CU118378 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU118378
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGlycosyl hydrolase family 5 protein
LocationChr3 : 13081666 .. 13081866 (-)
Sequence length204
The following sequences are available for this feature:

transcribed_cluster sequence

AAACTTGTGTGTGTGAATTGGCCTTCCCACACACAGAGCATGTTGGCAGAAGGCCTCAACCATAGGCCATTAAAAGAACCTAGCAGACGAGGCGATCAAGTTAAGATTTAATTGTGTACGACTCACATATGCAACTCATATGTTCACTCGCTATGCAAATAGGACGGTTGAGGAAAACTTTGATCTTCTTGATTTAAAAACAAG
BLAST of CU118378 vs. TrEMBL
Match: A0A0A0K853_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G028440 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 4.6e-14
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2

Query: 74  KNLADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLK 133
           K LADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDL+
Sbjct: 68  KELADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLE 109

Query: 134 193
           
Sbjct: 128 109

Query: 194 200
           
Sbjct: 188 109

BLAST of CU118378 vs. TrEMBL
Match: A0A0A0K853_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G028440 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.7e-06
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 1

Query: 1  KLVCVNWPSHTQSMLAEGLNHRPLKE 60
          KLVCVNWPSHTQSML EGLNHRPLKE
Sbjct: 44 KLVCVNWPSHTQSMLIEGLNHRPLKE 69

Query: 61 79
          
Sbjct: 104 69


HSP 2 Score: 80.5 bits (197), Expect = 8.6e-13
Identity = 36/42 (85.71%), Postives = 41/42 (97.62%), Query Frame = 2

Query: 74  KNLADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLK 133
           K+LA+E ++LRFNCVRLTYATHMFTRYANRTVEENFDLLDL+
Sbjct: 68  KDLANEVVRLRFNCVRLTYATHMFTRYANRTVEENFDLLDLR 109

Query: 134 193
           
Sbjct: 128 109

Query: 194 200
           
Sbjct: 188 109

BLAST of CU118378 vs. TrEMBL
Match: A0A0A0KN72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168955 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.3e-04
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 1

Query: 1  KLVCVNWPSHTQSMLAEGLNHRPLKE 60
          KLVCVNWPSHTQSML EGL+ RPLK+
Sbjct: 44 KLVCVNWPSHTQSMLIEGLDRRPLKD 69

Query: 61 79
          
Sbjct: 104 69


HSP 2 Score: 59.7 bits (143), Expect = 1.6e-06
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 2

Query: 77  NLADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLK 136
           ++A   +KLRFNCVRLTY+ HMFTRYAN TV+++F+  DLK
Sbjct: 69  DIAAMVVKLRFNCVRLTYSIHMFTRYANLTVKQSFENFDLK 109

Query: 137 196
           
Sbjct: 129 109

Query: 197 200
           
Sbjct: 189 109

BLAST of CU118378 vs. TrEMBL
Match: A0A0A0L8X0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186170 PE=4 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 2.0e-01
Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = 1

Query: 1  KLVCVNWPSHTQSMLAEGLNHRPLKE 60
          KL+CVNWP H Q+M+AEGL+ +PL +
Sbjct: 44 KLICVNWPGHMQAMVAEGLHLKPLDD 69

Query: 61 79
          
Sbjct: 104 69

BLAST of CU118378 vs. NCBI nr
Match: gi|659074661|ref|XP_008437725.1| (PREDICTED: uncharacterized protein LOC103483072 [Cucumis melo])

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-14
Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 2

Query: 74  KNLADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLK 133
           K+LADEAIKLRFNCVRLTYATHMFTRYANRT+EENFDLLDLK
Sbjct: 67  KDLADEAIKLRFNCVRLTYATHMFTRYANRTIEENFDLLDLK 108

Query: 134 193
           
Sbjct: 127 108

Query: 194 200
           
Sbjct: 187 108

BLAST of CU118378 vs. NCBI nr
Match: gi|778721997|ref|XP_011658389.1| (PREDICTED: uncharacterized protein LOC101207450 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 3.0e-14
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 2

Query: 74  KNLADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLK 133
           K LADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDL+
Sbjct: 68  KELADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLE 109

Query: 134 193
           
Sbjct: 128 109

Query: 194 200
           
Sbjct: 188 109

BLAST of CU118378 vs. NCBI nr
Match: gi|449451950|ref|XP_004143723.1| (PREDICTED: uncharacterized protein LOC101213113 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 5.6e-13
Identity = 36/42 (85.71%), Postives = 41/42 (97.62%), Query Frame = 2

Query: 74  KNLADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLK 133
           K+LA+E ++LRFNCVRLTYATHMFTRYANRTVEENFDLLDL+
Sbjct: 68  KDLANEVVRLRFNCVRLTYATHMFTRYANRTVEENFDLLDLR 109

Query: 134 193
           
Sbjct: 128 109

Query: 194 200
           
Sbjct: 188 109

BLAST of CU118378 vs. NCBI nr
Match: gi|700195182|gb|KGN50359.1| (hypothetical protein Csa_5G168955 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 5.6e-13
Identity = 36/42 (85.71%), Postives = 41/42 (97.62%), Query Frame = 2

Query: 74  KNLADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLK 133
           K+LA+E ++LRFNCVRLTYATHMFTRYANRTVEENFDLLDL+
Sbjct: 68  KDLANEVVRLRFNCVRLTYATHMFTRYANRTVEENFDLLDLR 109

Query: 134 193
           
Sbjct: 128 109

Query: 194 200
           
Sbjct: 188 109

BLAST of CU118378 vs. NCBI nr
Match: gi|659073199|ref|XP_008467306.1| (PREDICTED: uncharacterized protein LOC103504686 [Cucumis melo])

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-12
Identity = 35/42 (83.33%), Postives = 41/42 (97.62%), Query Frame = 2

Query: 74  KNLADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLK 133
           K+LA+E ++L+FNCVRLTYATHMFTRYANRTVEENFDLLDL+
Sbjct: 68  KDLANEVMRLKFNCVRLTYATHMFTRYANRTVEENFDLLDLR 109

Query: 134 193
           
Sbjct: 128 109

Query: 194 200
           
Sbjct: 188 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K853_CUCSA4.6e-1495.24Uncharacterized protein OS=Cucumis sativus GN=Csa_6G028440 PE=3 SV=1[more]
A0A0A0K853_CUCSA4.7e-0696.15Uncharacterized protein OS=Cucumis sativus GN=Csa_6G028440 PE=3 SV=1[more]
A0A0A0KN72_CUCSA3.3e-0484.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168955 PE=4 SV=1[more]
A0A0A0L8X0_CUCSA2.0e-0161.54Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186170 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659074661|ref|XP_008437725.1|1.0e-1495.24PREDICTED: uncharacterized protein LOC103483072 [Cucumis melo][more]
gi|778721997|ref|XP_011658389.1|3.0e-1495.24PREDICTED: uncharacterized protein LOC101207450 [Cucumis sativus][more]
gi|449451950|ref|XP_004143723.1|5.6e-1385.71PREDICTED: uncharacterized protein LOC101213113 [Cucumis sativus][more]
gi|700195182|gb|KGN50359.1|5.6e-1385.71hypothetical protein Csa_5G168955 [Cucumis sativus][more]
gi|659073199|ref|XP_008467306.1|2.1e-1283.33PREDICTED: uncharacterized protein LOC103504686 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G186670Csa3G186670gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0002317H0002317EST
H0002913H0002913EST