA ++MPIAHMV WTYK+L PYGM
Sbjct: 225 AAGQAYFITNMEPIKFWEFVSLILEGLGYERPRIKIPALVMMPIAHMVEWTYKMLAPYGM 284

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
            VPQ TPSRIRLLSC RTF+ SKAKD+L YTPIVSLQEG+++
Sbjct: 285 KVPQLTPSRIRLLSCSRTFSCSKAKDQLSYTPIVSLQEGLRR 326

Query: 124  183
           
Sbjct: 345  326

Query: 184  243
           
Sbjct: 405  326

Query: 244  303
           
Sbjct: 465  326

Query: 304  310
           
Sbjct: 525  326

[Close]

BLAST of CU118505 vs. NCBI nr
Match: gi|359476293|ref|XP_002282161.2| (PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Vitis vinifera])

HSP 1 Score: 185.3 bits (469), Expect = 5.5e-44
Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = -2


Query: 4   AAGQAYFITNMEPIKFWEFVSLILDGLGYERPRIKIPACIVMPIAHMVHWTYKLLGPYGM 63
           AAGQAYFITNMEPIKFWEFVSLIL+GLGYERPRIKIPA ++MPIAHMV WTYK+L PYGM
Sbjct: 248 AAGQAYFITNMEPIKFWEFVSLILEGLGYERPRIKIPALVMMPIAHMVEWTYKMLAPYGM 307

Query: 64  PVPQFTPSRIRLLSCCRTFNSSKAKDRLFYTPIVSLQEGIQK 123
            VPQ TPSRIRLLSC RTF+ SKAKD+L YTPIVSLQEG+++
Sbjct: 308 KVPQLTPSRIRLLSCSRTFSCSKAKDQLSYTPIVSLQEGLRR 349

Query: 124  183
           
Sbjct: 368  349

Query: 184  243
           
Sbjct: 428  349

Query: 244  303
           
Sbjct: 488  349

Query: 304  310
           
Sbjct: 548  349

The following BLAST results are available for this feature:

BLAST of CU118505 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSDD2_ARATH	1.1e-41	78.43	3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 OS=Arabidopsis thalia...	[more]
HSDD1_ARATH	1.4e-39	75.49	3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 OS=Arabidopsis thalia...	[more]
HSDD3_ARATH	7.5e-17	44.00	3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 OS=Arabidopsis thalia...	[more]
NSDHL_BOVIN	8.6e-13	37.00	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos taurus GN=NSD...	[more]
NSDHL_MOUSE	2.5e-12	36.00	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Mus musculus GN=N...	[more]

BLAST of CU118505 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDI8_CUCSA	2.6e-53	100.00	Reticulon-like protein OS=Cucumis sativus GN=Csa_6G361340 PE=3 SV=1	[more]
F6H2U3_VITVI	5.5e-43	83.33	Reticulon-like protein OS=Vitis vinifera GN=VIT_04s0008g02200 PE=3 SV=1	[more]
M5XD85_PRUPE	1.2e-42	82.35	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005834mg PE=3 SV=1	[more]
W9RHP9_9ROSA	1.4e-41	79.41	Reticulon-like protein OS=Morus notabilis GN=L484_018626 PE=3 SV=1	[more]
A0A0K9RLP4_SPIOL	3.0e-41	81.37	Reticulon-like protein OS=Spinacia oleracea GN=SOVF_052550 PE=3 SV=1	[more]

BLAST of CU118505 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778715197\|ref\|XP_011657360.1\|	2.6e-54	100.00	PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 [Cucumis s...	[more]
gi\|659089513\|ref\|XP_008445550.1\|	3.8e-53	98.04	PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 isoform X1...	[more]
gi\|659089515\|ref\|XP_008445551.1\|	3.8e-53	98.04	PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 isoform X2...	[more]
gi\|296081738\|emb\|CBI20743.3\|	5.5e-44	83.33	unnamed protein product [Vitis vinifera]	[more]
gi\|359476293\|ref\|XP_002282161.2\|	5.5e-44	83.33	PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Vitis vin...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR002225	3Beta_OHSteriod_DH/Estase
IPR016040	NAD(P)-bd_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006694	steroid biosynthetic process
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006694	steroid biosynthetic process
molecular_function	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G361340	Csa6G361340	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02L1U0I	FKNP3UI02L1U0I	EST
G0082366	G0082366	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002225	3-beta hydroxysteroid dehydrogenase/isomerase	PFAM	PF01073	3Beta_HSD	coord: 2..38 score: 3.
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 3..104 score: 1.
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 3..104 score: 5.
None	No IPR available	PANTHER	PTHR10366	NAD DEPENDENT EPIMERASE/DEHYDRATASE	coord: 64..104 score: 9.8E-37coord: 2..40 score: 9.8
None	No IPR available	PANTHER	PTHR10366:SF471	SUBFAMILY NOT NAMED	coord: 64..104 score: 9.8E-37coord: 2..40 score: 9.8